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NBDC - LSDB Archive
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BP921078
Clone id YMU001_000145_C12
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATCGATCCCGAACACACGGGCAAGCTCCGATGTACGATTAACCAGATCTAGCTGATCCA
TGATCTGCAAGCTCAATCTTGCTCTATTCATGTAATACTCTAAGCAAAGATGTCTCTGTT
GGCCAGATCCACTTGTGAACCACTGTGTCAGTGTACGCCAAGAGACTAGAGGCACTTTCC
TCTTCAAGACTGCTTCAGCCACAGCTTCAAGAGTATAGATTCCCAGTTTAATTTCAGAGC
GCATAATTCGCCAGAGGTTCAGCACAATACGACCATCAACACAAATGCCACTTCCATGAG
TTCGACCCCACTCGCCATCTATTATAGGCTGCTCCACAATCTTCTCGATACTTGAGAGCT
TGTGCTTCATTTCCTTGCCAGCAGAATTTCCCATAGCACATGACAAATTCCTATTTGCAG
GTAATCTGGAGATCTCCCTCAACAAATCCAAGCCTAAATTTGCAGCACGTTCTGCAAGAA
AGCCCAGTGAATAACCTTGGATCTCCCACCCCACCAGCATGTCTGGATCATACATCCGC
■■Homology search results ■■ -
sp_hit_id O60673
Definition sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=Homo sapiens
Align length 178
Score (bit) 125.0
E-value 1.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921078|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_C12.
         (539 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=H...   125   1e-28
sp|Q61493|DPOLZ_MOUSE DNA polymerase zeta catalytic subunit OS=M...   122   1e-27
sp|P14284|DPOZ_YEAST DNA polymerase zeta catalytic subunit OS=Sa...   100   3e-21
sp|Q9P6L6|DPOZ_SCHPO DNA polymerase zeta catalytic subunit OS=Sc...    85   3e-16
sp|O48901|DPOD1_SOYBN DNA polymerase delta catalytic subunit OS=...    58   3e-08
sp|P28339|DPOD1_BOVIN DNA polymerase delta catalytic subunit OS=...    57   6e-08
sp|P54358|DPOD1_DROME DNA polymerase delta catalytic subunit OS=...    57   7e-08
sp|P30316|DPOD_SCHPO DNA polymerase delta catalytic subunit OS=S...    55   2e-07
sp|O54747|DPOD1_RAT DNA polymerase delta catalytic subunit OS=Ra...    55   2e-07
sp|P28340|DPOD1_HUMAN DNA polymerase delta catalytic subunit OS=...    55   3e-07
sp|P15436|DPOD_YEAST DNA polymerase delta catalytic subunit OS=S...    54   4e-07
sp|P97283|DPOD1_MESAU DNA polymerase delta catalytic subunit OS=...    54   4e-07
sp|P46588|DPOD_CANAL DNA polymerase delta catalytic subunit OS=C...    54   5e-07
sp|P52431|DPOD1_MOUSE DNA polymerase delta catalytic subunit OS=...    54   5e-07
sp|P90829|DPOD1_CAEEL DNA polymerase delta catalytic subunit OS=...    52   1e-06
sp|Q9LVN7|DPOD1_ARATH DNA polymerase delta catalytic subunit OS=...    52   2e-06
sp|Q9LRE6|DPOD1_ORYSJ DNA polymerase delta catalytic subunit OS=...    50   7e-06
sp|P07918|DPOL_HHV21 DNA polymerase OS=Human herpesvirus 2 (stra...    48   3e-05
sp|P09854|DPOL_HHV1S DNA polymerase OS=Human herpesvirus 1 (stra...    48   3e-05
sp|O33845|DPOL_THEAG DNA polymerase OS=Thermococcus aggregans GN...    48   3e-05
sp|P04292|DPOL_HHV1K DNA polymerase OS=Human herpesvirus 1 (stra...    48   3e-05
sp|P07917|DPOL_HHV1A DNA polymerase OS=Human herpesvirus 1 (stra...    48   3e-05
sp|P04293|DPOL_HHV11 DNA polymerase OS=Human herpesvirus 1 (stra...    48   3e-05
sp|P30317|DPOL_THELI DNA polymerase OS=Thermococcus litoralis GN...    46   1e-04
sp|Q51334|DPOL_PYRSD DNA polymerase OS=Pyrococcus sp. (strain GB...    46   1e-04
sp|Q9HH06|DPOL_PYRGL DNA polymerase OS=Pyrococcus glycovorans GN...    46   1e-04
sp|P30315|DPOD1_PLAFK DNA polymerase delta catalytic subunit OS=...    46   1e-04
sp|O48653|DPOLA_ORYSJ DNA polymerase alpha catalytic subunit OS=...    44   4e-04
sp|P77916|DPOL_PYRAB DNA polymerase 1 OS=Pyrococcus abyssi GN=po...    44   5e-04
sp|O59610|DPOL_PYRHO DNA polymerase OS=Pyrococcus horikoshii GN=...    42   0.002

>sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=Homo
            sapiens GN=REV3L PE=1 SV=2
          Length = 3130

 Score =  125 bits (314), Expect = 1e-28
 Identities = 72/178 (40%), Positives = 109/178 (61%)
 Frame = -2

Query: 538  RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
            + YDPD+L+G+EIQ +S G+L +RAA L +DL R ISR+P ++     + N    E    
Sbjct: 2394 KRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVPDDK-----IENRFAAERD-- 2446

Query: 358  LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
                           E+G    S I + GRI LNLWRIMR+E+ L  YT E V+  VL +
Sbjct: 2447 ---------------EYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSFHVLHQ 2491

Query: 178  KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
            + PL ++R L+ WF + +   R   +++Y++R R +LQ+++QLDL+ +TSE+AR+FGI
Sbjct: 2492 RFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARLFGI 2549


>sp|Q61493|DPOLZ_MOUSE DNA polymerase zeta catalytic subunit OS=Mus
            musculus GN=Rev3l PE=2 SV=2
          Length = 3122

 Score =  122 bits (306), Expect = 1e-27
 Identities = 70/178 (39%), Positives = 109/178 (61%)
 Frame = -2

Query: 538  RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
            + YDPD+L+G+EIQ +S G+L +RAA L +DL + ISR+P ++     + N    E    
Sbjct: 2386 KRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVPDDK-----IENRFAAERD-- 2438

Query: 358  LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
                           ++G    S I + GRI LNLWRIMR+E+ L  YT E V+  VL +
Sbjct: 2439 ---------------DYGSDTMSEINIVGRITLNLWRIMRNEVGLTNYTFENVSFHVLHQ 2483

Query: 178  KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
            + PL ++R L+ WF + +   R   +++Y++R R +LQ+++QLDL+ +TSE+AR+FGI
Sbjct: 2484 RFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARLFGI 2541


>sp|P14284|DPOZ_YEAST DNA polymerase zeta catalytic subunit
            OS=Saccharomyces cerevisiae GN=REV3 PE=1 SV=1
          Length = 1504

 Score =  100 bits (250), Expect = 3e-21
 Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
 Frame = -2

Query: 535  MYDPDMLVGWEIQGYSLGFLAERAANLG-LDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
            + DPD+L G+EI  +S G++ ER   +   D++RE++R+                ++K K
Sbjct: 758  LLDPDILSGFEIHNFSWGYIIERCQKIHQFDIVRELARVKC--------------QIKTK 803

Query: 358  LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
            LS              WG  H SGI + GR ++N+WR +RS++ L  YT+E+ A  +L +
Sbjct: 804  LSDT------------WGYAHSSGIMITGRHMINIWRALRSDVNLTQYTIESAAFNILHK 851

Query: 178  KVPLVSWRTLT-QWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGID 2
            ++P  S+ +LT  W    S  +    L Y+++RA++++Q++ + D + R  E AR+ GID
Sbjct: 852  RLPHFSFESLTNMWNAKKSTTELKTVLNYWLSRAQINIQLLRKQDYIARNIEQARLIGID 911


>sp|Q9P6L6|DPOZ_SCHPO DNA polymerase zeta catalytic subunit
            OS=Schizosaccharomyces pombe GN=rev3 PE=2 SV=1
          Length = 1480

 Score = 84.7 bits (208), Expect = 3e-16
 Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
 Frame = -2

Query: 538  RMYDPDMLVGWEIQGYSLGFLAERAA-NLGLDLLREISRLPANRNLSCAMGNSAGKEMKH 362
            R  DP ++ G+E+   S G+L ERA+     DL  ++SRL        +  N A KE   
Sbjct: 735  RQLDPTIVCGYEVHNSSWGYLIERASYRFNYDLPEQLSRLKCT-----SKANFAKKE--- 786

Query: 361  KLSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLK 182
                             W  T  S I + GR VLN+WRI+R E+ L  Y+LE V   + K
Sbjct: 787  ---------------NAWKYTTTSSINIVGRHVLNIWRILRGEVNLLNYSLENVVLNIFK 831

Query: 181  RKVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGID 2
            ++ P  +       + S    ++ + L Y +NR R  L+I+    +V +  E AR+ GID
Sbjct: 832  KQTPYYNQADKVHLWQSSRFHEKQILLNYMLNRTRYCLEILSACAIVTKIREQARIIGID 891


>sp|O48901|DPOD1_SOYBN DNA polymerase delta catalytic subunit
           OS=Glycine max GN=POLD1 PE=2 SV=1
          Length = 1088

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 40/178 (22%), Positives = 80/178 (44%)
 Frame = -2

Query: 538 RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
           R  DPD+++G+ I  + L +L ERA NL +     + R+  +R                 
Sbjct: 347 REVDPDIIIGYNICKFDLPYLIERALNLKIAEFPILGRIRNSR----------------- 389

Query: 358 LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
                ++ +      ++G      + V+GR+  +L ++M+ + KL  Y+L +V+   L  
Sbjct: 390 ----VRVKDTTFSSRQYGTRESKEVAVEGRVTFDLLQVMQRDYKLSSYSLNSVSSHFLSE 445

Query: 178 KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
           +   V    ++    +G+ + R     Y +  A L  +++D+L  +    E+ARV G+
Sbjct: 446 QKEDVHHSIISD-LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGV 502


>sp|P28339|DPOD1_BOVIN DNA polymerase delta catalytic subunit OS=Bos
           taurus GN=POLD1 PE=1 SV=1
          Length = 1106

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
 Frame = -2

Query: 538 RMYDPDMLVGWEIQGYSLGFLAERAANL---GLDLLREISRLPANRNLSCAMGNSAGKEM 368
           R+ DPD++ G+ IQ + L +L  RA  L   G  LL  +  L +N               
Sbjct: 385 RIMDPDVITGYNIQNFDLPYLISRAQTLKVPGFPLLGRVIGLRSN--------------- 429

Query: 367 KHKLSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAV 188
                    I E      + GR     + + GR+ +++ +++  E KL  YTL AV+   
Sbjct: 430 ---------IRESSFQSRQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHF 480

Query: 187 LKRKVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFG 8
           L  +   V    +T    +G+ Q R     Y +  A L L+++++L ++    E+ARV G
Sbjct: 481 LGEQKEDVQHSIITD-LQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTG 539

Query: 7   I 5
           +
Sbjct: 540 V 540


>sp|P54358|DPOD1_DROME DNA polymerase delta catalytic subunit
           OS=Drosophila melanogaster GN=DNApol-delta PE=1 SV=2
          Length = 1092

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 45/178 (25%), Positives = 78/178 (43%)
 Frame = -2

Query: 538 RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
           R  DPD+L G+ I  +   +L  RAA+L +     + R+   R++               
Sbjct: 370 REVDPDILTGYNINNFDFPYLLNRAAHLKVRNFEYLGRIKNIRSV--------------- 414

Query: 358 LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
                 I EQ +   + GR     +  +GR+  +L  ++  + KL  YTL AV+   L+ 
Sbjct: 415 ------IKEQMLQSKQMGRRENQYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYHFLQE 468

Query: 178 KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
           +   V    +T    +G  Q R     Y +  A L L+++++L  +    E+ARV G+
Sbjct: 469 QKEDVHHSIITD-LQNGDEQTRRRLAMYCLKDAYLPLRLLEKLMAIVNYMEMARVTGV 525


>sp|P30316|DPOD_SCHPO DNA polymerase delta catalytic subunit
           OS=Schizosaccharomyces pombe GN=pol3 PE=1 SV=2
          Length = 1086

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 43/178 (24%), Positives = 77/178 (43%)
 Frame = -2

Query: 538 RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
           R  DPD+L+G+ I  + + +L +RA +L +     + R+                   H 
Sbjct: 370 RDVDPDVLIGYNICNFDIPYLLDRAKSLRIHNFPLLGRI-------------------HN 410

Query: 358 LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
             S+ K  E       +G        + GR+ L++ ++M+ + KL  Y+L AV    L  
Sbjct: 411 FFSVAK--ETTFSSKAYGTRESKTTSIPGRLQLDMLQVMQRDFKLRSYSLNAVCSQFLGE 468

Query: 178 KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
           +   V +  +T    +G+   R     Y +  A L  ++MD+L      +E+ARV G+
Sbjct: 469 QKEDVHYSIITD-LQNGTADSRRRLAIYCLKDAYLPQRLMDKLMCFVNYTEMARVTGV 525


>sp|O54747|DPOD1_RAT DNA polymerase delta catalytic subunit
           OS=Rattus norvegicus GN=Pold1 PE=2 SV=1
          Length = 1103

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 43/175 (24%), Positives = 78/175 (44%)
 Frame = -2

Query: 529 DPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHKLSS 350
           DPD++ G+ IQ + L +L  RA  L +D    + R+   R+                   
Sbjct: 385 DPDVITGYNIQNFDLPYLISRAQTLKVDRFPFLGRVTGLRS------------------- 425

Query: 349 IEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKRKVP 170
              I +      + GR     + + GR+ +++ +++  E KL  YTL AV+   L  +  
Sbjct: 426 --NIRDSSFQSRQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKE 483

Query: 169 LVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
            V    +T    +G+ Q R     Y +  A L L+++++L ++    E+ARV G+
Sbjct: 484 DVQHSIITD-LQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGV 537


>sp|P28340|DPOD1_HUMAN DNA polymerase delta catalytic subunit
           OS=Homo sapiens GN=POLD1 PE=1 SV=2
          Length = 1107

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 46/178 (25%), Positives = 82/178 (46%)
 Frame = -2

Query: 538 RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
           R+ DPD++ G+ IQ + L +L  RA  L      ++   P        +G  AG     +
Sbjct: 386 RIMDPDVITGYNIQNFDLPYLISRAQTL------KVQTFPF-------LGRVAGLCSNIR 432

Query: 358 LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
            SS +          + GR     + + GR+ +++ +++  E KL  YTL AV+   L  
Sbjct: 433 DSSFQS--------KQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGE 484

Query: 178 KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
           +   V    +T    +G+ Q R     Y +  A L L+++++L ++    E+ARV G+
Sbjct: 485 QKEDVQHSIITD-LQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGV 541
tr_hit_id Q9CAG6
Definition tr|Q9CAG6|Q9CAG6_ARATH DNA polymerase OS=Arabidopsis thaliana
Align length 182
Score (bit) 196.0
E-value 8.0e-49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921078|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_C12.
         (539 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9CAG6|Q9CAG6_ARATH DNA polymerase OS=Arabidopsis thaliana GN...   196   8e-49
tr|Q766Z3|Q766Z3_ARATH DNA polymerase OS=Arabidopsis thaliana GN...   196   8e-49
tr|O64795|O64795_ARATH DNA polymerase OS=Arabidopsis thaliana GN...   196   8e-49
tr|A7PS77|A7PS77_VITVI DNA polymerase OS=Vitis vinifera GN=GSVIV...   188   1e-46
tr|B8B5T5|B8B5T5_ORYSI Putative uncharacterized protein OS=Oryza...   186   9e-46
tr|A3BN85|A3BN85_ORYSJ DNA polymerase OS=Oryza sativa subsp. jap...   186   9e-46
tr|A8IZI8|A8IZI8_CHLRE DNA polymerase (Fragment) OS=Chlamydomona...   139   7e-32
tr|Q0D7U2|Q0D7U2_ORYSJ Os07g0209500 protein (Fragment) OS=Oryza ...   129   1e-28
tr|B6PP23|B6PP23_BRAFL Putative uncharacterized protein OS=Branc...   128   2e-28
tr|B6LQQ9|B6LQQ9_BRAFL Putative uncharacterized protein OS=Branc...   128   2e-28
tr|Q59G53|Q59G53_HUMAN DNA polymerase (Fragment) OS=Homo sapiens...   125   1e-27
tr|B8B8E3|B8B8E3_ORYSI Putative uncharacterized protein OS=Oryza...   124   3e-27
tr|A3BHQ4|A3BHQ4_ORYSJ Putative uncharacterized protein OS=Oryza...   124   3e-27
tr|B7QFV4|B7QFV4_IXOSC DNA polymerase zeta catalytic subunit, pu...   122   2e-26
tr|A7S2J9|A7S2J9_NEMVE DNA polymerase (Fragment) OS=Nematostella...   121   2e-26
tr|A7EFB8|A7EFB8_SCLS1 DNA polymerase OS=Sclerotinia sclerotioru...   117   5e-25
tr|B2ABH1|B2ABH1_PODAN Predicted CDS Pa_1_20650 OS=Podospora ans...   116   7e-25
tr|Q2H423|Q2H423_CHAGB DNA polymerase OS=Chaetomium globosum GN=...   114   4e-24
tr|B8MMT3|B8MMT3_9EURO DNA polymerase zeta catalytic subunit, pu...   113   6e-24
tr|Q86AF1|Q86AF1_DICDI DNA polymerase OS=Dictyostelium discoideu...   113   7e-24
tr|Q55AZ3|Q55AZ3_DICDI DNA polymerase OS=Dictyostelium discoideu...   113   7e-24
tr|Q27RS8|Q27RS8_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   113   7e-24
tr|Q8X1U8|Q8X1U8_NEUCR DNA polymerase OS=Neurospora crassa GN=UP...   112   2e-23
tr|Q4FH88|Q4FH88_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   112   2e-23
tr|Q27RS7|Q27RS7_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   112   2e-23
tr|Q27RS6|Q27RS6_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   112   2e-23
tr|Q27RS5|Q27RS5_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   112   2e-23
tr|Q27RS4|Q27RS4_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   112   2e-23
tr|Q27RS3|Q27RS3_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   112   2e-23
tr|Q27RS2|Q27RS2_NEUCR DNA polymerase OS=Neurospora crassa GN=up...   112   2e-23

>tr|Q9CAG6|Q9CAG6_ARATH DNA polymerase OS=Arabidopsis thaliana
            GN=F12B7.5 PE=3 SV=1
          Length = 1871

 Score =  196 bits (497), Expect = 8e-49
 Identities = 97/182 (53%), Positives = 133/182 (73%), Gaps = 5/182 (2%)
 Frame = -2

Query: 532  YDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPA-----NRNLSCAMGNSAGKEM 368
            +DPD+L+GW+IQG S+GFLAERAA LG+  L  ISR P+     N +    +GN+    +
Sbjct: 1121 WDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL---L 1177

Query: 367  KHKLSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAV 188
               L +    VE+ +I+ EWGRTH SG+ V GRIVLN WR++R E+KL +YT+EAV+EAV
Sbjct: 1178 PDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAV 1237

Query: 187  LKRKVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFG 8
            L++KVP + ++ LT+WF+SG    R+ C+EY + RA L+L+IM QLD++NRTSELARVFG
Sbjct: 1238 LRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFG 1297

Query: 7    ID 2
            ID
Sbjct: 1298 ID 1299


>tr|Q766Z3|Q766Z3_ARATH DNA polymerase OS=Arabidopsis thaliana
            GN=AtREV3 PE=2 SV=1
          Length = 1890

 Score =  196 bits (497), Expect = 8e-49
 Identities = 97/182 (53%), Positives = 133/182 (73%), Gaps = 5/182 (2%)
 Frame = -2

Query: 532  YDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPA-----NRNLSCAMGNSAGKEM 368
            +DPD+L+GW+IQG S+GFLAERAA LG+  L  ISR P+     N +    +GN+    +
Sbjct: 1117 WDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL---L 1173

Query: 367  KHKLSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAV 188
               L +    VE+ +I+ EWGRTH SG+ V GRIVLN WR++R E+KL +YT+EAV+EAV
Sbjct: 1174 PDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAV 1233

Query: 187  LKRKVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFG 8
            L++KVP + ++ LT+WF+SG    R+ C+EY + RA L+L+IM QLD++NRTSELARVFG
Sbjct: 1234 LRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFG 1293

Query: 7    ID 2
            ID
Sbjct: 1294 ID 1295


>tr|O64795|O64795_ARATH DNA polymerase OS=Arabidopsis thaliana
            GN=T1F15.3 PE=3 SV=1
          Length = 1894

 Score =  196 bits (497), Expect = 8e-49
 Identities = 97/182 (53%), Positives = 133/182 (73%), Gaps = 5/182 (2%)
 Frame = -2

Query: 532  YDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPA-----NRNLSCAMGNSAGKEM 368
            +DPD+L+GW+IQG S+GFLAERAA LG+  L  ISR P+     N +    +GN+    +
Sbjct: 1121 WDPDVLLGWDIQGGSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL---L 1177

Query: 367  KHKLSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAV 188
               L +    VE+ +I+ EWGRTH SG+ V GRIVLN WR++R E+KL +YT+EAV+EAV
Sbjct: 1178 PDPLVANPAQVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAV 1237

Query: 187  LKRKVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFG 8
            L++KVP + ++ LT+WF+SG    R+ C+EY + RA L+L+IM QLD++NRTSELARVFG
Sbjct: 1238 LRQKVPSIPYKVLTEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFG 1297

Query: 7    ID 2
            ID
Sbjct: 1298 ID 1299


>tr|A7PS77|A7PS77_VITVI DNA polymerase OS=Vitis vinifera
            GN=GSVIVT00022797001 PE=3 SV=1
          Length = 1905

 Score =  188 bits (478), Expect = 1e-46
 Identities = 94/177 (53%), Positives = 127/177 (71%)
 Frame = -2

Query: 532  YDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHKLS 353
            +DPD+L+GW+IQG SLGFLAERA++LG+ LL +ISR P+                  +  
Sbjct: 1152 FDPDILIGWDIQGGSLGFLAERASHLGIGLLNKISRTPS------------------ETK 1193

Query: 352  SIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKRKV 173
            +  +  E P    EWGRTH SG+ V GRIVLN+WR+MR EIKL +YT E+VAEAVL++K+
Sbjct: 1194 TASRNFEIPEKRDEWGRTHASGVHVGGRIVLNVWRLMRGEIKLNMYTAESVAEAVLRQKI 1253

Query: 172  PLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGID 2
            P +  R LT+WF+SG G+ R+  +EY + RA+L+ +IM+QLD++NRTSELARVFGID
Sbjct: 1254 PSIRNRVLTKWFSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSELARVFGID 1310


>tr|B8B5T5|B8B5T5_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_27267 PE=4 SV=1
          Length = 1797

 Score =  186 bits (471), Expect = 9e-46
 Identities = 97/178 (54%), Positives = 130/178 (73%), Gaps = 2/178 (1%)
 Frame = -2

Query: 529  DPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMG--NSAGKEMKHKL 356
            DPD++VGWEIQ  SLGFLAERAA+LG+ LL+ ISR P ++     M   + + +E+    
Sbjct: 1014 DPDIIVGWEIQLGSLGFLAERAAHLGIGLLKRISRTPPHQMKHPPMNPVDESSQELPGA- 1072

Query: 355  SSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKRK 176
            SS + +++    +  W   H SGI VDGRI+LNLWR+MR+E+KL  Y+LEAVA  VL+RK
Sbjct: 1073 SSADDVIDDAS-ENNWSHAHASGIHVDGRIILNLWRLMRAEVKLNNYSLEAVANEVLRRK 1131

Query: 175  VPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGID 2
            VPLV  + L +WF +GSG+ R+ C+EY   R+ L+L+I++QLDLVNRTSELARVFGID
Sbjct: 1132 VPLVPTKILNRWFATGSGRGRYRCIEYVNKRSSLNLEILNQLDLVNRTSELARVFGID 1189


>tr|A3BN85|A3BN85_ORYSJ DNA polymerase OS=Oryza sativa subsp. japonica
            GN=OsJ_024507 PE=3 SV=1
          Length = 1731

 Score =  186 bits (471), Expect = 9e-46
 Identities = 97/178 (54%), Positives = 130/178 (73%), Gaps = 2/178 (1%)
 Frame = -2

Query: 529  DPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMG--NSAGKEMKHKL 356
            DPD++VGWEIQ  SLGFLAERAA+LG+ LL+ ISR P ++     M   + + +E+    
Sbjct: 1003 DPDIIVGWEIQLGSLGFLAERAAHLGIGLLKRISRTPPHQMKHPPMNPVDESSQELPGA- 1061

Query: 355  SSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKRK 176
            SS + +++    +  W   H SGI VDGRI+LNLWR+MR+E+KL  Y+LEAVA  VL+RK
Sbjct: 1062 SSADDVIDDAS-ENNWSHAHASGIHVDGRIILNLWRLMRAEVKLNNYSLEAVANEVLRRK 1120

Query: 175  VPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGID 2
            VPLV  + L +WF +GSG+ R+ C+EY   R+ L+L+I++QLDLVNRTSELARVFGID
Sbjct: 1121 VPLVPTKILNRWFATGSGRGRYRCIEYVNKRSSLNLEILNQLDLVNRTSELARVFGID 1178


>tr|A8IZI8|A8IZI8_CHLRE DNA polymerase (Fragment) OS=Chlamydomonas
           reinhardtii GN=POLZ1 PE=3 SV=1
          Length = 729

 Score =  139 bits (351), Expect = 7e-32
 Identities = 80/178 (44%), Positives = 103/178 (57%), Gaps = 2/178 (1%)
 Frame = -2

Query: 529 DPDMLVGWEIQGYSLGFLAERAANLGL--DLLREISRLPANRNLSCAMGNSAGKEMKHKL 356
           DPD++ GW++Q +SLG+LAERAA LGL   LLR   R P         G S+ KE ++  
Sbjct: 17  DPDVVCGWDVQRHSLGYLAERAAALGLAPPLLRAAGRTP---------GTSSVKERQND- 66

Query: 355 SSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKRK 176
                         EWG  H SG  V GR++LNLWR++R E+KLG YT E+ A AVL  +
Sbjct: 67  --------------EWGALHASGFHVTGRVLLNLWRVLRGELKLGSYTFESCAAAVLGLR 112

Query: 175 VPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGID 2
           VP V  + L  WF +G    R   L +   R RL L + +QLDLV RT+E+AR FGID
Sbjct: 113 VPRVREQQLALWFAAGPSAGRWRTLSWLCRRCRLQLAMAEQLDLVGRTAEMARTFGID 170


>tr|Q0D7U2|Q0D7U2_ORYSJ Os07g0209500 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os07g0209500 PE=4 SV=1
          Length = 164

 Score =  129 bits (324), Expect = 1e-28
 Identities = 73/148 (49%), Positives = 92/148 (62%)
 Frame = -2

Query: 529 DPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHKLSS 350
           DPD++VGWEIQ  SLGF AE A   G+ LL+ ISR P N+     M        +   +S
Sbjct: 21  DPDIIVGWEIQLGSLGFFAEGA---GIGLLKRISRTPPNQMKHPPMNPVEESCQEFPGAS 77

Query: 349 IEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKRKVP 170
               V     +  W  TH SGI VDGRI+LNLWR+MR+EIKL  Y+LEAVA+ VL RKVP
Sbjct: 78  SADDVIDDASESNWSHTHASGIHVDGRIILNLWRLMRAEIKLNNYSLEAVADEVL-RKVP 136

Query: 169 LVSWRTLTQWFTSGSGQQRHLCLEYYMN 86
           LV  + L +WF +G G+ R+ C+EY  N
Sbjct: 137 LVPTKILNRWFATGPGRGRYRCIEYVNN 164


>tr|B6PP23|B6PP23_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_273475 PE=4 SV=1
          Length = 813

 Score =  128 bits (321), Expect = 2e-28
 Identities = 72/178 (40%), Positives = 107/178 (60%)
 Frame = -2

Query: 538 RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
           R +DPD+LVG+E+Q  S G+L +RAA L +DL   +SR+P            A KE +  
Sbjct: 77  RQWDPDILVGYEVQMLSWGYLLQRAATLEMDLCPMLSRVP-----------DAAKESRFS 125

Query: 358 LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
                          EWG    S I + GRIV+N+WR+MR+E+ L  YT E VA   + +
Sbjct: 126 AEQ-----------DEWGADQMSEISIVGRIVINVWRLMRNELALNNYTFENVAFHAMHQ 174

Query: 178 KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
           +VPL S+RTL+ WF + +   R   +++++ R R +LQ+++Q+DL+ RTSELAR+FGI
Sbjct: 175 RVPLYSFRTLSDWFDNKTDLWR--TVDHFVTRCRGNLQLLEQMDLIGRTSELARLFGI 230


>tr|B6LQQ9|B6LQQ9_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_262795 PE=4 SV=1
          Length = 813

 Score =  128 bits (321), Expect = 2e-28
 Identities = 72/178 (40%), Positives = 107/178 (60%)
 Frame = -2

Query: 538 RMYDPDMLVGWEIQGYSLGFLAERAANLGLDLLREISRLPANRNLSCAMGNSAGKEMKHK 359
           R +DPD+LVG+E+Q  S G+L +RAA L +DL   +SR+P            A KE +  
Sbjct: 77  RKWDPDILVGYEVQMLSWGYLLQRAATLEMDLCPMLSRIP-----------DAAKESRFS 125

Query: 358 LSSIEKIVEQPIIDGEWGRTHGSGICVDGRIVLNLWRIMRSEIKLGIYTLEAVAEAVLKR 179
                          EWG    S I + GRIV+N+WR+MR+E+ L  YT E VA   + +
Sbjct: 126 ADQ-----------DEWGADQMSEISIVGRIVINVWRLMRNELALNNYTFENVAFHAMHQ 174

Query: 178 KVPLVSWRTLTQWFTSGSGQQRHLCLEYYMNRARLSLQIMDQLDLVNRTSELARVFGI 5
           +VPL S+RTL+ WF + +   R   +++++ R R +LQ+++Q+DL+ RTSELAR+FGI
Sbjct: 175 RVPLYSFRTLSDWFDNKTDLWR--TVDHFVTRCRGNLQLLEQMDLIGRTSELARLFGI 230