BP921061 |
Clone id |
YMU001_000145_B03 |
Library |
YMU01 |
Length |
530 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000145_B03. |
Accession |
BP921061 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1241Contig1 |
Sequence |
CCTCTTTGCATCACCATGATCATCCTCATCAGGATCTGTGGCTCTCCTCTTCTTTCCTTT AGCATCCCTCTCTCTAATTTTCATTGTTGCCAATCGCTGAGCCTCAGCAACACGTTCGGC AAGCAACATCATTTCATCTTCAAGTGCTGGAAAAGATGGCAGCTTTTTCTCAATAAGCTC TTCAATTCTTTGATAAAGTTCGATATCGTATTGGGTGACAATTGAGATAGCCCGCCCAGA CCTACCCGCACGTGCAGTACGCCCTACCCTATGAATATAGTCTTTGGAATTCATCGAAAT GTCGTAGTTGATTACAACATCCACTGATGGAATGTCTAGCCCCCTACTCGCAACATCTGT GCAGATCAGTATACTCCTTTCTCCAGCTTTAAACTTATTCAATGCACCCAACCTCTTTGG CTGGCTCATTTGACCATTAATTGGTATGGCATCAAGCCCTAGGTTCCGAAGAATCATGGC TACCTTCCTTGTGCACTCACAAGTCCGTGTAAAAACCATAGACGTGCTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GY84 |
Definition |
sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana |
Align length |
170 |
Score (bit) |
202.0 |
E-value |
1.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RTN8 |
Definition |
tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
173 |
Score (bit) |
216.0 |
E-value |
4.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921061|Adiantum capillus-veneris mRNA, clone: YMU001_000145_B03. (530 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella paten... 216 4e-55 tr|Q2PEX8|Q2PEX8_TRIPR Putative replication protein A1 OS=Trifol... 209 5e-53 tr|A8IJV1|A8IJV1_CHLRE Predicted protein OS=Chlamydomonas reinha... 208 1e-52 tr|A7QBY9|A7QBY9_VITVI Chromosome chr1 scaffold_75, whole genome... 208 1e-52 tr|A7R2P2|A7R2P2_VITVI Chromosome undetermined scaffold_438, who... 207 2e-52 tr|A4S5D5|A4S5D5_OSTLU Predicted protein OS=Ostreococcus lucimar... 199 6e-50 tr|Q5ZLB0|Q5ZLB0_CHICK Putative uncharacterized protein OS=Gallu... 196 5e-49 tr|Q9H4E3|Q9H4E3_HUMAN DEAD box protein OS=Homo sapiens GN=E4-DB... 195 1e-48 tr|Q7Z4B1|Q7Z4B1_HUMAN MSTP162 OS=Homo sapiens GN=MST162 PE=2 SV=1 195 1e-48 tr|Q53GJ1|Q53GJ1_HUMAN DEAD (Asp-Glu-Ala-Asp) box polypeptide 47... 195 1e-48 tr|B3KXP4|B3KXP4_HUMAN cDNA FLJ45812 fis, clone NT2RP7016508, hi... 195 1e-48 tr|Q5BIZ6|Q5BIZ6_RAT DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 O... 195 1e-48 tr|A7SRU4|A7SRU4_NEMVE Predicted protein OS=Nematostella vectens... 195 1e-48 tr|Q6INR0|Q6INR0_XENLA MGC81303 protein OS=Xenopus laevis GN=ddx... 193 5e-48 tr|Q922S6|Q922S6_MOUSE Ddx47 protein OS=Mus musculus GN=Ddx47 PE... 192 7e-48 tr|Q4VBG1|Q4VBG1_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 47... 192 7e-48 tr|Q3TEK1|Q3TEK1_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48 tr|A8PGU8|A8PGU8_BRUMA ATP-dependent RNA helicase T26G10.1 in ch... 188 1e-46 tr|Q502B4|Q502B4_DANRE Zgc:112350 OS=Danio rerio GN=zgc:112350 P... 187 2e-46 tr|B3RQA4|B3RQA4_TRIAD Putative uncharacterized protein (Fragmen... 187 4e-46 tr|B6LBZ1|B6LBZ1_BRAFL Putative uncharacterized protein OS=Branc... 186 6e-46 tr|B6KZV0|B6KZV0_BRAFL Putative uncharacterized protein OS=Branc... 184 2e-45 tr|Q16HQ7|Q16HQ7_AEDAE DEAD box ATP-dependent RNA helicase OS=Ae... 181 3e-44 tr|B4MDP0|B4MDP0_DROVI GJ16136 OS=Drosophila virilis GN=GJ16136 ... 181 3e-44 tr|B4JQB9|B4JQB9_DROGR GH13670 OS=Drosophila grimshawi GN=GH1367... 179 6e-44 tr|Q29NS3|Q29NS3_DROPS GA21647 OS=Drosophila pseudoobscura pseud... 179 8e-44 tr|B4GJI5|B4GJI5_DROPE GL25891 OS=Drosophila persimilis GN=GL258... 179 8e-44 tr|B3MN83|B3MN83_DROAN GF14739 OS=Drosophila ananassae GN=GF1473... 179 1e-43 tr|B4N7D0|B4N7D0_DROWI GK21047 OS=Drosophila willistoni GN=GK210... 178 2e-43 tr|B4KGP2|B4KGP2_DROMO GI21075 OS=Drosophila mojavensis GN=GI210... 178 2e-43
>tr|A9RTN8|A9RTN8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_178010 PE=3 SV=1 Length = 452
Score = 216 bits (551), Expect = 4e-55 Identities = 113/173 (65%), Positives = 137/173 (79%), Gaps = 2/173 (1%) Frame = -3
Query: 528 STSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVA 349 +T+MVFTRTCE TRK++++LRNLG AIPI+GQMSQPKRLGAL KFKAG+ +ILICTDVA Sbjct: 259 NTAMVFTRTCEATRKLSLVLRNLGFVAIPISGQMSQPKRLGALAKFKAGDCNILICTDVA 318
Query: 348 SRGLDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIE 169 SRGLDIPSV++VINYDI NSKDYIH AIS+V QYD+ELYQ+IEELI Sbjct: 319 SRGLDIPSVNLVINYDIPTNSKDYIHRVGRTARAGRSGRAISMVCQYDVELYQKIEELIG 378
Query: 168 KKLPSFPALEDEMMLLAERVAEAQRLATMKIRERDA--KGKKRRATDPDEDDH 16 KKLP F ++E++L+ ERV+EAQRLATM +RE+D KGK+R D D DD+ Sbjct: 379 KKLPEFSHQQEEVLLMLERVSEAQRLATMHMREKDGAKKGKRRGHGDDDGDDN 431
>tr|Q2PEX8|Q2PEX8_TRIPR Putative replication protein A1 OS=Trifolium pratense PE=2 SV=1 Length = 440
Score = 209 bits (533), Expect = 5e-53 Identities = 108/173 (62%), Positives = 133/173 (76%) Frame = -3
Query: 528 STSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVA 349 STSMVFTRTC+ TR +A+ILRNLGL AIPING MSQPKRLGALNKFK+G+ +IL+CTDVA Sbjct: 251 STSMVFTRTCDATRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCTDVA 310
Query: 348 SRGLDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIE 169 SRGLDIP+VD+VINYDI NSKDYIH AIS+V QY++E Y +IE+LI Sbjct: 311 SRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIG 370
Query: 168 KKLPSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDDHGD 10 KKLP +PA E+E++LL ERV+EA+RLA K++E K K+R D +D+ D Sbjct: 371 KKLPEYPAQEEEVLLLEERVSEAKRLAATKMKESGGKKKRRGEGDSGDDEDID 423
>tr|A8IJV1|A8IJV1_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_223 PE=3 SV=1 Length = 446
Score = 208 bits (530), Expect = 1e-52 Identities = 102/176 (57%), Positives = 133/176 (75%) Frame = -3
Query: 528 STSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVA 349 ST M+FTRTCE TR++A++LRNLG A+PI+G MSQPKRLGALNKFK+GER+IL+ TDVA Sbjct: 257 STFMIFTRTCESTRRIALLLRNLGFGAVPIHGHMSQPKRLGALNKFKSGERNILVATDVA 316
Query: 348 SRGLDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIE 169 SRGLDIPSVDVVIN+D+ NSKDY+H +++IVTQYD+EL+Q+IE L Sbjct: 317 SRGLDIPSVDVVINFDVPQNSKDYVHRVGRTARAGRSGRSVTIVTQYDVELFQKIEHLTG 376
Query: 168 KKLPSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDDHGDAKR 1 K+ F A +E++LL ERV++AQRLATM+++E DA K +R D D++ G R Sbjct: 377 VKMEQFQAEREEVLLLLERVSDAQRLATMQMKEADAGKKGKRKADDDDEGAGGGGR 432
>tr|A7QBY9|A7QBY9_VITVI Chromosome chr1 scaffold_75, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035163001 PE=3 SV=1 Length = 298
Score = 208 bits (530), Expect = 1e-52 Identities = 110/170 (64%), Positives = 132/170 (77%) Frame = -3
Query: 528 STSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVA 349 ST+MVFTRTC+ TR +A++LRNLGL AIPI+G MSQ KRLGALNKFKAGE +ILICTDVA Sbjct: 111 STTMVFTRTCDATRLLALLLRNLGLGAIPISGHMSQTKRLGALNKFKAGECNILICTDVA 170
Query: 348 SRGLDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIE 169 SRGLDIPSVD+VINYDI NSKDYIH AIS+V QY++E Y +IE+LI Sbjct: 171 SRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYELEWYIQIEKLIG 230
Query: 168 KKLPSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 19 KKLP FPA E+E++LL ERV EA+R++ MKI+E K KKRR D E++ Sbjct: 231 KKLPEFPAQEEEVLLLLERVTEAKRISQMKIKETGGK-KKRRGGDEGEEE 279
>tr|A7R2P2|A7R2P2_VITVI Chromosome undetermined scaffold_438, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013119001 PE=3 SV=1 Length = 436
Score = 207 bits (528), Expect = 2e-52 Identities = 109/170 (64%), Positives = 132/170 (77%) Frame = -3
Query: 528 STSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVA 349 ST+MVFTRTC+ TR +A++LRNLGL AIPI+G MSQ KRLGALNKFKAGE +ILICTDVA Sbjct: 249 STTMVFTRTCDATRLLALLLRNLGLRAIPISGHMSQAKRLGALNKFKAGECNILICTDVA 308
Query: 348 SRGLDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIE 169 SRGLDIPSVD+VINYDI NSKDYIH AIS+V QY++E Y +IE+LI Sbjct: 309 SRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIG 368
Query: 168 KKLPSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 19 KKLP FPA E+E++LL ERV EA+R++ MK++E K KKRR D E++ Sbjct: 369 KKLPEFPAQEEEVLLLLERVTEAKRISQMKVKETGGK-KKRRGGDEGEEE 417
>tr|A4S5D5|A4S5D5_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_26724 PE=3 SV=1 Length = 466
Score = 199 bits (507), Expect = 6e-50 Identities = 103/173 (59%), Positives = 127/173 (73%), Gaps = 3/173 (1%) Frame = -3
Query: 528 STSMVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVA 349 ST +VF RTC+ TRK+A+I RNLG A+PI+GQMSQPKR+ AL KFK+GER+ILI TDVA Sbjct: 258 STLIVFARTCDATRKLALIARNLGFGAVPIHGQMSQPKRIAALQKFKSGERNILIATDVA 317
Query: 348 SRGLDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIE 169 SRGLDIPSVDVVINYD+ NSKDY+H A+++VTQYD+ELYQ+IE LI Sbjct: 318 SRGLDIPSVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAVTMVTQYDVELYQKIERLIN 377
Query: 168 KKLPSFPALEDEMMLLAERVAEAQRLATMKIR---ERDAKGKKRRATDPDEDD 19 KKL +P E+ +MLL +RV EAQR+A ++R ER KG KR D D+ D Sbjct: 378 KKLDKYPLEEEAVMLLYDRVNEAQRIAIQQMRDQDERKGKGAKRGFKDDDDAD 430
>tr|Q5ZLB0|Q5ZLB0_CHICK Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_6o10 PE=2 SV=1 Length = 453
Score = 196 bits (499), Expect = 5e-49 Identities = 101/171 (59%), Positives = 129/171 (75%) Frame = -3
Query: 519 MVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRG 340 M+F TC T++ A++LRNLG AIP++GQMSQ KRLG+LNKFKA RSIL+ TDVASRG Sbjct: 268 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLATDVASRG 327
Query: 339 LDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIEKKL 160 LDIP VDVVIN+DI +SKDYIH +I+ VTQYD+EL+QRIE LI KKL Sbjct: 328 LDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEHLIGKKL 387
Query: 159 PSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDDHGDA 7 P+FP E+E+M+L ERVAEAQR A M++RE +G+K+R+ + D+DD +A Sbjct: 388 PAFPMQEEEVMMLTERVAEAQRFARMELRE---QGEKKRSRNADDDDTEEA 435
>tr|Q9H4E3|Q9H4E3_HUMAN DEAD box protein OS=Homo sapiens GN=E4-DBP PE=2 SV=1 Length = 455
Score = 195 bits (496), Expect = 1e-48 Identities = 100/167 (59%), Positives = 121/167 (72%) Frame = -3
Query: 519 MVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRG 340 M+F TC T++ A++LRNLG AIP++GQMSQ KRLG+LNKFKA E SIL+ TDVASRG Sbjct: 267 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKESSILLATDVASRG 326
Query: 339 LDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIEKKL 160 LDIP VDVV+N+DI +SKDYIH AI+ VTQYD+EL+QRIE LI KKL Sbjct: 327 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 386
Query: 159 PSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 19 P FP +DE+M+L ERVAEAQR A M++RE K K+ R D DD Sbjct: 387 PGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGDNDD 433
>tr|Q7Z4B1|Q7Z4B1_HUMAN MSTP162 OS=Homo sapiens GN=MST162 PE=2 SV=1 Length = 189
Score = 195 bits (496), Expect = 1e-48 Identities = 100/167 (59%), Positives = 121/167 (72%) Frame = -3
Query: 519 MVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRG 340 M+F TC T++ A++LRNLG AIP++GQMSQ KRLG+LNKFKA RSIL+ TDVASRG Sbjct: 1 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 60
Query: 339 LDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIEKKL 160 LDIP VDVV+N+DI +SKDYIH AI+ VTQYD+EL+QRIE LI KKL Sbjct: 61 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 120
Query: 159 PSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 19 P FP +DE+M+L ERVAEAQR A M++RE K K+ R D DD Sbjct: 121 PGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGDNDD 167
>tr|Q53GJ1|Q53GJ1_HUMAN DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 448
Score = 195 bits (496), Expect = 1e-48 Identities = 100/167 (59%), Positives = 121/167 (72%) Frame = -3
Query: 519 MVFTRTCECTRKVAMILRNLGLDAIPINGQMSQPKRLGALNKFKAGERSILICTDVASRG 340 M+F TC T++ A++LRNLG AIP++GQMSQ KRLG+LNKFKA RSIL+ TDVASRG Sbjct: 260 MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRG 319
Query: 339 LDIPSVDVVINYDISMNSKDYIHXXXXXXXXXXXXXAISIVTQYDIELYQRIEELIEKKL 160 LDIP VDVV+N+DI +SKDYIH AI+ VTQYD+EL+QRIE LI KKL Sbjct: 320 LDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKL 379
Query: 159 PSFPALEDEMMLLAERVAEAQRLATMKIRERDAKGKKRRATDPDEDD 19 P FP +DE+M+L ERVAEAQR A M++RE K K+ R D DD Sbjct: 380 PGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGDNDD 426
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