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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921070
Clone id YMU001_000145_C03
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCTCCCTTTCACCTTCTGTTTAGCATCCAACTTCCCCTTTTCAACATCATCATCGCTCA
TAATATCCACGTCTTCATCCATGCTTGCTGCACTGCTACTGCTACTAGAATTACTATCAC
TCCCACTTCCACTTCCACTTCCACTGTCAGTGCCACTACCACTACCACTGCTATCAGAAT
CACTATCACTTCCACTGCCACTTCCACTAGAGCTGCTGGACTCACTACCTGCATTACTTG
GATCCTTTGTTGCATGAGCTGCTTCCTGCTTGGTTAAGTCTTCATTGCTGACATTTGAAT
TTCCTTTGTGTTTTGGAGAAGCTTCTTTGATATCATAATGAGAAACAACACTTAACGGCC
TGTCGTACGATGAAGGCTCTTCCTTGTCCTTAGCAGCTTCTTTCTCTACAATACCATTTA
AAGGATCGGCCTCGTGTGTGATAGGCCTCACAGTTTCTTGAGCCCTTCCAGAGCTTGTGG
GT
■■Homology search results ■■ -
sp_hit_id P08551
Definition sp|P08551|NFL_MOUSE Neurofilament light polypeptide OS=Mus musculus
Align length 73
Score (bit) 33.5
E-value 0.52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921070|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_C03.
         (482 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08551|NFL_MOUSE Neurofilament light polypeptide OS=Mus muscu...    33   0.52 
sp|Q9Z6J2|DEF_CHLPN Peptide deformylase OS=Chlamydia pneumoniae ...    30   5.7  
sp|Q6BT58|MCE1_DEBHA mRNA-capping enzyme subunit alpha OS=Debary...    30   7.5  
sp|Q8C5N3|NCM_MOUSE Nucampholin homolog OS=Mus musculus GN=Ncm P...    29   9.8  

>sp|P08551|NFL_MOUSE Neurofilament light polypeptide OS=Mus musculus
           GN=Nefl PE=1 SV=5
          Length = 543

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -2

Query: 481 PTSSGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKG 302
           P S G A+E  +    E +   G  E+EAAKD+ E +  +         D KE+  + K 
Sbjct: 471 PPSEGEAEEEEKE-KEEGEEEEGAEEEEAAKDESEDTKEEEEGGEGEEEDTKESEEEEKK 529

Query: 301 NSNVSNEDLTKQE 263
             +   E + K++
Sbjct: 530 EESAGEEQVAKKK 542


>sp|Q9Z6J2|DEF_CHLPN Peptide deformylase OS=Chlamydia pneumoniae
           GN=def PE=3 SV=1
          Length = 186

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = -2

Query: 454 TVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKGNSNVSNEDL 275
           T R I HE D LNG++  +  ++ ++P  +   L  +          K + N+++S E+L
Sbjct: 135 TARIIMHETDHLNGVLYIDLMEEPKDPKKFKASLEKI----------KRRYNTHLSKEEL 184


>sp|Q6BT58|MCE1_DEBHA mRNA-capping enzyme subunit alpha
           OS=Debaryomyces hansenii GN=CEG1 PE=3 SV=2
          Length = 458

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 400 EAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKGNSNVSNEDLTKQEA 260
           E  +   EP+  D P S  +  D++E  P   G S  ++++ +KQ +
Sbjct: 397 ETGRSHPEPNREDEPASKRTKIDMEEPEPNGFGGSTTNHQNASKQNS 443


>sp|Q8C5N3|NCM_MOUSE Nucampholin homolog OS=Mus musculus GN=Ncm PE=2
           SV=1
          Length = 908

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 385 KEEPSSYDRPLSVVSHYDIKEASPKHKGNSNVSNEDLTKQEAAHATKD 242
           +E  SSY R  S    Y  +E SP+ +G S+ S  D  +    ++  D
Sbjct: 16  RETHSSYRRSSSPEDRYTEQERSPRDRGYSDYSRSDYERSRRGYSYDD 63
tr_hit_id Q6XDM1
Definition tr|Q6XDM1|Q6XDM1_PHYIN Transglutaminase elicitor M81E OS=Phytophthora infestans
Align length 81
Score (bit) 38.9
E-value 0.13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921070|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_C03.
         (482 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6XDM1|Q6XDM1_PHYIN Transglutaminase elicitor M81E OS=Phytoph...    39   0.13 
tr|Q8ERK2|Q8ERK2_OCEIH Putative uncharacterized protein OB1300 O...    35   2.4  
tr|Q7RXD7|Q7RXD7_NEUCR Predicted protein OS=Neurospora crassa GN...    34   4.1  
tr|Q54QS7|Q54QS7_DICDI Putative uncharacterized protein OS=Dicty...    33   5.4  
tr|B4JKQ1|B4JKQ1_DROGR GH12018 OS=Drosophila grimshawi GN=GH1201...    33   5.4  
tr|A4QY44|A4QY44_MAGGR Putative uncharacterized protein OS=Magna...    33   5.4  
tr|Q8ISF7|Q8ISF7_CAEEL 2MDa_1 protein OS=Caenorhabditis elegans ...    33   7.0  
tr|Q8ISF6|Q8ISF6_CAEEL 2MDa_2 protein OS=Caenorhabditis elegans ...    33   7.0  
tr|Q8ISF5|Q8ISF5_CAEEL 1MDa_1 protein OS=Caenorhabditis elegans ...    33   7.0  

>tr|Q6XDM1|Q6XDM1_PHYIN Transglutaminase elicitor M81E
           OS=Phytophthora infestans PE=2 SV=1
          Length = 737

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -2

Query: 481 PTSSGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPL--SVVSHYDIKEASPKH 308
           P+ +G   +T  P T       G   K+ A   EEP++  R L  SVVS +D++E   K 
Sbjct: 149 PSKTGTTTDTTTPSTVNG----GAKPKDCATGWEEPATATRKLRDSVVSGHDLEEKLEKK 204

Query: 307 KGNSNVSNEDLTKQEAAHATK 245
           +     +N+D+ K EA   TK
Sbjct: 205 RRLEAYANKDIAKLEAYFGTK 225


>tr|Q8ERK2|Q8ERK2_OCEIH Putative uncharacterized protein OB1300
           OS=Oceanobacillus iheyensis GN=OB1300 PE=4 SV=1
          Length = 144

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 18/77 (23%), Positives = 33/77 (42%)
 Frame = -2

Query: 472 SGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKGNSN 293
           S +  E ++P+  E D     +EKE    +++  S ++ + V       +  P  +GN N
Sbjct: 48  SDKETEEIKPVNQEKDKEKDKLEKEKLNSEKDNESKEKEIQVEEDTTQDKELPSEEGNEN 107

Query: 292 VSNEDLTKQEAAHATKD 242
              ED T  +     K+
Sbjct: 108 HQEEDETSTDMDEEEKE 124


>tr|Q7RXD7|Q7RXD7_NEUCR Predicted protein OS=Neurospora crassa
            GN=NCU05047 PE=4 SV=1
          Length = 2992

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = -2

Query: 481  PTSSGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKG 302
            P  +GR+Q+  R +TH+ D  +   E+E  +++EE    D     + +  +   SP  + 
Sbjct: 899  PLRAGRSQKAWRSVTHDVDDSD---EEEEEEEEEEEDDTDPDAMDIEYASLSSLSPPQQN 955

Query: 301  NSNVSNEDL 275
            +   SN+ L
Sbjct: 956  SPIRSNQSL 964


>tr|Q54QS7|Q54QS7_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0218517 PE=4 SV=1
          Length = 1497

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
 Frame = -2

Query: 406 EKEAAKDKEEPSSYDRPLSV--VSHYDIKEASPKHKGNSNVSN-----EDLTKQEAAHAT 248
           EKE   DK +  S+D P +    S       +PK K N N  N     ED+T +E +H +
Sbjct: 112 EKELENDKMDTDSHDNPKTTTPTSSTTTTTTTPKSKTNKNKKNEKIEGEDVTDEEDSHKS 171

Query: 247 K 245
           K
Sbjct: 172 K 172


>tr|B4JKQ1|B4JKQ1_DROGR GH12018 OS=Drosophila grimshawi GN=GH12018
           PE=4 SV=1
          Length = 724

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -2

Query: 439 THEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKGNSNVSNEDLTKQEA 260
           T  AD  N  VEK + +  ++    + P +       ++  PK K  ++ SN + T+ EA
Sbjct: 475 TGAADAANAAVEKASVEKDDDEQQAEAPAAEAEAKTEQQLEPKSKAANDESNTEKTETEA 534

Query: 259 AHAT 248
             AT
Sbjct: 535 VEAT 538


>tr|A4QY44|A4QY44_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_13956 PE=4 SV=1
          Length = 1485

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/74 (27%), Positives = 33/74 (44%)
 Frame = -2

Query: 475 SSGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKGNS 296
           +SG   E +   TH     N  + +E++KD EE SS +  +    +   +E +P  + N 
Sbjct: 393 ASGELDEELLGQTHHIRTTNQSLTQESSKDLEEESSEEETIPSSQYNAARENNPNVQDNE 452

Query: 295 NVSNEDLTKQEAAH 254
             +N   T   A H
Sbjct: 453 ETTNARKTPVPAKH 466


>tr|Q8ISF7|Q8ISF7_CAEEL 2MDa_1 protein OS=Caenorhabditis elegans
            GN=isof PE=2 SV=1
          Length = 18534

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = -2

Query: 481  PTSSGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKG 302
            P    + Q+ V  +    +P+   V KEAA    EP+  D P         +E  PK   
Sbjct: 3501 PLEQTQIQQEVPMVAAPLEPIQEEVPKEAAPS--EPTQEDVPKGAAPLEPTQEDVPKEAA 3558

Query: 301  NSNVSNEDLTKQEA 260
             S  + ED+ K+EA
Sbjct: 3559 PSGPTQEDVPKEEA 3572


>tr|Q8ISF6|Q8ISF6_CAEEL 2MDa_2 protein OS=Caenorhabditis elegans
            GN=isof PE=2 SV=1
          Length = 18519

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = -2

Query: 481  PTSSGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKG 302
            P    + Q+ V  +    +P+   V KEAA    EP+  D P         +E  PK   
Sbjct: 3501 PLEQTQIQQEVPMVAAPLEPIQEEVPKEAAPS--EPTQEDVPKGAAPLEPTQEDVPKEAA 3558

Query: 301  NSNVSNEDLTKQEA 260
             S  + ED+ K+EA
Sbjct: 3559 PSGPTQEDVPKEEA 3572


>tr|Q8ISF5|Q8ISF5_CAEEL 1MDa_1 protein OS=Caenorhabditis elegans
            GN=isof PE=2 SV=1
          Length = 10578

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = -2

Query: 481  PTSSGRAQETVRPITHEADPLNGIVEKEAAKDKEEPSSYDRPLSVVSHYDIKEASPKHKG 302
            P    + Q+ V  +    +P+   V KEAA    EP+  D P         +E  PK   
Sbjct: 3501 PLEQTQIQQEVPMVAAPLEPIQEEVPKEAAPS--EPTQEDVPKGAAPLEPTQEDVPKEAA 3558

Query: 301  NSNVSNEDLTKQEA 260
             S  + ED+ K+EA
Sbjct: 3559 PSGPTQEDVPKEEA 3572