BP921052
Clone id YMU001_000145_A03
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAATCAAGCATTAGCAATGGGCATCCAATTGGATTTTCGAAACTCTTCTCATGCTGTTCT
GCAATGATTACTCGAAAGTTTGTATGACCAATTCTGGTTGGGCTCATTTCCACCAAGGTT
AGCCAAGCTAAAAAGGACTAATGTCATCCATCCAATATATCTTCGTAGCGACTCTCAACG
ACAAGCTGTTGTTCTACTTCAGCTGCTTCTTTATGGCTAAGTTGACTTTACTATCTACCA
GCAGTTTGAAAGCTCCACCCACCTCATGGATGAACGGCGTCAAATTCAGACCAAGTTATA
TACAACATGGTAGTATTCATGCTTACTACAACATATTCAATGCCACCTGACTGAGACAAA
CCAAACTGAAACGGCAAGGCCTGAAAGCTACATTTCTTCCTTTCAGTTAACACAAAGACT
CGAAAAAGCTTCCTCAAAAGCCCTCCGACGACTCAATTCAGGGGTCCATCCTCCTGCTCT
TGCACCTTTTTCTTTTCACAACTTCTTTGTTTCCTCATCCTCGACCAGCCCTTCACGGTC
ATGACTACTCGAAGC
■■Homology search results ■■ -
sp_hit_id P33474
Definition sp|P33474|VP3_EHDVA Core protein VP3 OS=Epizootic hemorrhagic disease virus 2 (strain Australia)
Align length 55
Score (bit) 32.0
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921052|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_A03.
(555 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P33474|VP3_EHDVA Core protein VP3 OS=Epizootic hemorrhagic di... 32 2.1
sp|P20608|VP3_BTV1A Core protein VP3 OS=Bluetongue virus 1 (isol... 31 3.5
sp|P27281|VP3_EHDV1 Core protein VP3 OS=Epizootic hemorrhagic di... 31 4.6
sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1,... 30 6.0

>sp|P33474|VP3_EHDVA Core protein VP3 OS=Epizootic hemorrhagic
disease virus 2 (strain Australia) GN=S3 PE=3 SV=1
Length = 899

Score = 32.0 bits (71), Expect = 2.1
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2

Query: 446 GGLLRKLFRVFVLTERKKCSFQALPFQFGLSQSGGIEYVVV--SMNTTMLYITWS 288
GG+LR + F + + QALPF + S+ GG+ Y + + +TT+ Y+ ++
Sbjct: 773 GGVLRTVRVKFFDSRPPEEILQALPFDYQTSEKGGLTYATIKYANDTTIYYLIYN 827


>sp|P20608|VP3_BTV1A Core protein VP3 OS=Bluetongue virus 1 (isolate
Australia) GN=S3 PE=3 SV=1
Length = 901

Score = 31.2 bits (69), Expect = 3.5
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2

Query: 446 GGLLRKLFRVFVLTERKKCSFQALPFQFGLSQSGGIEYVVV--SMNTTMLYITWS 288
GG+LR + FV Q LPF + ++ GG+ Y + + TT+ Y+ ++
Sbjct: 775 GGVLRTVRVKFVDARPPDDVLQGLPFSYDTNEKGGLAYATIKYATETTIFYLIYN 829


>sp|P27281|VP3_EHDV1 Core protein VP3 OS=Epizootic hemorrhagic
disease virus 1 GN=S3 PE=3 SV=1
Length = 899

Score = 30.8 bits (68), Expect = 4.6
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2

Query: 446 GGLLRKLFRVFVLTERKKCSFQALPFQFGLSQSGGIEYVVV--SMNTTMLYITWS 288
GG+LR + F + + QALPF + ++ GG+ Y + + +TT+ Y+ ++
Sbjct: 773 GGVLRTVRIKFFDSRPPEEILQALPFDYQTNEKGGLTYATIKYANDTTIYYLIYN 827


>sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1,
chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2
SV=2
Length = 550

Score = 30.4 bits (67), Expect = 6.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3

Query: 286 NLTPFIHEVGGAFKLLVDSKVNLAI 212
NLTP + E+GG LVDS VNL +
Sbjct: 274 NLTPVVLELGGKCPALVDSDVNLQV 298


tr_hit_id Q2R4I6
Definition tr|Q2R4I6|Q2R4I6_ORYSJ CDK-activating kinase assembly factor MAT1 family protein, expressed OS=Oryza sativa subsp. japonica
Align length 26
Score (bit) 42.4
E-value 0.017
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921052|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_A03.
(555 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2R4I6|Q2R4I6_ORYSJ CDK-activating kinase assembly factor MAT... 42 0.017
tr|B8BKF6|B8BKF6_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.017
tr|A3CB64|A3CB64_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.017
tr|B6TUE1|B6TUE1_MAIZE CDK-activating kinase assembly factor MAT... 42 0.022
tr|B6TP49|B6TP49_MAIZE CDK-activating kinase assembly factor MAT... 42 0.022
tr|A7PFL3|A7PFL3_VITVI Chromosome chr11 scaffold_14, whole genom... 39 0.19
tr|Q5SNL8|Q5SNL8_ORYSJ Os06g0171700 protein OS=Oryza sativa subs... 39 0.25
tr|B8B3E6|B8B3E6_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.25
tr|A9RCA4|A9RCA4_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.72
tr|Q8LES8|Q8LES8_ARATH Putative uncharacterized protein OS=Arabi... 34 6.1
tr|Q84K40|Q84K40_ARATH Putative uncharacterized protein At4g3082... 34 6.1

>tr|Q2R4I6|Q2R4I6_ORYSJ CDK-activating kinase assembly factor MAT1
family protein, expressed OS=Oryza sativa subsp.
japonica GN=Os11g0473100 PE=2 SV=1
Length = 195

Score = 42.4 bits (98), Expect = 0.017
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
GARAGGWT E+ +RRA EEAFSS+ +
Sbjct: 170 GARAGGWTIEMGKRRALEEAFSSIFI 195


>tr|B8BKF6|B8BKF6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_36068 PE=4 SV=1
Length = 195

Score = 42.4 bits (98), Expect = 0.017
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
GARAGGWT E+ +RRA EEAFSS+ +
Sbjct: 170 GARAGGWTIEMGKRRALEEAFSSIFI 195


>tr|A3CB64|A3CB64_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032536 PE=4 SV=1
Length = 170

Score = 42.4 bits (98), Expect = 0.017
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
GARAGGWT E+ +RRA EEAFSS+ +
Sbjct: 145 GARAGGWTIEMGKRRALEEAFSSIFI 170


>tr|B6TUE1|B6TUE1_MAIZE CDK-activating kinase assembly factor MAT1
family protein OS=Zea mays PE=2 SV=1
Length = 194

Score = 42.0 bits (97), Expect = 0.022
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -1

Query: 483 ARAGGWTPELSRRRAFEEAFSSLCV 409
ARAGGWT ELS+RRA EEAFS++ +
Sbjct: 170 ARAGGWTAELSKRRALEEAFSAIFI 194


>tr|B6TP49|B6TP49_MAIZE CDK-activating kinase assembly factor MAT1
family protein OS=Zea mays PE=2 SV=1
Length = 194

Score = 42.0 bits (97), Expect = 0.022
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = -1

Query: 483 ARAGGWTPELSRRRAFEEAFSSLCV 409
ARAGGWT ELS+RRA EEAFS++ +
Sbjct: 170 ARAGGWTAELSKRRALEEAFSAIFI 194


>tr|A7PFL3|A7PFL3_VITVI Chromosome chr11 scaffold_14, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017144001
PE=4 SV=1
Length = 189

Score = 38.9 bits (89), Expect = 0.19
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
G +AGGW+ ELS+RRA EEAF S+ +
Sbjct: 164 GGKAGGWSIELSKRRAIEEAFGSIWI 189


>tr|Q5SNL8|Q5SNL8_ORYSJ Os06g0171700 protein OS=Oryza sativa subsp.
japonica GN=P0675A05.28 PE=2 SV=1
Length = 195

Score = 38.5 bits (88), Expect = 0.25
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
GARAGGW+ E+ +RRA +EAFS++ V
Sbjct: 170 GARAGGWSIEMCKRRALQEAFSTIFV 195


>tr|B8B3E6|B8B3E6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21849 PE=4 SV=1
Length = 195

Score = 38.5 bits (88), Expect = 0.25
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
GARAGGW+ E+ +RRA +EAFS++ V
Sbjct: 170 GARAGGWSIEMCKRRALQEAFSTIFV 195


>tr|A9RCA4|A9RCA4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_64452 PE=4 SV=1
Length = 257

Score = 37.0 bits (84), Expect = 0.72
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCVN 406
G RAGGWT +++RRR +EEA S+ V+
Sbjct: 231 GLRAGGWTIDITRRRCYEEAIMSIWVS 257


>tr|Q8LES8|Q8LES8_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 178

Score = 33.9 bits (76), Expect = 6.1
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -1

Query: 480 RAGGWTPELSRRRAFEEAFSSLCV 409
RAGG++ E+S+RRA EEAF+S+ V
Sbjct: 155 RAGGFSLEISKRRALEEAFASIWV 178