BP921093 |
Clone id |
YMU001_000145_E04 |
Library |
YMU01 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000145_E04. |
Accession |
BP921093 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1972Contig1 |
Sequence |
CAGCAAAAGAATATCTATAACACGATTTACAAAATAGTCCTTGTACAGGATATAGCACTT ATACCATGAAGCCGTGTATGGTTTGAAGCCATCTCCATGAGCAAATGTGTACTTGCACAC AATGTCAGCATGTTATACTGACGTTTATTGACATATCTGCCTGGAGCATCATGCTTCCAG ATGAGCAGTGATCCAAACAAAGAAATCCCAAATCACGAAAGCTCACATTTCAAGGAGCGG CAGTCAGAACAGAACTTCTTTCAGCCTCCAATTGCTTTGCAAGCATTTAAAACCGTCATA ACTGTGTCATCGATCCTGCCGTTGACCTCTATTTGGATCTGATACCATATCCATCATCAT CTTTTCAGGCGAATCTGACCAATTGCCGAATGACTGCAAGTCAACCTTGCGTCTCTGCTC CACAAACAAATCCTTCCTGCCTTGAAACTGTGCTTGCTTTTCCATGGTCGCTGCCCCTCC GAAGCCCCATACCTCCACATCTATCACTTTCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A0AI91 |
Definition |
sp|A0AI91|LUXS_LISW6 S-ribosylhomocysteine lyase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) |
Align length |
47 |
Score (bit) |
33.1 |
E-value |
0.77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921093|Adiantum capillus-veneris mRNA, clone: YMU001_000145_E04. (513 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|A0AI91|LUXS_LISW6 S-ribosylhomocysteine lyase OS=Listeria wel... 33 0.77 sp|Q8Y7I9|LUXS_LISMO S-ribosylhomocysteine lyase OS=Listeria mon... 33 1.0 sp|Q720D3|LUXS_LISMF S-ribosylhomocysteine lyase OS=Listeria mon... 33 1.0 sp|Q92C64|LUXS_LISIN S-ribosylhomocysteine lyase OS=Listeria inn... 33 1.0 sp|Q12108|YO118_YEAST Uncharacterized protein YOR118W OS=Sacchar... 32 1.8 sp|P0C548|PLPL2_RAT Patatin-like phospholipase domain-containing... 30 5.0 sp|O52164|DNAJ2_STRAL Chaperone protein dnaJ 2 OS=Streptomyces a... 30 5.0 sp|Q8BJ56|PLPL2_MOUSE Patatin-like phospholipase domain-containi... 30 6.5 sp|Q96AD5|PLPL2_HUMAN Patatin-like phospholipase domain-containi... 30 6.5 sp|Q2KI18|PLPL2_BOVIN Patatin-like phospholipase domain-containi... 30 6.5
>sp|A0AI91|LUXS_LISW6 S-ribosylhomocysteine lyase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=luxS PE=3 SV=1 Length = 155
Score = 33.1 bits (74), Expect = 0.77 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = -2
Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45 I+K+D + NK +M L + HL+ E+A NHT +L IS + C Sbjct: 36 IYKYDVRFKQPNKEHMDMPALHSLEHLMAELARNHTDKLVDISPMGC 82
>sp|Q8Y7I9|LUXS_LISMO S-ribosylhomocysteine lyase OS=Listeria monocytogenes GN=luxS PE=3 SV=1 Length = 155
Score = 32.7 bits (73), Expect = 1.0 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -2
Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45 I+K+D + NK M L + HL+ E+A NHT +L IS + C Sbjct: 36 IYKYDVRFKQPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGC 82
>sp|Q720D3|LUXS_LISMF S-ribosylhomocysteine lyase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=luxS PE=3 SV=1 Length = 155
Score = 32.7 bits (73), Expect = 1.0 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -2
Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45 I+K+D + NK M L + HL+ E+A NHT +L IS + C Sbjct: 36 IYKYDVRFKQPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGC 82
>sp|Q92C64|LUXS_LISIN S-ribosylhomocysteine lyase OS=Listeria innocua GN=luxS PE=3 SV=1 Length = 155
Score = 32.7 bits (73), Expect = 1.0 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -2
Query: 182 IWKHDAPGRYVNKRQYNMLTLCASTHLLMEMASNHT-RLHGISAISC 45 I+K+D + NK M L + HL+ E+A NHT +L IS + C Sbjct: 36 IYKYDVRFKQPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGC 82
>sp|Q12108|YO118_YEAST Uncharacterized protein YOR118W OS=Saccharomyces cerevisiae GN=YOR118W PE=1 SV=1 Length = 567
Score = 32.0 bits (71), Expect = 1.8 Identities = 14/39 (35%), Positives = 26/39 (66%) Frame = -1
Query: 501 DVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFG 385 DVEVWG GG +E+Q + ++ ++R++++L+S G Sbjct: 508 DVEVWGCGGEKELEEQIKQLEWEEAESKRRQQINLRSLG 546
>sp|P0C548|PLPL2_RAT Patatin-like phospholipase domain-containing protein 2 OS=Rattus norvegicus GN=Pnpla2 PE=2 SV=1 Length = 478
Score = 30.4 bits (67), Expect = 5.0 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = +2
Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487 +TI++ FSGESD P D + LR+ +T+ F N S PP+P Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRITNTSIQFNLRNLYRLSKALFPPEP 231
>sp|O52164|DNAJ2_STRAL Chaperone protein dnaJ 2 OS=Streptomyces albus G GN=dnaJ2 PE=3 SV=1 Length = 379
Score = 30.4 bits (67), Expect = 5.0 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +3
Query: 315 PAVDLYLDLIPYPSSSFQANLTNCRMTASQPCVSAPQTNPSCLETV 452 P DLY+++ P S FQ + T + P + P CLET+ Sbjct: 243 PGGDLYVEIHELPHSVFQRRGDDLHCTVTIPMTGPRPSAPRCLETL 288
>sp|Q8BJ56|PLPL2_MOUSE Patatin-like phospholipase domain-containing protein 2 OS=Mus musculus GN=Pnpla2 PE=1 SV=1 Length = 486
Score = 30.0 bits (66), Expect = 6.5 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = +2
Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487 +TI++ FSGESD P D + LR+ +T+ F N S PP+P Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEP 231
>sp|Q96AD5|PLPL2_HUMAN Patatin-like phospholipase domain-containing protein 2 OS=Homo sapiens GN=PNPLA2 PE=1 SV=1 Length = 504
Score = 30.0 bits (66), Expect = 6.5 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = +2
Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487 +TI++ FSGESD P D + LR+ +T+ F N S PP+P Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEP 231
>sp|Q2KI18|PLPL2_BOVIN Patatin-like phospholipase domain-containing protein 2 OS=Bos taurus GN=PNPLA2 PE=2 SV=1 Length = 486
Score = 30.0 bits (66), Expect = 6.5 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = +2
Query: 341 DTISIIIFSGESDQLPNDCKST---LRLCSTNKSFLP*NCACFSMVAAPPKP 487 +TI++ FSGESD P D + LR+ +T+ F N S PP+P Sbjct: 180 NTITVSPFSGESDICPQDSSTNIHELRVTNTSIQFNLRNLYRLSKALFPPEP 231
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XM12 |
Definition |
tr|Q7XM12|Q7XM12_ORYSJ Os04g0663700 protein OS=Oryza sativa subsp. japonica |
Align length |
66 |
Score (bit) |
100.0 |
E-value |
4.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921093|Adiantum capillus-veneris mRNA, clone: YMU001_000145_E04. (513 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XM12|Q7XM12_ORYSJ Os04g0663700 protein OS=Oryza sativa subs... 100 4e-20 tr|Q01K29|Q01K29_ORYSA OSIGBa0099L20.7 protein OS=Oryza sativa G... 100 4e-20 tr|B8AVY8|B8AVY8_ORYSI Putative uncharacterized protein OS=Oryza... 100 4e-20 tr|A3AYC2|A3AYC2_ORYSJ Putative uncharacterized protein OS=Oryza... 100 4e-20 tr|A7NSY6|A7NSY6_VITVI Chromosome chr18 scaffold_1, whole genome... 96 8e-19 tr|B4FYC9|B4FYC9_MAIZE Putative uncharacterized protein OS=Zea m... 96 1e-18 tr|B4FL26|B4FL26_MAIZE Putative uncharacterized protein OS=Zea m... 96 1e-18 tr|A9TAL3|A9TAL3_PHYPA Predicted protein (Fragment) OS=Physcomit... 91 3e-17 tr|Q8GT91|Q8GT91_PRUPE Putative uncharacterized protein OS=Prunu... 90 7e-17 tr|Q9FKA3|Q9FKA3_ARATH Genomic DNA, chromosome 5, P1 clone:MIJ24... 85 2e-15 tr|Q94AW2|Q94AW2_ARATH AT5g39590/MIJ24_60 OS=Arabidopsis thalian... 85 2e-15 tr|A9TM81|A9TM81_PHYPA Predicted protein (Fragment) OS=Physcomit... 85 2e-15 tr|A8XLQ5|A8XLQ5_CAEBR Putative uncharacterized protein OS=Caeno... 47 6e-04 tr|Q965X3|Q965X3_CAEEL Putative uncharacterized protein Y39A3CL.... 47 7e-04 tr|Q965X2|Q965X2_CAEEL Putative uncharacterized protein Y39A3CL.... 47 7e-04 tr|B6N9S0|B6N9S0_BRAFL Putative uncharacterized protein OS=Branc... 42 0.023 tr|A7RPK5|A7RPK5_NEMVE Predicted protein OS=Nematostella vectens... 39 0.15 tr|A7NYA5|A7NYA5_VITVI Chromosome chr6 scaffold_3, whole genome ... 39 0.20 tr|A9UQ32|A9UQ32_MONBE Predicted protein OS=Monosiga brevicollis... 37 0.44 tr|Q1JSJ0|Q1JSJ0_TOXGO Putative uncharacterized protein OS=Toxop... 36 0.98 tr|B6KPC1|B6KPC1_TOXGO TLD domain-containing protein OS=Toxoplas... 36 0.98 tr|Q6CMD3|Q6CMD3_KLULA KLLA0E21143p OS=Kluyveromyces lactis GN=K... 36 0.98 tr|A5APB2|A5APB2_VITVI Putative uncharacterized protein OS=Vitis... 36 1.3 tr|Q5CUI2|Q5CUI2_CRYPV T1Dc domain containing protein OS=Cryptos... 35 1.7 tr|Q5CI64|Q5CI64_CRYHO Krox-like protein OS=Cryptosporidium homi... 35 1.7 tr|B4HWB8|B4HWB8_DROSE GM12192 OS=Drosophila sechellia GN=GM1219... 35 2.2 tr|B0WMK8|B0WMK8_CULQU Putative uncharacterized protein OS=Culex... 34 3.7 tr|Q1HQN0|Q1HQN0_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.9 tr|Q0IEJ0|Q0IEJ0_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.9
>tr|Q7XM12|Q7XM12_ORYSJ Os04g0663700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0084K01.19 PE=4 SV=2 Length = 536
Score = 100 bits (249), Expect = 4e-20 Identities = 44/66 (66%), Positives = 55/66 (83%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN Sbjct: 471 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 530
Query: 327 GQRQDR 310 +R+DR Sbjct: 531 VRREDR 536
>tr|Q01K29|Q01K29_ORYSA OSIGBa0099L20.7 protein OS=Oryza sativa GN=OSIGBa0099L20.7 PE=4 SV=1 Length = 536
Score = 100 bits (249), Expect = 4e-20 Identities = 44/66 (66%), Positives = 55/66 (83%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN Sbjct: 471 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 530
Query: 327 GQRQDR 310 +R+DR Sbjct: 531 VRREDR 536
>tr|B8AVY8|B8AVY8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17800 PE=4 SV=1 Length = 536
Score = 100 bits (249), Expect = 4e-20 Identities = 44/66 (66%), Positives = 55/66 (83%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN Sbjct: 471 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 530
Query: 327 GQRQDR 310 +R+DR Sbjct: 531 VRREDR 536
>tr|A3AYC2|A3AYC2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015794 PE=4 SV=1 Length = 550
Score = 100 bits (249), Expect = 4e-20 Identities = 44/66 (66%), Positives = 55/66 (83%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++FGNW DSPEKMMMDM+SDPN Sbjct: 485 VLDVEVWGLGGEATRRQQDMYKKREDIFSEQRRKVDLKTFGNWEDSPEKMMMDMISDPNA 544
Query: 327 GQRQDR 310 +R+DR Sbjct: 545 VRREDR 550
>tr|A7NSY6|A7NSY6_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014462001 PE=4 SV=1 Length = 537
Score = 96.3 bits (238), Expect = 8e-19 Identities = 43/67 (64%), Positives = 52/67 (77%) Frame = -1
Query: 510 KVIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPN 331 +V+DVEVWG GG E Q FQ R+ LF EQRRKVDL++F +W DSPEKMMMD++SDPN Sbjct: 471 RVLDVEVWGLGGRTAREVQISFQKREQLFTEQRRKVDLKTFASWDDSPEKMMMDVMSDPN 530
Query: 330 RGQRQDR 310 R R+DR Sbjct: 531 RVNREDR 537
>tr|B4FYC9|B4FYC9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 135
Score = 95.5 bits (236), Expect = 1e-18 Identities = 42/66 (63%), Positives = 54/66 (81%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++F +W DSPEKMMMDM+SDPN Sbjct: 70 VLDVEVWGLGGEATKRQQNMYKKREDIFSEQRRKVDLKTFASWEDSPEKMMMDMMSDPNT 129
Query: 327 GQRQDR 310 +R+DR Sbjct: 130 VRREDR 135
>tr|B4FL26|B4FL26_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 544
Score = 95.5 bits (236), Expect = 1e-18 Identities = 42/66 (63%), Positives = 54/66 (81%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 V+DVEVWG GG AT +Q ++ R+D+F EQRRKVDL++F +W DSPEKMMMDM+SDPN Sbjct: 479 VLDVEVWGLGGEATKRQQNMYKKREDIFSEQRRKVDLKTFASWEDSPEKMMMDMMSDPNT 538
Query: 327 GQRQDR 310 +R+DR Sbjct: 539 VRREDR 544
>tr|A9TAL3|A9TAL3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142607 PE=4 SV=1 Length = 435
Score = 91.3 bits (225), Expect = 3e-17 Identities = 40/68 (58%), Positives = 54/68 (79%) Frame = -1
Query: 513 GKVIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDP 334 G+V VEVWG GG + E+QA +Q R++LF EQRRKVDL++FGNW DSP+ MMD++SDP Sbjct: 368 GRVSKVEVWGLGGFSADEQQAVYQHRENLFSEQRRKVDLKNFGNWKDSPDAAMMDLMSDP 427
Query: 333 NRGQRQDR 310 N+ R++R Sbjct: 428 NKAAREER 435
>tr|Q8GT91|Q8GT91_PRUPE Putative uncharacterized protein OS=Prunus persica PE=4 SV=1 Length = 539
Score = 89.7 bits (221), Expect = 7e-17 Identities = 39/66 (59%), Positives = 51/66 (77%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 + +VEVWG GG + + Q ++ R+ LF +QRRKVDL++F NW DSPEKMMMDMVSDPN Sbjct: 474 ISEVEVWGLGGRSAKDVQDSYKKREQLFTDQRRKVDLKTFANWEDSPEKMMMDMVSDPNA 533
Query: 327 GQRQDR 310 +R+DR Sbjct: 534 VRREDR 539
>tr|Q9FKA3|Q9FKA3_ARATH Genomic DNA, chromosome 5, P1 clone:MIJ24 OS=Arabidopsis thaliana GN=At5g39590 PE=4 SV=1 Length = 542
Score = 85.1 bits (209), Expect = 2e-15 Identities = 35/66 (53%), Positives = 50/66 (75%) Frame = -1
Query: 507 VIDVEVWGFGGAATMEKQAQFQGRKDLFVEQRRKVDLQSFGNWSDSPEKMMMDMVSDPNR 328 V+D+E WG GG E Q ++Q R++LF QRRK+DL++F NW DSPEKMMMDM+ +PN Sbjct: 477 VLDIEAWGLGGNKAREIQQKYQKREELFTNQRRKIDLKTFTNWEDSPEKMMMDMMGNPNA 536
Query: 327 GQRQDR 310 ++++R Sbjct: 537 PRKEER 542
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