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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921052
Clone id YMU001_000145_A03
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAATCAAGCATTAGCAATGGGCATCCAATTGGATTTTCGAAACTCTTCTCATGCTGTTCT
GCAATGATTACTCGAAAGTTTGTATGACCAATTCTGGTTGGGCTCATTTCCACCAAGGTT
AGCCAAGCTAAAAAGGACTAATGTCATCCATCCAATATATCTTCGTAGCGACTCTCAACG
ACAAGCTGTTGTTCTACTTCAGCTGCTTCTTTATGGCTAAGTTGACTTTACTATCTACCA
GCAGTTTGAAAGCTCCACCCACCTCATGGATGAACGGCGTCAAATTCAGACCAAGTTATA
TACAACATGGTAGTATTCATGCTTACTACAACATATTCAATGCCACCTGACTGAGACAAA
CCAAACTGAAACGGCAAGGCCTGAAAGCTACATTTCTTCCTTTCAGTTAACACAAAGACT
CGAAAAAGCTTCCTCAAAAGCCCTCCGACGACTCAATTCAGGGGTCCATCCTCCTGCTCT
TGCACCTTTTTCTTTTCACAACTTCTTTGTTTCCTCATCCTCGACCAGCCCTTCACGGTC
ATGACTACTCGAAGC
■■Homology search results ■■ -
sp_hit_id P33474
Definition sp|P33474|VP3_EHDVA Core protein VP3 OS=Epizootic hemorrhagic disease virus 2 (strain Australia)
Align length 55
Score (bit) 32.0
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921052|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_A03.
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33474|VP3_EHDVA Core protein VP3 OS=Epizootic hemorrhagic di...    32   2.1  
sp|P20608|VP3_BTV1A Core protein VP3 OS=Bluetongue virus 1 (isol...    31   3.5  
sp|P27281|VP3_EHDV1 Core protein VP3 OS=Epizootic hemorrhagic di...    31   4.6  
sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1,...    30   6.0  

>sp|P33474|VP3_EHDVA Core protein VP3 OS=Epizootic hemorrhagic
           disease virus 2 (strain Australia) GN=S3 PE=3 SV=1
          Length = 899

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 446 GGLLRKLFRVFVLTERKKCSFQALPFQFGLSQSGGIEYVVV--SMNTTMLYITWS 288
           GG+LR +   F  +   +   QALPF +  S+ GG+ Y  +  + +TT+ Y+ ++
Sbjct: 773 GGVLRTVRVKFFDSRPPEEILQALPFDYQTSEKGGLTYATIKYANDTTIYYLIYN 827


>sp|P20608|VP3_BTV1A Core protein VP3 OS=Bluetongue virus 1 (isolate
           Australia) GN=S3 PE=3 SV=1
          Length = 901

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 446 GGLLRKLFRVFVLTERKKCSFQALPFQFGLSQSGGIEYVVV--SMNTTMLYITWS 288
           GG+LR +   FV         Q LPF +  ++ GG+ Y  +  +  TT+ Y+ ++
Sbjct: 775 GGVLRTVRVKFVDARPPDDVLQGLPFSYDTNEKGGLAYATIKYATETTIFYLIYN 829


>sp|P27281|VP3_EHDV1 Core protein VP3 OS=Epizootic hemorrhagic
           disease virus 1 GN=S3 PE=3 SV=1
          Length = 899

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -2

Query: 446 GGLLRKLFRVFVLTERKKCSFQALPFQFGLSQSGGIEYVVV--SMNTTMLYITWS 288
           GG+LR +   F  +   +   QALPF +  ++ GG+ Y  +  + +TT+ Y+ ++
Sbjct: 773 GGVLRTVRIKFFDSRPPEEILQALPFDYQTNEKGGLTYATIKYANDTTIYYLIYN 827


>sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1,
           chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2
           SV=2
          Length = 550

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -3

Query: 286 NLTPFIHEVGGAFKLLVDSKVNLAI 212
           NLTP + E+GG    LVDS VNL +
Sbjct: 274 NLTPVVLELGGKCPALVDSDVNLQV 298
tr_hit_id Q2R4I6
Definition tr|Q2R4I6|Q2R4I6_ORYSJ CDK-activating kinase assembly factor MAT1 family protein, expressed OS=Oryza sativa subsp. japonica
Align length 26
Score (bit) 42.4
E-value 0.017
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921052|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_A03.
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2R4I6|Q2R4I6_ORYSJ CDK-activating kinase assembly factor MAT...    42   0.017
tr|B8BKF6|B8BKF6_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.017
tr|A3CB64|A3CB64_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.017
tr|B6TUE1|B6TUE1_MAIZE CDK-activating kinase assembly factor MAT...    42   0.022
tr|B6TP49|B6TP49_MAIZE CDK-activating kinase assembly factor MAT...    42   0.022
tr|A7PFL3|A7PFL3_VITVI Chromosome chr11 scaffold_14, whole genom...    39   0.19 
tr|Q5SNL8|Q5SNL8_ORYSJ Os06g0171700 protein OS=Oryza sativa subs...    39   0.25 
tr|B8B3E6|B8B3E6_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.25 
tr|A9RCA4|A9RCA4_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.72 
tr|Q8LES8|Q8LES8_ARATH Putative uncharacterized protein OS=Arabi...    34   6.1  
tr|Q84K40|Q84K40_ARATH Putative uncharacterized protein At4g3082...    34   6.1  

>tr|Q2R4I6|Q2R4I6_ORYSJ CDK-activating kinase assembly factor MAT1
           family protein, expressed OS=Oryza sativa subsp.
           japonica GN=Os11g0473100 PE=2 SV=1
          Length = 195

 Score = 42.4 bits (98), Expect = 0.017
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
           GARAGGWT E+ +RRA EEAFSS+ +
Sbjct: 170 GARAGGWTIEMGKRRALEEAFSSIFI 195


>tr|B8BKF6|B8BKF6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_36068 PE=4 SV=1
          Length = 195

 Score = 42.4 bits (98), Expect = 0.017
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
           GARAGGWT E+ +RRA EEAFSS+ +
Sbjct: 170 GARAGGWTIEMGKRRALEEAFSSIFI 195


>tr|A3CB64|A3CB64_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_032536 PE=4 SV=1
          Length = 170

 Score = 42.4 bits (98), Expect = 0.017
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
           GARAGGWT E+ +RRA EEAFSS+ +
Sbjct: 145 GARAGGWTIEMGKRRALEEAFSSIFI 170


>tr|B6TUE1|B6TUE1_MAIZE CDK-activating kinase assembly factor MAT1
           family protein OS=Zea mays PE=2 SV=1
          Length = 194

 Score = 42.0 bits (97), Expect = 0.022
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = -1

Query: 483 ARAGGWTPELSRRRAFEEAFSSLCV 409
           ARAGGWT ELS+RRA EEAFS++ +
Sbjct: 170 ARAGGWTAELSKRRALEEAFSAIFI 194


>tr|B6TP49|B6TP49_MAIZE CDK-activating kinase assembly factor MAT1
           family protein OS=Zea mays PE=2 SV=1
          Length = 194

 Score = 42.0 bits (97), Expect = 0.022
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = -1

Query: 483 ARAGGWTPELSRRRAFEEAFSSLCV 409
           ARAGGWT ELS+RRA EEAFS++ +
Sbjct: 170 ARAGGWTAELSKRRALEEAFSAIFI 194


>tr|A7PFL3|A7PFL3_VITVI Chromosome chr11 scaffold_14, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017144001
           PE=4 SV=1
          Length = 189

 Score = 38.9 bits (89), Expect = 0.19
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
           G +AGGW+ ELS+RRA EEAF S+ +
Sbjct: 164 GGKAGGWSIELSKRRAIEEAFGSIWI 189


>tr|Q5SNL8|Q5SNL8_ORYSJ Os06g0171700 protein OS=Oryza sativa subsp.
           japonica GN=P0675A05.28 PE=2 SV=1
          Length = 195

 Score = 38.5 bits (88), Expect = 0.25
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
           GARAGGW+ E+ +RRA +EAFS++ V
Sbjct: 170 GARAGGWSIEMCKRRALQEAFSTIFV 195


>tr|B8B3E6|B8B3E6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21849 PE=4 SV=1
          Length = 195

 Score = 38.5 bits (88), Expect = 0.25
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCV 409
           GARAGGW+ E+ +RRA +EAFS++ V
Sbjct: 170 GARAGGWSIEMCKRRALQEAFSTIFV 195


>tr|A9RCA4|A9RCA4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64452 PE=4 SV=1
          Length = 257

 Score = 37.0 bits (84), Expect = 0.72
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1

Query: 486 GARAGGWTPELSRRRAFEEAFSSLCVN 406
           G RAGGWT +++RRR +EEA  S+ V+
Sbjct: 231 GLRAGGWTIDITRRRCYEEAIMSIWVS 257


>tr|Q8LES8|Q8LES8_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 178

 Score = 33.9 bits (76), Expect = 6.1
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = -1

Query: 480 RAGGWTPELSRRRAFEEAFSSLCV 409
           RAGG++ E+S+RRA EEAF+S+ V
Sbjct: 155 RAGGFSLEISKRRALEEAFASIWV 178