BP921090 |
Clone id |
YMU001_000145_E01 |
Library |
YMU01 |
Length |
456 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000145_E01. |
Accession |
BP921090 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1942Contig1 |
Sequence |
AATTCGCGGCCGCGAATTCCGCCCACATTTCTCTCTTCCGCTATGCATTGTCGACAGCTC GCTCTTGTTCTCATCTTCTGTGTTTTCTCTCTCTGCGCCATGGCGACGATGAAGCAACTG TGTATATCGTCTACCTGGAGAGGCAATGTGGAAGTGCGCCTGAAGCCTTGGAGGCATCTC ACCTCGAAACCCTCACCTCCGTGCTTGGCAGTGAAGAAGCAGCAAGGGCTTCCCTTCTTT ACAGTTATAAGACAGCAACAAACGGGTTTTCCGCGAAGCTTACACCGTCACAAGCTTCTG TATTGAAAGAGAAACCTGGAGTGCTTCAGGTTGTTCCAAGTCAGACCTACCAGCTGCAGA AACAACCAATCAGTAAAACAAGTATGACCTAGTTCATTGTCACTCAAAATAAAGTCATTA GTAGGTCACTCTCAAGTTTCTGCACTCGATGATGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39547 |
Definition |
sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo |
Align length |
84 |
Score (bit) |
48.9 |
E-value |
9.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921090|Adiantum capillus-veneris mRNA, clone: YMU001_000145_E01. (437 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 49 9e-06 sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis tha... 48 2e-05 sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis th... 47 5e-05 sp|Q38732|DAG_ANTMA DAG protein, chloroplastic OS=Antirrhinum ma... 40 0.006 sp|P13605|FMOD_BOVIN Fibromodulin OS=Bos taurus GN=FMOD PE=1 SV=2 33 0.52 sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabid... 33 0.68 sp|P50609|FMOD_RAT Fibromodulin OS=Rattus norvegicus GN=Fmod PE=... 33 0.68 sp|P50608|FMOD_MOUSE Fibromodulin OS=Mus musculus GN=Fmod PE=2 SV=1 33 0.68 sp|Q5EDF9|TRH_DANRE Prothyroliberin OS=Danio rerio GN=trh PE=2 SV=1 32 1.5 sp|P68907|PZRN3_RAT PDZ domain-containing RING finger protein 3 ... 32 1.5 sp|Q5KQT6|CP1A2_FELCA Cytochrome P450 1A2 OS=Felis silvestris ca... 32 1.5 sp|Q06828|FMOD_HUMAN Fibromodulin OS=Homo sapiens GN=FMOD PE=1 SV=2 31 2.0 sp|A6TE50|MUG_KLEP7 G/U mismatch-specific DNA glycosylase OS=Kle... 30 4.4 sp|A7MJU3|MUG_ENTS8 G/U mismatch-specific DNA glycosylase OS=Ent... 30 4.4 sp|Q9Q717|TAT_HV1V9 Protein Tat OS=Human immunodeficiency virus ... 30 5.7 sp|Q8WWP5|CH006_HUMAN Uncharacterized protein C8orf6 OS=Homo sap... 30 5.7 sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=C... 29 7.5 sp|Q8QFQ9|TRH_ONCNE Prothyroliberin type A OS=Oncorhynchus nerka... 29 7.5 sp|Q4KJM5|OPGH_PSEF5 Glucans biosynthesis glucosyltransferase H ... 29 7.5 sp|Q9LMN7|WAK5_ARATH Wall-associated receptor kinase 5 OS=Arabid... 29 9.8 sp|Q9LKA5|UMP1_ARATH Uncharacterized protein At3g15000, mitochon... 29 9.8 sp|Q91YE8|SYNP2_MOUSE Synaptopodin-2 OS=Mus musculus GN=Synpo2 P... 29 9.8 sp|Q6AWX6|SCAR1_ARATH Protein SCAR1 OS=Arabidopsis thaliana GN=S... 29 9.8 sp|Q1Q9E2|HUTI_PSYCK Imidazolonepropionase OS=Psychrobacter cryo... 29 9.8 sp|Q9Z0W0|GLP2R_RAT Glucagon-like peptide 2 receptor OS=Rattus n... 29 9.8 sp|Q3J7V7|GATA_NITOC Glutamyl-tRNA(Gln) amidotransferase subunit... 29 9.8
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 Length = 731
Score = 48.9 bits (115), Expect = 9e-06 Identities = 29/84 (34%), Positives = 46/84 (54%) Frame = +2
Query: 86 DDEATVYIVYLERQCGSAPEALEASHLETLTSVLGSEEAARASLLYSYKTATNGFSAKLT 265 DD +YIVY+ R+ P++ H L V+GS A S+L++YK + NGF+ KLT Sbjct: 28 DDGKNIYIVYMGRKLED-PDSAHLHHRAMLEQVVGSTFAPE-SVLHTYKRSFNGFAVKLT 85
Query: 266 PSQASVLKEKPGVLQVVPSQTYQL 337 +A + GV+ V ++ +L Sbjct: 86 EEEAEKIASMEGVVSVFLNEMNEL 109
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 Length = 757
Score = 47.8 bits (112), Expect = 2e-05 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Frame = +2
Query: 56 LLC--FLSLRHGDDEATVYIVYLER-QCGSAPEALEASHLETLTSVLGSEEAARASLLYS 226 LLC F + + YIV++ + Q S+ + + +L S+ S E LLY+ Sbjct: 14 LLCLGFCHVSSSSSDQGTYIVHMAKSQMPSSFDLHSNWYDSSLRSISDSAE-----LLYT 68
Query: 227 YKTATNGFSAKLTPSQASVLKEKPGVLQVVPSQTYQL 337 Y+ A +GFS +LT +A L +PGV+ V+P Y+L Sbjct: 69 YENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYEL 105
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 Length = 749
Score = 46.6 bits (109), Expect = 5e-05 Identities = 27/78 (34%), Positives = 46/78 (58%) Frame = +2
Query: 104 YIVYLERQCGSAPEALEASHLETLTSVLGSEEAARASLLYSYKTATNGFSAKLTPSQASV 283 YI+YL + + E ++ +H+ L+S+ S+E A+ +YSY A N F+AKL+P +A Sbjct: 38 YIIYLGDRPDNTEETIK-THINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKK 96
Query: 284 LKEKPGVLQVVPSQTYQL 337 + E V+ V +Q +L Sbjct: 97 MMEMEEVVSVSRNQYRKL 114
>sp|Q38732|DAG_ANTMA DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1 Length = 230
Score = 39.7 bits (91), Expect = 0.006 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Frame = +2
Query: 104 YIVYLERQCGSAP--EALEASHLETLTSVLGSEEAARASLLYSYKTAT-NGFSAKLTPSQ 274 +++ +E AP E + ++L TL +VLGS E A+ + +Y++ T T GF +T Sbjct: 89 WLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKN-MYAFSTTTYTGFQCTVTEET 147
Query: 275 ASVLKEKPGVLQVVP 319 + K PGVL V+P Sbjct: 148 SEKFKGLPGVLWVLP 162
>sp|P13605|FMOD_BOVIN Fibromodulin OS=Bos taurus GN=FMOD PE=1 SV=2 Length = 376
Score = 33.1 bits (74), Expect = 0.52 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%) Frame = +2
Query: 113 YLERQCGSAPEALEASHLE--TLTSVLGSEEAARASLLY---SYKTATNGFSAKLTPSQA 277 +L + P ALE +LE + SV S LLY S+ + TN A T + + Sbjct: 234 HLRKVPDGLPSALEQLYLEHNNVFSVPDSYFRGSPKLLYVRLSHNSLTNNGLASNTFNSS 293
Query: 278 SVLKEKPGVLQVVPSQTYQLQKQPISKTSMT*FIVTQNKVISRSLSSFCT 427 S+L+ + QLQK P T++ + N++ S+SSFCT Sbjct: 294 SLLE--------LDLSYNQLQKIPPVSTNLENLYLQGNRINEFSISSFCT 335
>sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1 Length = 732
Score = 32.7 bits (73), Expect = 0.68 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -2
Query: 214 GSPCCFFTAKHGGEGFEVRCLQGFRRTSTLPLQVDDIHSC 95 G+ CF + GG G+ +CL+GF LP DI+ C Sbjct: 245 GNSTCFDST--GGTGYNCKCLEGFEGNPYLPNGCQDINEC 282
>sp|P50609|FMOD_RAT Fibromodulin OS=Rattus norvegicus GN=Fmod PE=2 SV=1 Length = 376
Score = 32.7 bits (73), Expect = 0.68 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%) Frame = +2
Query: 113 YLERQCGSAPEALEASHLE--TLTSVLGSEEAARASLLY---SYKTATNGFSAKLTPSQA 277 +L R P ALE +LE + +V S LLY S+ + TN A T + + Sbjct: 234 HLRRVPDGLPSALEQLYLEHNNVYTVPDSYFRGSPKLLYVRLSHNSLTNNGLATNTFNSS 293
Query: 278 SVLKEKPGVLQVVPSQTYQLQKQPISKTSMT*FIVTQNKVISRSLSSFCT 427 S+L+ + QLQK P T++ + N++ S+SSFCT Sbjct: 294 SLLE--------LDLSYNQLQKIPPVNTNLENLYLQGNRINEFSISSFCT 335
>sp|P50608|FMOD_MOUSE Fibromodulin OS=Mus musculus GN=Fmod PE=2 SV=1 Length = 376
Score = 32.7 bits (73), Expect = 0.68 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%) Frame = +2
Query: 113 YLERQCGSAPEALEASHLE--TLTSVLGSEEAARASLLY---SYKTATNGFSAKLTPSQA 277 +L R P ALE +LE + +V S LLY S+ + TN A T + + Sbjct: 234 HLRRVPDGLPSALEQLYLEHNNVYTVPDSYFRGSPKLLYVRLSHNSLTNNGLATNTFNSS 293
Query: 278 SVLKEKPGVLQVVPSQTYQLQKQPISKTSMT*FIVTQNKVISRSLSSFCT 427 S+L+ + QLQK P T++ + N++ S+SSFCT Sbjct: 294 SLLE--------LDLSYNQLQKIPPVNTNLENLYLQGNRINEFSISSFCT 335
>sp|Q5EDF9|TRH_DANRE Prothyroliberin OS=Danio rerio GN=trh PE=2 SV=1 Length = 199
Score = 31.6 bits (70), Expect = 1.5 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = -1
Query: 119 PGRRYTQLLHRR-HGAERENTE-DENKSEL-STMHSGREKC 6 PG+RY LLH+R H RE E D + +EL H G+ +C Sbjct: 119 PGKRYLMLLHKRQHPGRRELQEADGDSAELEKRQHPGKRRC 159
>sp|P68907|PZRN3_RAT PDZ domain-containing RING finger protein 3 OS=Rattus norvegicus GN=Pdzrn3 PE=1 SV=1 Length = 1062
Score = 31.6 bits (70), Expect = 1.5 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +2
Query: 128 CGSAPEALEASHLETLTSVL-GSEEAARASLLYSYKTATNGFSAKLTPSQASVLKEKPGV 304 C S P LE S +L V GS E A A+ + +Y+ + A + S PG Sbjct: 764 CRSTPLTLEISPDNSLRRVAEGSSEGATAN-MEAYRPSPKNLLAITEDPEVSTPNYNPGA 822
Query: 305 LQVVPSQTYQLQKQPISKTS 364 ++ PSQ +++++ +S S Sbjct: 823 KELDPSQALEIKERRVSDGS 842
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKZ5 |
Definition |
tr|A9NKZ5|A9NKZ5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
87 |
Score (bit) |
101.0 |
E-value |
2.0e-20 |
Report |
|