BP921093
Clone id YMU001_000145_E04
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000145_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGCAAAAGAATATCTATAACACGATTTACAAAATAGTCCTTGTACAGGATATAGCACTT
ATACCATGAAGCCGTGTATGGTTTGAAGCCATCTCCATGAGCAAATGTGTACTTGCACAC
AATGTCAGCATGTTATACTGACGTTTATTGACATATCTGCCTGGAGCATCATGCTTCCAG
ATGAGCAGTGATCCAAACAAAGAAATCCCAAATCACGAAAGCTCACATTTCAAGGAGCGG
CAGTCAGAACAGAACTTCTTTCAGCCTCCAATTGCTTTGCAAGCATTTAAAACCGTCATA
ACTGTGTCATCGATCCTGCCGTTGACCTCTATTTGGATCTGATACCATATCCATCATCAT
CTTTTCAGGCGAATCTGACCAATTGCCGAATGACTGCAAGTCAACCTTGCGTCTCTGCTC
CACAAACAAATCCTTCCTGCCTTGAAACTGTGCTTGCTTTTCCATGGTCGCTGCCCCTCC
GAAGCCCCATACCTCCACATCTATCACTTTCCC
■■Homology search results ■■ -
sp_hit_id A0AI91
Definition sp|A0AI91|LUXS_LISW6 S-ribosylhomocysteine lyase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
Align length 47
Score (bit) 33.1
E-value 0.77
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921093|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_E04.
(513 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A0AI91|LUXS_LISW6 S-ribosylhomocysteine lyase OS=Listeria wel... 33 0.77
sp|Q8Y7I9|LUXS_LISMO S-ribosylhomocysteine lyase OS=Listeria mon... 33 1.0
sp|Q720D3|LUXS_LISMF S-ribosylhomocysteine lyase OS=Listeria mon... 33 1.0
sp|Q92C64|LUXS_LISIN S-ribosylhomocysteine lyase OS=Listeria inn... 33 1.0
sp|Q12108|YO118_YEAST Uncharacterized protein YOR118W OS=Sacchar... 32 1.8
sp|P0C548|PLPL2_RAT Patatin-like phospholipase domain-containing... 30 5.0
sp|O52164|DNAJ2_STRAL Chaperone protein dnaJ 2 OS=Streptomyces a... 30 5.0
sp|Q8BJ56|PLPL2_MOUSE Patatin-like phospholipase domain-containi... 30 6.5
sp|Q96AD5|PLPL2_HUMAN Patatin-like phospholipase domain-containi... 30 6.5
sp|Q2KI18|PLPL2_BOVIN Patatin-like phospholipase domain-containi... 30 6.5

>sp|A0AI91|LUXS_LISW6 S-ribosylhomocysteine lyase OS=Listeria
welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 /
SLCC5334) GN=luxS PE=3 SV=1
Length = 155

Score = 33.1 bits (74), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2

Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45
I+K+D + NK +M L + HL+ E+A NHT +L IS + C
Sbjct: 36 IYKYDVRFKQPNKEHMDMPALHSLEHLMAELARNHTDKLVDISPMGC 82


>sp|Q8Y7I9|LUXS_LISMO S-ribosylhomocysteine lyase OS=Listeria
monocytogenes GN=luxS PE=3 SV=1
Length = 155

Score = 32.7 bits (73), Expect = 1.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2

Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45
I+K+D + NK M L + HL+ E+A NHT +L IS + C
Sbjct: 36 IYKYDVRFKQPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGC 82


>sp|Q720D3|LUXS_LISMF S-ribosylhomocysteine lyase OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=luxS PE=3
SV=1
Length = 155

Score = 32.7 bits (73), Expect = 1.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2

Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45
I+K+D + NK M L + HL+ E+A NHT +L IS + C
Sbjct: 36 IYKYDVRFKQPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGC 82


>sp|Q92C64|LUXS_LISIN S-ribosylhomocysteine lyase OS=Listeria
innocua GN=luxS PE=3 SV=1
Length = 155

Score = 32.7 bits (73), Expect = 1.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2

Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45
I+K+D + NK M L + HL+ E+A NHT +L IS + C
Sbjct: 36 IYKYDVRFKQPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGC 82


>sp|Q12108|YO118_YEAST Uncharacterized protein YOR118W
OS=Saccharomyces cerevisiae GN=YOR118W PE=1 SV=1
Length = 567

Score = 32.0 bits (71), Expect = 1.8
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -1

Query: 501 DVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFG 385
DVEVWG GG +E+Q + ++ ++R++++L+S G
Sbjct: 508 DVEVWGCGGEKELEEQIKQLEWEEAESKRRQQINLRSLG 546


>sp|P0C548|PLPL2_RAT Patatin-like phospholipase domain-containing
protein 2 OS=Rattus norvegicus GN=Pnpla2 PE=2 SV=1
Length = 478

Score = 30.4 bits (67), Expect = 5.0
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2

Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487
+TI++ FSGESD P D + LR+ +T+ F N S PP+P
Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRITNTSIQFNLRNLYRLSKALFPPEP 231


>sp|O52164|DNAJ2_STRAL Chaperone protein dnaJ 2 OS=Streptomyces
albus G GN=dnaJ2 PE=3 SV=1
Length = 379

Score = 30.4 bits (67), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3

Query: 315 PAVDLYLDLIPYPSSSFQANLTNCRMTASQPCVSAPQTNPSCLETV 452
P DLY+++ P S FQ + T + P + P CLET+
Sbjct: 243 PGGDLYVEIHELPHSVFQRRGDDLHCTVTIPMTGPRPSAPRCLETL 288


>sp|Q8BJ56|PLPL2_MOUSE Patatin-like phospholipase domain-containing
protein 2 OS=Mus musculus GN=Pnpla2 PE=1 SV=1
Length = 486

Score = 30.0 bits (66), Expect = 6.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2

Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487
+TI++ FSGESD P D + LR+ +T+ F N S PP+P
Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEP 231


>sp|Q96AD5|PLPL2_HUMAN Patatin-like phospholipase domain-containing
protein 2 OS=Homo sapiens GN=PNPLA2 PE=1 SV=1
Length = 504

Score = 30.0 bits (66), Expect = 6.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2

Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487
+TI++ FSGESD P D + LR+ +T+ F N S PP+P
Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEP 231


>sp|Q2KI18|PLPL2_BOVIN Patatin-like phospholipase domain-containing
protein 2 OS=Bos taurus GN=PNPLA2 PE=2 SV=1
Length = 486

Score = 30.0 bits (66), Expect = 6.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2

Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487
+TI++ FSGESD P D + LR+ +T+ F N S PP+P
Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEP 231


tr_hit_id Q7XM12
Definition tr|Q7XM12|Q7XM12_ORYSJ Os04g0663700 protein OS=Oryza sativa subsp. japonica
Align length 66
Score (bit) 100.0
E-value 4.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921093|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_E04.
(513 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XM12|Q7XM12_ORYSJ Os04g0663700 protein OS=Oryza sativa subs... 100 4e-20
tr|Q01K29|Q01K29_ORYSA OSIGBa0099L20.7 protein OS=Oryza sativa G... 100 4e-20
tr|B8AVY8|B8AVY8_ORYSI Putative uncharacterized protein OS=Oryza... 100 4e-20
tr|A3AYC2|A3AYC2_ORYSJ Putative uncharacterized protein OS=Oryza... 100 4e-20
tr|A7NSY6|A7NSY6_VITVI Chromosome chr18 scaffold_1, whole genome... 96 8e-19
tr|B4FYC9|B4FYC9_MAIZE Putative uncharacterized protein OS=Zea m... 96 1e-18
tr|B4FL26|B4FL26_MAIZE Putative uncharacterized protein OS=Zea m... 96 1e-18
tr|A9TAL3|A9TAL3_PHYPA Predicted protein (Fragment) OS=Physcomit... 91 3e-17
tr|Q8GT91|Q8GT91_PRUPE Putative uncharacterized protein OS=Prunu... 90 7e-17
tr|Q9FKA3|Q9FKA3_ARATH Genomic DNA, chromosome 5, P1 clone:MIJ24... 85 2e-15
tr|Q94AW2|Q94AW2_ARATH AT5g39590/MIJ24_60 OS=Arabidopsis thalian... 85 2e-15
tr|A9TM81|A9TM81_PHYPA Predicted protein (Fragment) OS=Physcomit... 85 2e-15
tr|A8XLQ5|A8XLQ5_CAEBR Putative uncharacterized protein OS=Caeno... 47 6e-04
tr|Q965X3|Q965X3_CAEEL Putative uncharacterized protein Y39A3CL.... 47 7e-04
tr|Q965X2|Q965X2_CAEEL Putative uncharacterized protein Y39A3CL.... 47 7e-04
tr|B6N9S0|B6N9S0_BRAFL Putative uncharacterized protein OS=Branc... 42 0.023
tr|A7RPK5|A7RPK5_NEMVE Predicted protein OS=Nematostella vectens... 39 0.15
tr|A7NYA5|A7NYA5_VITVI Chromosome chr6 scaffold_3, whole genome ... 39 0.20
tr|A9UQ32|A9UQ32_MONBE Predicted protein OS=Monosiga brevicollis... 37 0.44
tr|Q1JSJ0|Q1JSJ0_TOXGO Putative uncharacterized protein OS=Toxop... 36 0.98
tr|B6KPC1|B6KPC1_TOXGO TLD domain-containing protein OS=Toxoplas... 36 0.98
tr|Q6CMD3|Q6CMD3_KLULA KLLA0E21143p OS=Kluyveromyces lactis GN=K... 36 0.98
tr|A5APB2|A5APB2_VITVI Putative uncharacterized protein OS=Vitis... 36 1.3
tr|Q5CUI2|Q5CUI2_CRYPV T1Dc domain containing protein OS=Cryptos... 35 1.7
tr|Q5CI64|Q5CI64_CRYHO Krox-like protein OS=Cryptosporidium homi... 35 1.7
tr|B4HWB8|B4HWB8_DROSE GM12192 OS=Drosophila sechellia GN=GM1219... 35 2.2
tr|B0WMK8|B0WMK8_CULQU Putative uncharacterized protein OS=Culex... 34 3.7
tr|Q1HQN0|Q1HQN0_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.9
tr|Q0IEJ0|Q0IEJ0_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.9

>tr|Q7XM12|Q7XM12_ORYSJ Os04g0663700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0084K01.19 PE=4 SV=2
Length = 536

Score = 100 bits (249), Expect = 4e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN
Sbjct: 471 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 530

Query: 327 GQRQDR 310
+R+DR
Sbjct: 531 VRREDR 536


>tr|Q01K29|Q01K29_ORYSA OSIGBa0099L20.7 protein OS=Oryza sativa
GN=OSIGBa0099L20.7 PE=4 SV=1
Length = 536

Score = 100 bits (249), Expect = 4e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN
Sbjct: 471 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 530

Query: 327 GQRQDR 310
+R+DR
Sbjct: 531 VRREDR 536


>tr|B8AVY8|B8AVY8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_17800 PE=4 SV=1
Length = 536

Score = 100 bits (249), Expect = 4e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN
Sbjct: 471 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 530

Query: 327 GQRQDR 310
+R+DR
Sbjct: 531 VRREDR 536


>tr|A3AYC2|A3AYC2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_015794 PE=4 SV=1
Length = 550

Score = 100 bits (249), Expect = 4e-20
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN
Sbjct: 485 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 544

Query: 327 GQRQDR 310
+R+DR
Sbjct: 545 VRREDR 550


>tr|A7NSY6|A7NSY6_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00014462001
PE=4 SV=1
Length = 537

Score = 96.3 bits (238), Expect = 8e-19
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -1

Query: 510 KVIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPN 331
+V+DVEVWG GG E Q FQ R+ LF EQRRKVDL++F +W DSPEKMMMD++SDPN
Sbjct: 471 RVLDVEVWGLGGRTAREVQISFQKREQLFTEQRRKVDLKTFASWDDSPEKMMMDVMSDPN 530

Query: 330 RGQRQDR 310
R R+DR
Sbjct: 531 RVNREDR 537


>tr|B4FYC9|B4FYC9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 135

Score = 95.5 bits (236), Expect = 1e-18
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++F +W DSPEKMMMDM+SDPN
Sbjct: 70 VLDVEVWGLGGEATKRQQNMYKKREDIFSEQRRKVDLKTFASWEDSPEKMMMDMMSDPNT 129

Query: 327 GQRQDR 310
+R+DR
Sbjct: 130 VRREDR 135


>tr|B4FL26|B4FL26_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 544

Score = 95.5 bits (236), Expect = 1e-18
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++F +W DSPEKMMMDM+SDPN
Sbjct: 479 VLDVEVWGLGGEATKRQQNMYKKREDIFSEQRRKVDLKTFASWEDSPEKMMMDMMSDPNT 538

Query: 327 GQRQDR 310
+R+DR
Sbjct: 539 VRREDR 544


>tr|A9TAL3|A9TAL3_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_142607 PE=4 SV=1
Length = 435

Score = 91.3 bits (225), Expect = 3e-17
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = -1

Query: 513 GKVIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDP 334
G+V VEVWG GG + E+QA +Q R++LF EQRRKVDL++FGNW DSP+ MMD++SDP
Sbjct: 368 GRVSKVEVWGLGGFSADEQQAVYQHRENLFSEQRRKVDLKNFGNWKDSPDAAMMDLMSDP 427

Query: 333 NRGQRQDR 310
N+ R++R
Sbjct: 428 NKAAREER 435


>tr|Q8GT91|Q8GT91_PRUPE Putative uncharacterized protein OS=Prunus
persica PE=4 SV=1
Length = 539

Score = 89.7 bits (221), Expect = 7e-17
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
+ +VEVWG GG + + Q ++ R+ LF +QRRKVDL++F NW DSPEKMMMDMVSDPN
Sbjct: 474 ISEVEVWGLGGRSAKDVQDSYKKREQLFTDQRRKVDLKTFANWEDSPEKMMMDMVSDPNA 533

Query: 327 GQRQDR 310
+R+DR
Sbjct: 534 VRREDR 539


>tr|Q9FKA3|Q9FKA3_ARATH Genomic DNA, chromosome 5, P1 clone:MIJ24
OS=Arabidopsis thaliana GN=At5g39590 PE=4 SV=1
Length = 542

Score = 85.1 bits (209), Expect = 2e-15
Identities = 35/66 (53%), Positives = 50/66 (75%)
Frame = -1

Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328
V+D+E WG GG E Q ++Q R++LF QRRK+DL++F NW DSPEKMMMDM+ +PN
Sbjct: 477 VLDIEAWGLGGNKAREIQQKYQKREELFTNQRRKIDLKTFTNWEDSPEKMMMDMMGNPNA 536

Query: 327 GQRQDR 310
++++R
Sbjct: 537 PRKEER 542