BP921088
Clone id YMU001_000145_D11
Library
Length 466
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGCAAGAAGTGGCAAGCTCAGAATAGGAAGGTATGTGAGAAGCGCCAAATGTGTCCAAA
GCAAGAAGAGTCCCCTGGCGGTATATGCTGAAGTGATCAAAGCCAATAAAGGCAGCCGCA
TAATGGAGACCATCAAATGCACACCTGTGACCTGTGCAAAAGAATACTTGTGTAGCAAAT
AGACTCCACTGGATCGTTGCAGGTAAATAGTCCACAGCAGCCTTTATGTCAACTTGACAG
TGCTGGGGTGATGTATATAGTGACTGTTGCTTGTCAGCTTGATAATGCTGAGGTGATGCA
TACAGCGACTGCTTTGCCAGAAGGCACCATGCTTCTAGGCCAGCAGTCAAAGCAATAATG
GGTCCATGTCTGCCTAGTAGCAAAAGGATAAGGCTACTCAACACTGCAACCAATGCAAGT
GATGCTTCTTCAAAAAACGTTGAAAGTCGAATCTCTGAATGTATCT
■■Homology search results ■■ -
sp_hit_id Q9JJI6
Definition sp|Q9JJI6|PIGO_MOUSE GPI ethanolamine phosphate transferase 3 OS=Mus musculus
Align length 59
Score (bit) 44.3
E-value 0.0003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921088|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_D11.
(466 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9JJI6|PIGO_MOUSE GPI ethanolamine phosphate transferase 3 OS... 44 3e-04
sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3 OS... 44 3e-04
sp|Q0AYQ7|MURC_SYNWW UDP-N-acetylmuramate--L-alanine ligase OS=S... 33 0.47
sp|P36812|VE6_HPV40 Protein E6 OS=Human papillomavirus type 40 G... 30 4.0
sp|P24969|NU1M_CYPCA NADH-ubiquinone oxidoreductase chain 1 OS=C... 29 8.7
sp|O35431|APBA2_RAT Amyloid beta A4 precursor protein-binding fa... 29 8.7
sp|Q5RD33|APBA2_PONAB Amyloid beta A4 precursor protein-binding ... 29 8.7
sp|P98084|APBA2_MOUSE Amyloid beta A4 precursor protein-binding ... 29 8.7
sp|Q99767|APBA2_HUMAN Amyloid beta A4 precursor protein-binding ... 29 8.7

>sp|Q9JJI6|PIGO_MOUSE GPI ethanolamine phosphate transferase 3 OS=Mus
musculus GN=Pigo PE=1 SV=2
Length = 1093

Score = 44.3 bits (103), Expect = 3e-04
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = -3

Query: 200 ATIQWSLFATQVFFCTGHRCAFDGLHYAAAFIGFDH---FSIYRQGTLLALDTFGASHI 33
A W L ATQ F+ TGH+ F +H+ AAF+GF S + L+ +TF ASH+
Sbjct: 892 AVSAWVLLATQTFYSTGHQPVFSAIHWHAAFVGFPDGHGSSTWLPALLVGANTF-ASHL 949


>sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3 OS=Homo
sapiens GN=PIGO PE=2 SV=3
Length = 1089

Score = 43.9 bits (102), Expect = 3e-04
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = -3

Query: 200 ATIQWSLFATQVFFCTGHRCAFDGLHYAAAFIGF--DHFS-IYRQGTLLALDTFGASHI 33
A W+L ATQ F+ TGH+ F +H+ AAF+GF H S + L+ +TF ASH+
Sbjct: 891 AVSAWALMATQTFYSTGHQPVFPAIHWHAAFVGFPEGHGSCTWLPALLVGANTF-ASHL 948


>sp|Q0AYQ7|MURC_SYNWW UDP-N-acetylmuramate--L-alanine ligase
OS=Syntrophomonas wolfei subsp. wolfei (strain
Goettingen) GN=murC PE=3 SV=1
Length = 465

Score = 33.5 bits (75), Expect = 0.47
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = -1

Query: 259 YIHHPSTVKLT*RLLWTIYLQRSSGVYLLHKYSFAQVTGVHLMVSIMRLPLLALITSAYT 80
Y HHP+ ++ T + R VY H+YS Q+ G L +++ LA+IT Y+
Sbjct: 333 YAHHPTEIRATIDAARNFHSGRVIVVYQPHRYSRTQLLGRQLGEALINAD-LAIITEVYS 391

Query: 79 A 77
A
Sbjct: 392 A 392


>sp|P36812|VE6_HPV40 Protein E6 OS=Human papillomavirus type 40
GN=E6 PE=3 SV=1
Length = 154

Score = 30.4 bits (67), Expect = 4.0
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2

Query: 384 FATRQTWTHYCFDCWPRSMVPSGKAVAVC 298
F + +WT YC CW + M ++ +C
Sbjct: 126 FKLKDSWTGYCLHCWKKCMEKGQRSETLC 154


>sp|P24969|NU1M_CYPCA NADH-ubiquinone oxidoreductase chain 1
OS=Cyprinus carpio GN=MT-ND1 PE=3 SV=1
Length = 324

Score = 29.3 bits (64), Expect = 8.7
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3

Query: 155 TGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGASHIPSYSELAT 9
+G + G +A F+ ++ +I TL A+ GASHIPS EL T
Sbjct: 215 SGFNVEYAGGPFALFFLA-EYANILLMNTLSAVLFLGASHIPSVPELTT 262


>sp|O35431|APBA2_RAT Amyloid beta A4 precursor protein-binding
family A member 2 OS=Rattus norvegicus GN=Apba2 PE=1
SV=1
Length = 750

Score = 29.3 bits (64), Expect = 8.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3

Query: 3 ARSGKLRIGRYVRSAKCVQSKKSPLAVYAEVIKA--NKGSRIMETIKCTPVT 152
ARSGKL IG + S PLA +IK N+ + + C PVT
Sbjct: 608 ARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVT 659


>sp|Q5RD33|APBA2_PONAB Amyloid beta A4 precursor protein-binding
family A member 2 OS=Pongo abelii GN=APBA2 PE=2 SV=1
Length = 749

Score = 29.3 bits (64), Expect = 8.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3

Query: 3 ARSGKLRIGRYVRSAKCVQSKKSPLAVYAEVIKA--NKGSRIMETIKCTPVT 152
ARSGKL IG + S PLA +IK N+ + + C PVT
Sbjct: 607 ARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVT 658


>sp|P98084|APBA2_MOUSE Amyloid beta A4 precursor protein-binding
family A member 2 OS=Mus musculus GN=Apba2 PE=1 SV=2
Length = 750

Score = 29.3 bits (64), Expect = 8.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3

Query: 3 ARSGKLRIGRYVRSAKCVQSKKSPLAVYAEVIKA--NKGSRIMETIKCTPVT 152
ARSGKL IG + S PLA +IK N+ + + C PVT
Sbjct: 608 ARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVT 659


>sp|Q99767|APBA2_HUMAN Amyloid beta A4 precursor protein-binding
family A member 2 OS=Homo sapiens GN=APBA2 PE=1 SV=3
Length = 749

Score = 29.3 bits (64), Expect = 8.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3

Query: 3 ARSGKLRIGRYVRSAKCVQSKKSPLAVYAEVIKA--NKGSRIMETIKCTPVT 152
ARSGKL IG + S PLA +IK N+ + + C PVT
Sbjct: 607 ARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVT 658


tr_hit_id A9THV7
Definition tr|A9THV7|A9THV7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 59
Score (bit) 95.1
E-value 1.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921088|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_D11.
(466 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9THV7|A9THV7_PHYPA Predicted protein OS=Physcomitrella paten... 95 1e-18
tr|Q33AP3|Q33AP3_ORYSJ Os10g0170300 protein OS=Oryza sativa subs... 92 1e-17
tr|B8BFW4|B8BFW4_ORYSI Putative uncharacterized protein OS=Oryza... 92 1e-17
tr|A7QA50|A7QA50_VITVI Chromosome undetermined scaffold_69, whol... 91 3e-17
tr|Q8LNL1|Q8LNL1_ORYSJ Putative uncharacterized protein OSJNBa00... 82 1e-14
tr|Q9FFI6|Q9FFI6_ARATH Genomic DNA, chromosome 5, P1 clone:MKP11... 72 1e-11
tr|Q00UV2|Q00UV2_OSTTA Glycosylphosphatidylinositol anchor synth... 54 3e-06
tr|A4S7V6|A4S7V6_OSTLU Predicted protein OS=Ostreococcus lucimar... 54 4e-06
tr|B8CG60|B8CG60_THAPS Predicted protein OS=Thalassiosira pseudo... 49 1e-04
tr|A7RLT5|A7RLT5_NEMVE Predicted protein OS=Nematostella vectens... 46 0.001
tr|B1H2Q3|B1H2Q3_XENTR LOC100145458 protein OS=Xenopus tropicali... 45 0.001
tr|Q5DU55|Q5DU55_MOUSE MFLJ00350 protein (Fragment) OS=Mus muscu... 45 0.001
tr|A8I9K8|A8I9K8_CHLRE Predicted protein OS=Chlamydomonas reinha... 45 0.002
tr|Q6GNZ1|Q6GNZ1_XENLA MGC80777 protein OS=Xenopus laevis GN=pig... 44 0.003
tr|Q562G0|Q562G0_MOUSE Phosphatidylinositol glycan anchor biosyn... 44 0.003
tr|A2AG37|A2AG37_MOUSE Phosphatidylinositol glycan class O (Frag... 44 0.003
tr|A0PJE1|A0PJE1_MOUSE Pigo protein (Fragment) OS=Mus musculus G... 44 0.003
tr|B1AML3|B1AML3_HUMAN Phosphatidylinositol glycan anchor biosyn... 44 0.004
tr|Q54Y33|Q54Y33_DICDI Phosphatidylinositol glycan, class O OS=D... 40 0.057
tr|B6NSI1|B6NSI1_BRAFL Putative uncharacterized protein OS=Branc... 39 0.098
tr|B6MG53|B6MG53_BRAFL Putative uncharacterized protein OS=Branc... 39 0.098
tr|A0C960|A0C960_PARTE Chromosome undetermined scaffold_16, whol... 38 0.22
tr|B0EC36|B0EC36_ENTDI Putative uncharacterized protein OS=Entam... 37 0.48
tr|B3RS53|B3RS53_TRIAD Putative uncharacterized protein OS=Trich... 36 0.83
tr|B0EC51|B0EC51_ENTDI GPI ethanolamine phosphate transferase, p... 36 0.83
tr|Q69RL2|Q69RL2_ORYSJ Os07g0467900 protein OS=Oryza sativa subs... 35 1.4
tr|A3BJK1|A3BJK1_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.4
tr|A4HD90|A4HD90_LEIBR Putative uncharacterized protein OS=Leish... 35 1.4
tr|A5GLL5|A5GLL5_SYNPW Uncharacterized conserved secreted protei... 35 2.4
tr|B7PGK9|B7PGK9_IXOSC Putative uncharacterized protein OS=Ixode... 34 3.1

>tr|A9THV7|A9THV7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_195214 PE=4 SV=1
Length = 709

Score = 95.1 bits (235), Expect = 1e-18
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = -3

Query: 209 YLPATIQWSLFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGASHI 33
+ + W+L A Q+FFCTGHRC FDGLH+ AAFIGFD F YRQG LLALDTFG+SHI
Sbjct: 536 HFAVAVDWNLVAVQLFFCTGHRCTFDGLHFTAAFIGFDEFYFYRQGALLALDTFGSSHI 594


>tr|Q33AP3|Q33AP3_ORYSJ Os10g0170300 protein OS=Oryza sativa subsp.
japonica GN=Os10g0170300 PE=4 SV=2
Length = 952

Score = 92.0 bits (227), Expect = 1e-17
Identities = 51/114 (44%), Positives = 63/114 (55%)
Frame = -3

Query: 374 GRHGPIIALTAGLEAWCLLAKQSLYASPQHYQADKQQSLYTSPQHCQVDIKAAVDYLPAT 195
GR GP +AL AWC++ Q Q ++++ H A D + T
Sbjct: 764 GRQGPFVALICMTIAWCIIKLQ---------QKNQRELKLDKGIH-------AADSVSVT 807

Query: 194 IQWSLFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGASHI 33
QWS A +F+ TGH C FDGL Y AAFIGFDHF I RQG LL++DTFG SHI
Sbjct: 808 -QWSFLAVCLFYLTGHWCTFDGLRYGAAFIGFDHFHIIRQGLLLSIDTFGVSHI 860


>tr|B8BFW4|B8BFW4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_32863 PE=4 SV=1
Length = 952

Score = 92.0 bits (227), Expect = 1e-17
Identities = 51/114 (44%), Positives = 63/114 (55%)
Frame = -3

Query: 374 GRHGPIIALTAGLEAWCLLAKQSLYASPQHYQADKQQSLYTSPQHCQVDIKAAVDYLPAT 195
GR GP +AL AWC++ Q Q ++++ H A D + T
Sbjct: 764 GRQGPFVALICMTIAWCIIKLQ---------QKNQRELKLDKGIH-------AADSVSVT 807

Query: 194 IQWSLFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGASHI 33
QWS A +F+ TGH C FDGL Y AAFIGFDHF I RQG LL++DTFG SHI
Sbjct: 808 -QWSFLAVCLFYLTGHWCTFDGLRYGAAFIGFDHFHIIRQGLLLSIDTFGVSHI 860


>tr|A7QA50|A7QA50_VITVI Chromosome undetermined scaffold_69, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00033756001 PE=4 SV=1
Length = 993

Score = 90.9 bits (224), Expect = 3e-17
Identities = 51/113 (45%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = -3

Query: 374 GRHGPIIALTAGLEAWCLLAKQSLYASPQHYQADKQQS-LYTSPQHCQVDIKAAVDYLPA 198
G+ GP++AL + + WC++ ++L +H D L SP LP
Sbjct: 753 GKQGPLVALASIVGGWCIMRLENL----EHESRDGSVGVLNLSP-------------LPV 795

Query: 197 TIQWSLFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGAS 39
T QWSL A +FFCTGH CAFDGL Y AAFIGFD F + RQ LL +DTFG S
Sbjct: 796 T-QWSLLAVSLFFCTGHWCAFDGLRYGAAFIGFDDFILIRQAILLTIDTFGFS 847


>tr|Q8LNL1|Q8LNL1_ORYSJ Putative uncharacterized protein
OSJNBa0071I20.7 (Putative uncharacterized protein)
OS=Oryza sativa subsp. japonica GN=OSJNBa0071I20.7 PE=4
SV=1
Length = 692

Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -3

Query: 218 AVDYLPATIQWSLFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGAS 39
A D + T QWS A +F+ TGH C FDGL Y AAFIGFDHF I RQG LL++DTFG S
Sbjct: 540 AADSVSVT-QWSFLAVCLFYLTGHWCTFDGLRYGAAFIGFDHFHIIRQGLLLSIDTFGVS 598

Query: 38 HI 33
HI
Sbjct: 599 HI 600


>tr|Q9FFI6|Q9FFI6_ARATH Genomic DNA, chromosome 5, P1 clone:MKP11
OS=Arabidopsis thaliana GN=At5g17250 PE=4 SV=1
Length = 884

Score = 72.0 bits (175), Expect = 1e-11
Identities = 40/116 (34%), Positives = 60/116 (51%)
Frame = -3

Query: 374 GRHGPIIALTAGLEAWCLLAKQSLYASPQHYQADKQQSLYTSPQHCQVDIKAAVDYLPAT 195
G+ G ++AL + +C++ + + + ++D Q C
Sbjct: 699 GKQGSMLALVYLVAGYCIMRLEGV---ERRTKSDGQSKFSKLNPLC-------------V 742

Query: 194 IQWSLFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGASHIPS 27
+QWSL + +FF +GH CAFDGL Y AAF+GFD F + RQ LL ++TFG S I S
Sbjct: 743 VQWSLLSICMFFASGHWCAFDGLRYGAAFVGFDEFVLIRQAILLTIETFGFSIILS 798


>tr|Q00UV2|Q00UV2_OSTTA Glycosylphosphatidylinositol anchor
synthesis protein (ISS) OS=Ostreococcus tauri
GN=Ot15g02560 PE=4 SV=1
Length = 736

Score = 54.3 bits (129), Expect = 3e-06
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Frame = -3

Query: 182 LFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFG-----ASHIPSYSE 18
L + +FF GH C+F+GLH+AAAF GF F+ Y G LL L+T+ A+ +P ++
Sbjct: 583 LATSVIFFGGGHTCSFNGLHFAAAFTGFRKFNYYGMGFLLGLETWSGEVLLAAFVPMFAH 642

Query: 17 LATS 6
TS
Sbjct: 643 HLTS 646


>tr|A4S7V6|A4S7V6_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_51391 PE=4 SV=1
Length = 645

Score = 53.9 bits (128), Expect = 4e-06
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = -3

Query: 182 LFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFGASHI 33
L +T VFF GH C+FDGLH+A AF GF F+ Y G LL +T+ I
Sbjct: 499 LASTVVFFGGGHTCSFDGLHFAVAFTGFRKFNFYGMGFLLGFETWSGEII 548


>tr|B8CG60|B8CG60_THAPS Predicted protein OS=Thalassiosira pseudonana
CCMP1335 GN=THAPSDRAFT_11996 PE=4 SV=1
Length = 1047

Score = 48.9 bits (115), Expect = 1e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = -3

Query: 188 WSLFATQVFFCTGHRCAFDGLHYAAAFIGFDHFSIYRQGTLLALDTFG 45
W L VFF T H C+F+ LH++AAF+ + F + G L ++TFG
Sbjct: 905 WRLAIRHVFFATNHHCSFNRLHFSAAFVATETFEFHIAGASLFMNTFG 952


>tr|A7RLT5|A7RLT5_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g160250 PE=4 SV=1
Length = 1115

Score = 45.8 bits (107), Expect = 0.001
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = -3

Query: 188 WSLFATQVFFCTGHRCAFDGLHYAAAFIGF--DHFSIYRQGTLLALDTFGASHI 33
WSL ++Q F+ TGH+ G+ + AAF+G D +I G L+ L+TF ASH+
Sbjct: 934 WSLLSSQYFYSTGHQATIPGIRFEAAFVGLPGDMSNIVLPGLLIFLNTF-ASHV 986