BP921064 |
Clone id |
YMU001_000145_B08 |
Library |
YMU01 |
Length |
424 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000145_B08. |
Accession |
BP921064 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2010Contig1 |
Sequence |
TTTGGAGCCTGCAGCATGCGTGTCCTTCCTCTCCTTCATCTCCGCATCACTATCCTCATC ATCTGAGGCTTGCACATCTACATCCATGGCTTCCTGTATGTCAGCAGAAGGTCCGTCGCC ATACTTTGCTATAGCAGCACCCTTCTGATGTTGAAGCTTCGCAAGGAGAGACTTTTCTCG GACAGGTATGGCCTCTTCACGTTTGTCGAGCTCCTCAAAGGCCTTCATGTTCTTCTCTTC GAAAGCCTTCTCCTTGGCCAGTAGCTCCTCGTGCTTGAGGGCGACGGACTTGTCAACCTC TGCAATGAAGGCATCAAGATCATTCCACTCTGAAGTGAAAGCTGCGAGCAAGTTCTGAAA ACTCTCGAGCTCTGCAAAGGTCTTCTCGGTGCGCTCCTTGGCCGAAAGAGCGGGTGCCAT GGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P09405 |
Definition |
sp|P09405|NUCL_MOUSE Nucleolin OS=Mus musculus |
Align length |
75 |
Score (bit) |
35.0 |
E-value |
0.12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84NF6 |
Definition |
tr|Q84NF6|Q84NF6_9CONI ABI3-interacting protein 2 OS=Callitropsis nootkatensis |
Align length |
130 |
Score (bit) |
53.5 |
E-value |
5.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921064|Adiantum capillus-veneris mRNA, clone: YMU001_000145_B08. (424 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q84NF6|Q84NF6_9CONI ABI3-interacting protein 2 OS=Callitropsi... 54 5e-06 tr|B8LQD8|B8LQD8_PICSI Putative uncharacterized protein OS=Picea... 54 5e-06 tr|A9NX48|A9NX48_PICSI Putative uncharacterized protein OS=Picea... 47 5e-04 tr|A7PER4|A7PER4_VITVI Chromosome chr11 scaffold_13, whole genom... 45 0.001 tr|A5BDD5|A5BDD5_VITVI Putative uncharacterized protein OS=Vitis... 45 0.001 tr|A9PER9|A9PER9_POPTR Putative uncharacterized protein OS=Popul... 41 0.033 tr|A9RFG5|A9RFG5_PHYPA Predicted protein (Fragment) OS=Physcomit... 40 0.057 tr|Q7PTC8|Q7PTC8_ANOGA AGAP007644-PA OS=Anopheles gambiae GN=AGA... 40 0.075 tr|A7Y5Q5|A7Y5Q5_PINPS Hydroxyproline-rich glycoprotein-like pro... 37 0.63 tr|A7Y5L5|A7Y5L5_PINSY Hydroxyproline-rich glycoprotein-like pro... 37 0.63 tr|Q8CD23|Q8CD23_MOUSE Putative uncharacterized protein OS=Mus m... 35 1.4 tr|A9NVZ1|A9NVZ1_PICSI Putative uncharacterized protein OS=Picea... 35 1.4 tr|A7Y5M0|A7Y5M0_PINSY Hydroxyproline-rich glycoprotein-like pro... 35 1.4 tr|B6M2S4|B6M2S4_BRAFL Putative uncharacterized protein OS=Branc... 35 1.4 tr|Q9CT46|Q9CT46_MOUSE Putative uncharacterized protein (Fragmen... 35 1.8 tr|Q8CE30|Q8CE30_MOUSE Putative uncharacterized protein OS=Mus m... 35 1.8 tr|Q3TT41|Q3TT41_MOUSE Putative uncharacterized protein OS=Mus m... 35 1.8 tr|Q3TL52|Q3TL52_MOUSE Putative uncharacterized protein OS=Mus m... 35 1.8 tr|Q3TGR3|Q3TGR3_MOUSE Putative uncharacterized protein OS=Mus m... 35 1.8 tr|Q01CT2|Q01CT2_OSTTA Putative transducin / WD-40 repeat protei... 35 1.8 tr|A5BUN6|A5BUN6_VITVI Putative uncharacterized protein OS=Vitis... 35 1.8 tr|B8LQQ6|B8LQQ6_PICSI Putative uncharacterized protein OS=Picea... 35 2.4 tr|A9NWA8|A9NWA8_PICSI Putative uncharacterized protein OS=Picea... 35 2.4 tr|B5H5C6|B5H5C6_STRPR Integral membrane protein OS=Streptomyces... 34 3.1 tr|A9NV86|A9NV86_PICSI Putative uncharacterized protein OS=Picea... 34 3.1 tr|B6HEI6|B6HEI6_PENCH Pc20g07540 protein OS=Penicillium chrysog... 34 3.1 tr|B6KR78|B6KR78_TOXGO Putative uncharacterized protein OS=Toxop... 34 4.1 tr|B6KQ74|B6KQ74_TOXGO Putative uncharacterized protein OS=Toxop... 33 5.3 tr|B8LP41|B8LP41_PICSI Putative uncharacterized protein OS=Picea... 33 7.0 tr|A9NUS9|A9NUS9_PICSI Putative uncharacterized protein OS=Picea... 33 7.0
>tr|Q84NF6|Q84NF6_9CONI ABI3-interacting protein 2 OS=Callitropsis nootkatensis GN=AIP2 PE=2 SV=2 Length = 672
Score = 53.5 bits (127), Expect = 5e-06 Identities = 31/130 (23%), Positives = 64/130 (49%) Frame = -2
Query: 423 AMAPALSAKERTEKTFAELESFQNLLAAFTSEWNDLDAFIAEVDKSVXXXXXXXXXXXXX 244 AM KE +K+F EL++ + ++ T +W +LD + +D+++ Sbjct: 32 AMESTTLKKELLQKSFEELDAHKGVMENCTIQWKELDEHFSYIDEALKKRFEELLEKEKQ 91
Query: 243 XXXKNMKAFEELDKREEAIPVREKSLLAKLQHQKGAAIAKYGDGPSADIQEAMDVDVQAS 64 K + ++ L+K +E + +E++ L+++Q +K AA+A + + +EA + +S Sbjct: 92 FEAKTSETWKVLEKHDEVVAAKEQASLSRVQEEKDAAVATIQEACAKKQKEA---PIDSS 148
Query: 63 DDEDSDAEMK 34 D D E K Sbjct: 149 SKSDGDGENK 158
>tr|B8LQD8|B8LQD8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 601
Score = 53.5 bits (127), Expect = 5e-06 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 3/137 (2%) Frame = -2
Query: 405 SAKERTEKTFAELESFQNLLAAFTSEWNDLDAFIAEVDKSVXXXXXXXXXXXXXXXXKNM 226 S KER +K F +L+ + L T +W +L+ +++S+ K Sbjct: 6 SKKERLQKAFVDLDEHREALTKCTVQWKELEEHFVSLERSIQKRLEDLEAKERTFEAKMR 65
Query: 225 KAFEELDKREEAIPVREKSLLAKLQHQKGAAIAKYGDGPSADIQEAMDVDVQASDDEDSD 46 + + LDKRE +I +E++ LA++Q QK AA+A + ++E D + D+D+ Sbjct: 66 ETQDILDKREVSIASKEQASLARVQEQKDAALALIFE-ERRKLKEEFDNGCEKVTDDDTK 124
Query: 45 AEM---KERKDTHAAGS 4 + KE +A GS Sbjct: 125 KDSIKEKENGSVNANGS 141
>tr|A9NX48|A9NX48_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 534
Score = 47.0 bits (110), Expect = 5e-04 Identities = 28/98 (28%), Positives = 50/98 (51%) Frame = -2
Query: 399 KERTEKTFAELESFQNLLAAFTSEWNDLDAFIAEVDKSVXXXXXXXXXXXXXXXXKNMKA 220 K+R E+ F L++ + +L T +W +L A +++S+ K + Sbjct: 8 KQRLEEAFTVLDTQRAVLEKCTLQWKELTDHYASLEQSLQKKFEELAEKEKSLELKTKET 67
Query: 219 FEELDKREEAIPVREKSLLAKLQHQKGAAIAKYGDGPS 106 E LDKRE++I E++ +A+L+ QK +A+A G S Sbjct: 68 EELLDKREQSIESNEETYIARLEEQKTSALAAIESGKS 105
>tr|A7PER4|A7PER4_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016759001 PE=4 SV=1 Length = 500
Score = 45.4 bits (106), Expect = 0.001 Identities = 24/92 (26%), Positives = 45/92 (48%) Frame = -2
Query: 396 ERTEKTFAELESFQNLLAAFTSEWNDLDAFIAEVDKSVXXXXXXXXXXXXXXXXKNMKAF 217 +R +K F LE+ + +L+ T + L + + S+ + K Sbjct: 6 DRVQKLFDSLEAQKTILSTCTQLYKTLSNHFSSLQHSLSQKSSSLDSKFQALESDSKKTL 65
Query: 216 EELDKREEAIPVREKSLLAKLQHQKGAAIAKY 121 E LD+RE +IP RE S A+++ Q+ AA++++ Sbjct: 66 ESLDQRENSIPERESSAAARIEEQREAALSEF 97
>tr|A5BDD5|A5BDD5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004639 PE=4 SV=1 Length = 630
Score = 45.4 bits (106), Expect = 0.001 Identities = 24/92 (26%), Positives = 45/92 (48%) Frame = -2
Query: 396 ERTEKTFAELESFQNLLAAFTSEWNDLDAFIAEVDKSVXXXXXXXXXXXXXXXXKNMKAF 217 +R +K F LE+ + +L+ T + L + + S+ + K Sbjct: 6 DRVQKLFDSLEAQKTILSTCTQLYKTLSNHFSSLQHSLSQKSSSLDSKFQALESDSKKTL 65
Query: 216 EELDKREEAIPVREKSLLAKLQHQKGAAIAKY 121 E LD+RE +IP RE S A+++ Q+ AA++++ Sbjct: 66 ESLDQRENSIPERESSAAARIEEQREAALSEF 97
>tr|A9PER9|A9PER9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 544
Score = 40.8 bits (94), Expect = 0.033 Identities = 27/97 (27%), Positives = 48/97 (49%) Frame = -2
Query: 420 MAPALSAKERTEKTFAELESFQNLLAAFTSEWNDLDAFIAEVDKSVXXXXXXXXXXXXXX 241 M S ++ +K FAELES + + +W +L+ +++S+ Sbjct: 11 MDSTTSRIQQLQKAFAELESHRAV--TLNLKWKELEEHFHGLERSLKRRFHELEDQEKQY 68
Query: 240 XXKNMKAFEELDKREEAIPVREKSLLAKLQHQKGAAI 130 K +A E L+KRE A+ +E++ L KLQ ++ AA+ Sbjct: 69 ETKTRRAREILEKREAAVMAKEQASLEKLQEKQDAAV 105
>tr|A9RFG5|A9RFG5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_201842 PE=4 SV=1 Length = 436
Score = 40.0 bits (92), Expect = 0.057 Identities = 23/83 (27%), Positives = 42/83 (50%) Frame = -2
Query: 375 AELESFQNLLAAFTSEWNDLDAFIAEVDKSVXXXXXXXXXXXXXXXXKNMKAFEELDKRE 196 A+LE + + T EW + + + E++ + K + + LD RE Sbjct: 2 ADLEIQRAAIVNCTLEWKEFEDYFTELEAVMQKRLEDLVAKEKAFEIKYQEMQKALDNRE 61
Query: 195 EAIPVREKSLLAKLQHQKGAAIA 127 EA+ RE+++L+++Q QK +AIA Sbjct: 62 EAVSSREQAMLSRVQEQKDSAIA 84
>tr|Q7PTC8|Q7PTC8_ANOGA AGAP007644-PA OS=Anopheles gambiae GN=AGAP007644 PE=4 SV=3 Length = 293
Score = 39.7 bits (91), Expect = 0.075 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = -2
Query: 219 FEELDKREEAIPVREKSLLAKLQHQKGAAIAKYG----DGPSADIQEAMDVDVQASDDED 52 FEE+ KRE I +K+ Q K A +AK G D S D +E D D DDED Sbjct: 220 FEEITKRE--IAATKKTSKTAKQPTKPATVAKKGKKTDDAMSEDEEEEEDDDDDDEDDED 277
Query: 51 SDAEMKERKDT 19 D E E+ D+ Sbjct: 278 DDNEAMEQDDS 288
>tr|A7Y5Q5|A7Y5Q5_PINPS Hydroxyproline-rich glycoprotein-like protein (Fragment) OS=Pinus pinaster GN=hprgp PE=4 SV=1 Length = 129
Score = 36.6 bits (83), Expect = 0.63 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%) Frame = -2
Query: 216 EELDKREEAIPVREKSLLAKLQHQKGAAIAKYGDGPSAD----IQEAMDVD 76 E LDKRE++I E++ LA+L+ QK AA+A G S + + E MD + Sbjct: 5 ELLDKREQSIESNEETYLARLEEQKNAALAAIESGKSENSLKFLCEKMDAE 55
>tr|A7Y5L5|A7Y5L5_PINSY Hydroxyproline-rich glycoprotein-like protein (Fragment) OS=Pinus sylvestris GN=hprgp PE=4 SV=1 Length = 129
Score = 36.6 bits (83), Expect = 0.63 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%) Frame = -2
Query: 216 EELDKREEAIPVREKSLLAKLQHQKGAAIAKYGDGPSAD----IQEAMDVD 76 E LDKRE++I E++ LA+L+ QK AA+A G S + + E MD + Sbjct: 5 ELLDKREQSIESNEETYLARLEEQKNAALAAIESGKSENSLKFLCEKMDAE 55
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