BP921081
Clone id YMU001_000145_D03
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTAAACCATAACAACTGCCAGTTCCATATTTCAAAGGACTTGTTTTTAAAATACAGGAGC
CTATGCACCAAGATAATTAGCCAAGAAGGTGAGAATGTTTGGTATGATTCACACTTGTAG
CCTAAACTAAGAATTGAAAAACGTCAGTCAAAATTTTGTACAACTTTCAGCTAATATGAT
CAAAACGCTCTATTTTTCACTGAACCATTAATGCTCTCTATCCTTGCAAGCTATGATGCT
CAGGAGAGCATGGAGGACTGCAGAAAAAGTCCATTCTGAGACTTCATCACGATATTTTGA
GCTCCTCCCTTTGACCAGGTAGGTGATGTGCCAAGGCAGAGGCCAAAGAAGTAGGTTTGC
TTTCATCACTTTTCCATACCAGCTCAAATGCAGATCCACCACTCAGATGTAGAAGGACAG
CAACATCAAGAACAGATGAACGAATTGCCAAGCCCTCCTTTTTGTTGAATGACTCGTTGT
ACACCTTTGAAAGCTCGTTCCAGAACCTCTCAGCATAAAAAGGTAT
■■Homology search results ■■ -
sp_hit_id A7H804
Definition sp|A7H804|ISCS_ANADF Cysteine desulfurase OS=Anaeromyxobacter sp. (strain Fw109-5)
Align length 62
Score (bit) 32.0
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921081|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_D03.
(499 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7H804|ISCS_ANADF Cysteine desulfurase OS=Anaeromyxobacter sp... 32 1.6
sp|Q3AYG9|PYRC_SYNS9 Dihydroorotase OS=Synechococcus sp. (strain... 32 2.1
sp|Q2GS33|VPS27_CHAGB Vacuolar protein sorting-associated protei... 31 2.8
sp|Q7U618|PYRC_SYNPX Dihydroorotase OS=Synechococcus sp. (strain... 30 6.3
sp|Q95LF9|DUFFY_GORGO Duffy antigen/chemokine receptor OS=Gorill... 30 6.3

>sp|A7H804|ISCS_ANADF Cysteine desulfurase OS=Anaeromyxobacter sp.
(strain Fw109-5) GN=iscS PE=3 SV=1
Length = 404

Score = 32.0 bits (71), Expect = 1.6
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = -1

Query: 499 IPFYAERFWNELSKVYNESFNKKEGLAIRSSVLDVAVLLHLSGGSAFELVWKSDESKPTS 320
+P++AE F N SK + +F + A+ ++ +VA L G SA E+VW S ++ +
Sbjct: 24 LPYFAEDFGNAASK--SHAFGWRAEEAVEAAREEVA---RLVGASAKEIVWTSGATESDN 78

Query: 319 LA 314
LA
Sbjct: 79 LA 80


>sp|Q3AYG9|PYRC_SYNS9 Dihydroorotase OS=Synechococcus sp. (strain
CC9902) GN=pyrC PE=3 SV=1
Length = 343

Score = 31.6 bits (70), Expect = 2.1
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -1

Query: 391 VLLHLSGGSAFELVWKSDESKPTSLASALAHHLPGQREELKIS**SLRMDFFCSPPCSPE 212
VL H++ A + V +D++ ++ HHL R + LR DF+C P E
Sbjct: 172 VLEHITTEQAVDFVGSADQNLAATITP---HHLHINRNAMFAG--GLRSDFYCLPVAKRE 226

Query: 211 HHSLQG*RALM 179
H L RA M
Sbjct: 227 RHRLALRRAAM 237


>sp|Q2GS33|VPS27_CHAGB Vacuolar protein sorting-associated protein
27 OS=Chaetomium globosum GN=VPS27 PE=3 SV=2
Length = 737

Score = 31.2 bits (69), Expect = 2.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1

Query: 280 PFDQVGDVPRQRPKK*VCFHHFSIPAQMQIHHSDVEGQQHQEQMNELPSPP 432
P D +G P P +FS AQ Q + QQ Q+Q ++PS P
Sbjct: 589 PNDSIGTTPTADPS---ASFYFSSQAQQQQQQQQQQQQQQQQQPQQVPSSP 636


>sp|Q7U618|PYRC_SYNPX Dihydroorotase OS=Synechococcus sp. (strain
WH8102) GN=pyrC PE=3 SV=1
Length = 343

Score = 30.0 bits (66), Expect = 6.3
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1

Query: 391 VLLHLSGGSAFELVWKSDESKPTSLASALAHHLPGQREELKIS**SLRMDFFCSPPCSPE 212
V H++ A + V SD + ++ HHL R + + LR DF+C P E
Sbjct: 172 VFEHITTEQAVDYVGSSDRNLAATITP---HHLQINRNSMFLG--GLRSDFYCLPVVKRE 226

Query: 211 HHSL 200
H L
Sbjct: 227 RHRL 230


>sp|Q95LF9|DUFFY_GORGO Duffy antigen/chemokine receptor OS=Gorilla
gorilla gorilla GN=DARC PE=3 SV=1
Length = 336

Score = 30.0 bits (66), Expect = 6.3
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -2

Query: 477 SGTSFQRCTTSHSTKRRAWQFVHLFLMLLSFYI*VVDLHLSWYG-KVMKANLLLWPLPW 304
SG S CT HST+ +A Q H L F + L L +G K +K L + P PW
Sbjct: 188 SGASGGLCTPIHSTELKALQATHTVACLAIFVL----LPLGLFGAKGLKKALGMGPGPW 242


tr_hit_id A7PID1
Definition tr|A7PID1|A7PID1_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera
Align length 55
Score (bit) 34.7
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921081|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_D03.
(499 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PID1|A7PID1_VITVI Chromosome chr13 scaffold_17, whole genom... 35 2.6
tr|Q4RTW9|Q4RTW9_TETNG Chromosome 12 SCAF14996, whole genome sho... 33 7.4
tr|Q065U6|Q065U6_9SYNE Dihydroorotase OS=Synechococcus sp. BL107... 33 7.4
tr|A4S5J6|A4S5J6_OSTLU Predicted protein OS=Ostreococcus lucimar... 33 9.7

>tr|A7PID1|A7PID1_VITVI Chromosome chr13 scaffold_17, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018295001
PE=3 SV=1
Length = 868

Score = 34.7 bits (78), Expect = 2.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -1

Query: 490 YAERFWNELSKVYNESFNKKEGLAIRSSVLDVAVLLHLSGGSAFELVWKSDESKP 326
Y ER +EL+ Y E+ ++ IR+ V+ + +LL G FE W P
Sbjct: 373 YVERLVDELAVTYKEAALRRAREEIRTHVIQMLILLQQCKGLQFEAAWNKHRDDP 427


>tr|Q4RTW9|Q4RTW9_TETNG Chromosome 12 SCAF14996, whole genome
shotgun sequence OS=Tetraodon nigroviridis
GN=GSTENG00029057001 PE=4 SV=1
Length = 530

Score = 33.1 bits (74), Expect = 7.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2

Query: 495 LFMLRGSGTSFQRCTTSHSTKRRAWQF 415
LF+LRGS SF T+S S +R AW F
Sbjct: 164 LFVLRGSDVSFNCSTSSRSARRLAWTF 190


>tr|Q065U6|Q065U6_9SYNE Dihydroorotase OS=Synechococcus sp. BL107
GN=BL107_14525 PE=3 SV=1
Length = 343

Score = 33.1 bits (74), Expect = 7.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -1

Query: 418 IRSSVLDVAVLL-HLSGGSAFELVWKSDESKPTSLASALAHHLPGQREELKIS**SLRMD 242
IR D+ V+L H++ A + V +D++ ++ HHL R + + LR D
Sbjct: 162 IRDRYPDLKVVLEHITTEQAVDFVGSADQNLAATITP---HHLHINRNAMFMG--GLRSD 216

Query: 241 FFCSPPCSPEHHSLQG*RALM 179
F+C P E H L RA M
Sbjct: 217 FYCLPVAKRERHRLALRRAAM 237


>tr|A4S5J6|A4S5J6_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_17567 PE=4 SV=1
Length = 428

Score = 32.7 bits (73), Expect = 9.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1

Query: 490 YAERFWNELSKVYNESFNKKEGLA--IRSSVLDVAVLLHLSGGSAFELVWKSDESKP 326
+ E W + + Y E+ + +R+ + V L+ L+ G F VWKSDE P
Sbjct: 354 HCESMWPHVKRAYAEADGRSAVSCDKLRAELERVVELVQLAAGGEFTRVWKSDEDVP 410