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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921092
Clone id YMU001_000145_E03
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_E03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTGTTTGTAGGAATTGGATGATGCGGAAGAGATACCTCAAGATGAGT
TCTTGCTGTTGGTGTAAGGTCTTTCTCAAGAGGAGCAAGTGAATACCATAATTTCTATTG
CCTCTCACCATTGAGATGAAGCATCCAAGTCCATCTCTCAATCTGTCGGCACTAAAATCA
ACCCCAACCATAGTGATACATTTCCTTTCAACTGCAAGTAATACCTTACATAACAACTCA
GCTGTTGTTATCGCTGCAGAAGTACCTTTCTTGTAAACTACATCATCGGATTTGTTAATT
CCTGAACCAACAAACCTAATTTTCTTAAACCAATAATCTTCAAGTGCAATATTTTGGTCA
TATTCAAGTTCATTGAATATCCACCACCATGCTTTTGCATATTGAACATTGAACATAGTA
GAGAACACCTTGCTCAGACCCACCAAAGAGCTATAAGCTTCAACGTCTTCTTACAAGACG
AGTGTCAAATAGTAAGACAACATTTTCAACAGAGCATTCC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921092|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_E03.
         (501 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B3RRL7
Definition tr|B3RRL7|B3RRL7_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens
Align length 57
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921092|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_E03.
         (501 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3RRL7|B3RRL7_TRIAD Putative uncharacterized protein OS=Trich...    36   1.1  
tr|A2EFE1|A2EFE1_TRIVA Putative uncharacterized protein OS=Trich...    34   3.3  
tr|B5BR93|B5BR93_9ACTO Mn2+ or Fe2+ transporter OS=Streptomyces ...    34   4.4  
tr|A8SLP2|A8SLP2_9FIRM Putative uncharacterized protein OS=Parvi...    34   4.4  
tr|A5FI49|A5FI49_FLAJ1 Amino acid adenylation domain OS=Flavobac...    33   9.7  
tr|A3K750|A3K750_9RHOB Dihydropyrimidinase OS=Sagittula stellata...    33   9.7  
tr|B3KYY4|B3KYY4_PLAKH Putative uncharacterized protein OS=Plasm...    33   9.7  
tr|A0EIF5|A0EIF5_PARTE Chromosome undetermined scaffold_99, whol...    33   9.7  
tr|Q4PB94|Q4PB94_USTMA Putative uncharacterized protein OS=Ustil...    33   9.7  

>tr|B3RRL7|B3RRL7_TRIAD Putative uncharacterized protein
           OS=Trichoplax adhaerens GN=TRIADDRAFT_54286 PE=4 SV=1
          Length = 388

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -3

Query: 367 WWIFNELEYDQNIALEDYWFKKIRFVGSGINKSDDVVYKKGTSAAITTAELLCKVLL 197
           +W+     YD N+A+  +W + ++F  S   K+ DV Y         T ELL   +L
Sbjct: 252 FWLHQVRSYDSNLAVNMWWIQLLKFNESSCEKNKDVNYLNTADYEFATYELLRNSIL 308


>tr|A2EFE1|A2EFE1_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_239980 PE=4 SV=1
          Length = 484

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
 Frame = -3

Query: 394 FNVQYAKAWWWIFNELEYDQNIA----LEDYWFKKIRFVGSGINKS 269
           +N++Y K+++ IF +  Y+ N+A    L++Y+F KI+  GS  N S
Sbjct: 66  YNIKYLKSYYLIFKKFCYEYNVASYYSLQEYYFYKIQ--GSSFNPS 109


>tr|B5BR93|B5BR93_9ACTO Mn2+ or Fe2+ transporter OS=Streptomyces
           albulus PE=4 SV=1
          Length = 560

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 283 GINKSDDVVYKKGTSAAITTAELLCKVLLAVERKCITMVGVDFSADRLRDGLGCFISMVR 104
           G  + DD   ++G SA + T      +L  V    I MVG         +  G F +  +
Sbjct: 32  GTIRHDDTAPRRGLSAKLKT------LLAVVGPGLIVMVG--------DNDAGAFTTYGQ 77

Query: 103 GNRNYGIH----LLLLRKTLHQQQELILR 29
             +NYG H    LLLL   L+  QE++LR
Sbjct: 78  AGQNYGTHLLWTLLLLVPVLYVNQEMVLR 106


>tr|A8SLP2|A8SLP2_9FIRM Putative uncharacterized protein
           OS=Parvimonas micra ATCC 33270 GN=PEPMIC_01056 PE=4 SV=1
          Length = 272

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
 Frame = -3

Query: 493 LLKMLSYYLTLVL*EDVEAYSSLVGLSKVFSTMFNVQYAKAWWWIFNELEYDQNIALEDY 314
           +LK L +    V   DV    +++ L    S  FN    K +  +F+EL+ D+N    D 
Sbjct: 73  ILKTLEFADNFV---DVSQVYTIINLENRNSKKFNSNEVKNFVGLFDELDTDENNTCNDV 129

Query: 313 WFKKIRFVGSGINKS--DDVVYKKGTSA-AITTAELLCKVLLAVERKCITMVGVDFSADR 143
           +    + +   IN    D  ++KK   A A  +   + K+   +E + +    +DF+ D 
Sbjct: 130 FKAIAKEISPQINSKNWDKELWKKTLKAKADDSKRTMNKIFKTIEEERLIKNPIDFNVDE 189

Query: 142 LRDGL 128
             + +
Sbjct: 190 YSENI 194


>tr|A5FI49|A5FI49_FLAJ1 Amino acid adenylation domain
            OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
            2064 / UW101) GN=Fjoh_2089 PE=3 SV=1
          Length = 2138

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 15/56 (26%), Positives = 31/56 (55%)
 Frame = -3

Query: 469  LTLVL*EDVEAYSSLVGLSKVFSTMFNVQYAKAWWWIFNELEYDQNIALEDYWFKK 302
            L L++ E V+ Y++L         + N+QY     W+ NELE ++++  +++W  +
Sbjct: 1242 LELLISEVVKIYNALNEGKDADLPVLNIQYKDYAVWLSNELEQEKHLVSKEFWMNQ 1297


>tr|A3K750|A3K750_9RHOB Dihydropyrimidinase OS=Sagittula stellata
           E-37 GN=SSE37_13306 PE=4 SV=1
          Length = 485

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -3

Query: 259 VYKKGTSAAITTAELLCKVLLAVERKCITMVGVDFSADRLRDGLGCFI 116
           V K GT   + TA+L  K  +AVE   IT +G     D+  D  GC++
Sbjct: 5   VIKNGT---VVTADLSYKADVAVENGIITEIGEGLKGDKELDATGCYV 49


>tr|B3KYY4|B3KYY4_PLAKH Putative uncharacterized protein
           OS=Plasmodium knowlesi (strain H) GN=PKH_010220 PE=4
           SV=1
          Length = 2948

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +2

Query: 215 QLSCCYRCRSTFLVNYIIGFVNS*TNKPNF-----LKPIIFKCNILVIFKFIEYPPPCFC 379
           +L   ++  + F +N      N   +K NF     L   +F+CN+  +FKF+ Y    +C
Sbjct: 782 ELLVLFKMNTKFCINTFENLKNENISKVNFVYINLLILSLFECNLFYVFKFMSY----YC 837

Query: 380 ILNIEH 397
           ++N  H
Sbjct: 838 LINSFH 843


>tr|A0EIF5|A0EIF5_PARTE Chromosome undetermined scaffold_99, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00027425001 PE=4 SV=1
          Length = 269

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +2

Query: 218 LSCCYRCRSTFLVNYIIGFVNS*TNKPNFLKPIIFKCNILVIFKFIEYPP 367
           LS    C  T +  + +G+V   TN PN  KP++F+ NI     +I Y P
Sbjct: 32  LSFAAYCPDTAINTWTVGYVT--TNYPNIEKPLVFENNIAGTKGYIAYNP 79


>tr|Q4PB94|Q4PB94_USTMA Putative uncharacterized protein OS=Ustilago
            maydis GN=UM02619.1 PE=4 SV=1
          Length = 1846

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 247  GTSAAITTAELLCKVLLAVERKCITMVGVDFSADRLRDGLGCFISMVR 104
            G +AA+      CKVLL V +K  + +   F  D +RDGL  ++  ++
Sbjct: 1588 GATAAMAVNSKKCKVLLQVLKKAPSSIFFRFPVDPIRDGLPTYLDEIQ 1635