| BP921098 |
| Clone id |
YMU001_000145_E12 |
| Library |
YMU01 |
| Length |
589 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000145_E12. |
| Accession |
BP921098 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CAGGTACTCCAGAAAAAGGAGGGCTAATAGGCCTGTAGGCATTACATCAGCCCGTAGGCA
ACAACACATATAAATGGAACTGAGAGTGAAAAAAACCCCTGAAATATAACCATTACAACA
AACCATAGGGAAAAAACCACTAGTGATACAAAGTTTACAAAAGATGGGTGATACGTCAAA
AACTGTGGACAGAGGTGGTAGGGAAAATTATATCGGAGAGCTGAAGCAGAAATAGGCCAT
CCACACTTTGACGAGGAGGCCGAAAACCCCACCAAAGAATCTCCAATATTAGACTTTGGA
TCTCTCAGGCCCACCCCAACAGAATAAGCATCACCATTGCACAAATACTTTTGCACCAAA
CTTGGGAGAGAAAACCTCAAGCCATCCTTGATGTCAATCAACATGGCTATGATGCTCTTC
TAACTTGCAAACAAACAAGCCGAAGATGTGGCTTAACCCATCACGGCCTCCACACGTGCC
TAAACCACCCACCTATCCCATCCACCCAACTGGTGTCCAGCAAACTAGAGAACTAAACAA
AACAACAGGCAATAGCAAACGAAGCATGCTAATCATGCGCACACACCCC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q801X6 |
| Definition |
sp|Q801X6|PHAR1_CHICK Phosphatase and actin regulator 1 OS=Gallus gallus |
| Align length |
96 |
| Score (bit) |
34.3 |
| E-value |
0.48 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921098|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_E12.
(589 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q801X6|PHAR1_CHICK Phosphatase and actin regulator 1 OS=Gallu... 34 0.48
sp|Q27409|FP1_MYTGA Adhesive plaque matrix protein OS=Mytilus ga... 33 1.4
sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapi... 33 1.4
sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norv... 32 1.8
sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing prot... 32 2.4
sp|Q8AW93|DTX1_XENLA Protein deltex-1 OS=Xenopus laevis GN=dtx1 ... 32 3.1
sp|Q80ZF8|BAI3_MOUSE Brain-specific angiogenesis inhibitor 3 OS=... 31 4.0
sp|O60242|BAI3_HUMAN Brain-specific angiogenesis inhibitor 3 OS=... 31 4.0
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 31 4.0
sp|Q14686|NCOA6_HUMAN Nuclear receptor coactivator 6 OS=Homo sap... 31 4.0
sp|Q6W4X9|MUC6_HUMAN Mucin-6 OS=Homo sapiens GN=MUC6 PE=1 SV=2 31 5.3
sp|A1D9I5|TOF1_NEOFI Topoisomerase 1-associated factor 1 OS=Neos... 30 6.8
sp|Q4W9M7|TOF1_ASPFU Topoisomerase 1-associated factor 1 OS=Aspe... 30 6.8
sp|Q9IA19|HXA1_HETFR Homeobox protein Hox-A1 OS=Heterodontus fra... 30 6.9
sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS... 30 6.9
sp|P58994|GSH1_BUCAP Glutamate--cysteine ligase OS=Buchnera aphi... 30 8.9
sp|O65472|CRK12_ARATH Putative cysteine-rich receptor-like prote... 30 9.0
>sp|Q801X6|PHAR1_CHICK Phosphatase and actin regulator 1 OS=Gallus
gallus GN=PHACTR1 PE=2 SV=1
Length = 501
Score = 34.3 bits (77), Expect = 0.48
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +2
Query: 260 PKTPPKNLQY*TLDLSGPPQQNKHHHCTNTFAPNLGEKTSSHP*CQSTWL*CSSNLQTNK 439
P PPK + + L GP + + T +K+S P Q S L ++
Sbjct: 168 PPLPPKKVMI-CMPLGGPDLSSLSSYST--------QKSSQQPLTQHHHTVLPSQLAAHQ 218
Query: 440 PKMWLNPSRPPHVPK-PPTYPIHPTGVQQTRELNKT 544
++ S H+P T PIHP+G + ELNKT
Sbjct: 219 HQLQYG-SHSQHLPSGSSTLPIHPSGCRMIEELNKT 253
>sp|Q27409|FP1_MYTGA Adhesive plaque matrix protein OS=Mytilus
galloprovincialis GN=FP1 PE=2 SV=1
Length = 751
Score = 32.7 bits (73), Expect = 1.4
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Frame = +2
Query: 332 HHCTNTFAPNLGEKTSSHP*CQSTW----L*CSSNLQTN-----KPKMWLNPSRPPHVPK 484
+H TN++ P G KT+ P + + + N +TN KPKM P+ P
Sbjct: 66 YHPTNSYPPTYGSKTNYLPLAKKLSSYKPIKTTYNAKTNYPPVYKPKMTYPPTYKPKPSY 125
Query: 485 PPTYPIHPT 511
PPTY P+
Sbjct: 126 PPTYKPKPS 134
>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens
GN=DNAH7 PE=1 SV=1
Length = 4024
Score = 32.7 bits (73), Expect = 1.4
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 440 PKMWLNPSRPPHVPKPPTY--PIHPTGVQQTRELNKTTGNSKRSMLIM 577
P MWL P + +PK P+Y P++ T + R + TTG+S ++ M
Sbjct: 3955 PVMWLKPCKRADIPKRPSYVAPLYKT--SERRGVLSTTGHSTNFVIAM 4000
>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus
norvegicus GN=Dnah7 PE=2 SV=2
Length = 4057
Score = 32.3 bits (72), Expect = 1.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 440 PKMWLNPSRPPHVPKPPTY--PIHPTGVQQTRELNKTTGNSKRSMLIM 577
P MWL P + +PK P+Y P++ T + R TTG+S ++ M
Sbjct: 3988 PVMWLKPCKKSDIPKRPSYVAPLYKT--SERRGTLSTTGHSTNFVIAM 4033
>sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein
1A OS=Homo sapiens GN=ARID1A PE=1 SV=3
Length = 2285
Score = 32.0 bits (71), Expect = 2.4
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +2
Query: 311 PPQQNKHHHCTNTFAPNLGEKTSSHP*CQSTWL*CSSNLQTNKPKMWLNPSRPPHVPKPP 490
PP Q H P+ ++ S P LQ+++P PS+PPH P
Sbjct: 489 PPSQTPHAQ------PSYQQQPQSQP----------PQLQSSQPPYSQQPSQPPHQQSPA 532
Query: 491 TYPIHPTGVQQ 523
YP + QQ
Sbjct: 533 PYPSQQSTTQQ 543
>sp|Q8AW93|DTX1_XENLA Protein deltex-1 OS=Xenopus laevis GN=dtx1
PE=2 SV=1
Length = 623
Score = 31.6 bits (70), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 467 PPHVPKPPTYPIHPTGVQQT 526
PP +P PP PIHP+G++Q+
Sbjct: 230 PPALPPPPPPPIHPSGLRQS 249
>sp|Q80ZF8|BAI3_MOUSE Brain-specific angiogenesis inhibitor 3 OS=Mus
musculus GN=Bai3 PE=1 SV=1
Length = 1522
Score = 31.2 bits (69), Expect = 4.0
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 288 IRLWISQAHPNRISITIAQILLHQTWERKPQAILDVNQHGYDALLTCKQTSRRCGLTHHG 467
+R Q P I L+ W+R P L NQ +A T TSRRC L+ HG
Sbjct: 499 VRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLNATGT---TSRRCSLSLHG 555
Query: 468 L 470
+
Sbjct: 556 V 556
>sp|O60242|BAI3_HUMAN Brain-specific angiogenesis inhibitor 3
OS=Homo sapiens GN=BAI3 PE=1 SV=1
Length = 1522
Score = 31.2 bits (69), Expect = 4.0
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 288 IRLWISQAHPNRISITIAQILLHQTWERKPQAILDVNQHGYDALLTCKQTSRRCGLTHHG 467
+R Q P I L+ W+R P L NQ +A T TSRRC L+ HG
Sbjct: 499 VRRCSEQRCPAPYEICPEDYLMSMVWKRTPAGDLAFNQCPLNATGT---TSRRCSLSLHG 555
Query: 468 L 470
+
Sbjct: 556 V 556
>sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1
OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2
Length = 672
Score = 31.2 bits (69), Expect = 4.0
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
Frame = +2
Query: 422 NLQ-TNKPKMWLNPSRPPHVPKPPTYPIHPTGVQQTRELNK--------------TTGNS 556
NLQ +N P M + + PH P+Y +HPTG Q + N GNS
Sbjct: 530 NLQRSNVPYMQEDGALYPHQYSSPSYSLHPTGNQFSNATNNLPQFGNAMSISMQLPNGNS 589
Query: 557 KRSMLIMRTHP 589
++ M T+P
Sbjct: 590 NKTASSMNTNP 600
>sp|Q14686|NCOA6_HUMAN Nuclear receptor coactivator 6 OS=Homo sapiens
GN=NCOA6 PE=1 SV=3
Length = 2063
Score = 31.2 bits (69), Expect = 4.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = +2
Query: 422 NLQTNKPKMWLNPSRPPHVPKP-----PTYPIHPTGVQQTRELN 538
N+QT +P + + + P +P P P P HP VQQ +ELN
Sbjct: 1725 NIQTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPP-VQQVKELN 1767
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B6LZB7 |
| Definition |
tr|B6LZB7|B6LZB7_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae |
| Align length |
137 |
| Score (bit) |
37.7 |
| E-value |
0.49 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921098|Adiantum capillus-veneris mRNA, clone:
YMU001_000145_E12.
(589 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B6LZB7|B6LZB7_BRAFL Putative uncharacterized protein OS=Branc... 38 0.49
tr|Q40336|Q40336_MEDSA Proline-rich cell wall protein OS=Medicag... 30 0.95
tr|B6KU42|B6KU42_TOXGO Putative uncharacterized protein OS=Toxop... 37 1.1
tr|Q0CDU2|Q0CDU2_ASPTN Putative uncharacterized protein OS=Asper... 37 1.1
tr|B4GU97|B4GU97_DROPE GL24965 OS=Drosophila persimilis GN=GL249... 36 1.4
tr|A9DMH3|A9DMH3_9FLAO Putative uncharacterized protein OS=Kordi... 35 3.2
tr|Q16Y31|Q16Y31_AEDAE Grb2-associated binder, gab OS=Aedes aegy... 35 3.2
tr|B6KW79|B6KW79_TOXGO Putative uncharacterized protein OS=Toxop... 35 4.1
tr|B6HL03|B6HL03_PENCH Pc21g20530 protein OS=Penicillium chrysog... 35 4.1
tr|B3CLV6|B3CLV6_WOLPP Primosomal protein N OS=Wolbachia pipient... 34 5.3
tr|B6Y675|B6Y675_9RICK Primosomal protein N OS=Wolbachia endosym... 34 5.3
tr|B7PT56|B7PT56_IXOSC Monocarboxylate transporter, putative (Fr... 34 5.4
tr|O62424|O62424_CAEEL Protein Y38H8A.4, confirmed by transcript... 34 7.1
tr|A2QIH0|A2QIH0_ASPNC Similarity to hypothetical protein AAN103... 34 7.1
>tr|B6LZB7|B6LZB7_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_121306 PE=4 SV=1
Length = 573
Score = 37.7 bits (86), Expect = 0.49
Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 18/137 (13%)
Frame = +2
Query: 215 GELKQK*AIHTLTRRPKTPPKNLQY*TLDLSGPPQQNKHHHCTNTFAPNLGEKTSSHP*C 394
G L + A + + +P +PP Q T + PP HH P L S+H
Sbjct: 214 GHLGHQTAQISHSAKPASPPFRPQ--TAHTAHPPTHTAHHPTHTAHPPTLNSHPSTHKAY 271
Query: 395 QSTWL*CSSNLQTNKPKMWLNPSR------------PPHVPKPPTYPIHP----TGVQQT 526
T NL T+ P +P P HV PPT+ HP T + QT
Sbjct: 272 PPTLTSHPLNLTTHPPTRTAHPPSHVSHSPTHTPHPPIHVTHPPTHAAHPHTHKTPLPQT 331
Query: 527 RELNKTT--GNSKRSML 571
+ T N +R++L
Sbjct: 332 HTPHPPTRRRNGERTLL 348
>tr|Q40336|Q40336_MEDSA Proline-rich cell wall protein OS=Medicago
sativa PE=4 SV=1
Length = 381
Score = 29.6 bits (65), Expect(2) = 0.95
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 464 RPPHVPKPPTYPIHP 508
RPP+VPKPP P+ P
Sbjct: 172 RPPYVPKPPVVPVTP 186
Score = 25.4 bits (54), Expect(2) = 0.95
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 440 PKMWLNPSRPPHVPKPP 490
PK + P PP+VPKPP
Sbjct: 153 PKPPVVPVTPPYVPKPP 169
Score = 29.3 bits (64), Expect(2) = 1.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 467 PPHVPKPPTYPIHPTGVQ 520
PPHVP PP P+ P VQ
Sbjct: 231 PPHVPLPPVVPVTPPYVQ 248
Score = 25.4 bits (54), Expect(2) = 1.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 440 PKMWLNPSRPPHVPKPP 490
PK + P PP+VPKPP
Sbjct: 177 PKPPVVPVTPPYVPKPP 193
>tr|B6KU42|B6KU42_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_081360 PE=4 SV=1
Length = 261
Score = 36.6 bits (83), Expect = 1.1
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +2
Query: 302 LSGPPQQNKHHHCTNTFAPNLGEKTSSHP*CQSTWL*CSSNLQTNKPKMWLNPSRPPHVP 481
L PP + HHH + P+ E S S+ S+ ++ + P RPPH P
Sbjct: 102 LPKPPSYHNHHHHHHHHHPHSSESYSDSSSDSSS----DSSSDSSSDEANDRPPRPPHHP 157
Query: 482 KPPTYPIHP 508
+PP +P HP
Sbjct: 158 RPPHHP-HP 165
>tr|Q0CDU2|Q0CDU2_ASPTN Putative uncharacterized protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_08142
PE=4 SV=1
Length = 320
Score = 36.6 bits (83), Expect = 1.1
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 272 PKNLQY*T--LDLSGPPQQNKHHHCTNTFAPNLGEKTSSHP*CQSTWL*CSSNLQTNKPK 445
P+N Q T + +SGPP + HH TF NL + +S P P
Sbjct: 7 PRNRQLDTSGITISGPPPKTLHH-LNFTFTFNLQQPNTSIP-----------------PD 48
Query: 446 MWLNPSRPPHVPK-PPTYPIHPTGVQQT 526
+P++PP PK PP I PT + QT
Sbjct: 49 TMSSPAQPPPPPKSPPPTTIQPTQLAQT 76
>tr|B4GU97|B4GU97_DROPE GL24965 OS=Drosophila persimilis GN=GL24965
PE=4 SV=1
Length = 454
Score = 36.2 bits (82), Expect = 1.4
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 306 QAHPNRISITIAQILLHQTWERKPQAILDVNQHGYDALLTCKQTSRRCGLTHH--GLHTC 479
Q HP+ + + LH ++ + +LDVN Y+A LT +S + H LH
Sbjct: 112 QQHPH------SHLHLHPQQQQPRRLLLDVNSGSYNAGLTNTNSSDHLAVPRHAFSLHEP 165
Query: 480 LNHPPIPSTQLVSSKLEN 533
LNH STQ ++S N
Sbjct: 166 LNHSCYYSTQCLTSSTTN 183
>tr|A9DMH3|A9DMH3_9FLAO Putative uncharacterized protein OS=Kordia
algicida OT-1 GN=KAOT1_21127 PE=4 SV=1
Length = 175
Score = 35.0 bits (79), Expect = 3.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 395 QSTWL*CSSNLQTNKPKMWLNPSRPPHVPKP 487
Q WL S + K K W NPSRPP P+P
Sbjct: 127 QFDWLLEKSGWEIKKTKKWTNPSRPPIAPRP 157
>tr|Q16Y31|Q16Y31_AEDAE Grb2-associated binder, gab OS=Aedes aegypti
GN=AAEL008677 PE=4 SV=1
Length = 800
Score = 35.0 bits (79), Expect = 3.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 152 SLQKMGDTSKTVDRGGRENYIGELKQK*AIHTLTRRPKTPPKN---LQY*TLDLSGPPQQ 322
S+++ G + EN G ++ H P+TP KN LQY LD S PQ+
Sbjct: 670 SMRRKGGPISLTIQNHNENVYGNTQEHSIQHLTGISPRTPGKNDDRLQYLDLDHSSSPQK 729
Query: 323 NKHHH 337
+ HH
Sbjct: 730 SSSHH 734
>tr|B6KW79|B6KW79_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_034060 PE=4 SV=1
Length = 245
Score = 34.7 bits (78), Expect = 4.1
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 305 SGPPQQNKHHHCTNTFAPNLGEKTSSHP*CQSTWL*CSSNLQTNKPKMWLNPSRPPHVPK 484
S PP + HHH + + +SS S+ S + + + P RPPH P+
Sbjct: 83 SQPPHHHHHHHHHHPHSSESYSDSSSDSSSDSSSDSSSDSSSDSSEEGNDRPPRPPHHPR 142
Query: 485 PPTYPIHP 508
PP +P HP
Sbjct: 143 PPHHP-HP 149
>tr|B6HL03|B6HL03_PENCH Pc21g20530 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc21g20530 PE=4 SV=1
Length = 302
Score = 34.7 bits (78), Expect = 4.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 452 LNPSRPPHVPKPPTYPIHPTGVQQTRELNKT-TGNSKRS 565
L P+ PK PT+P++P GV+Q ++ TG+SKR+
Sbjct: 203 LPPAPVTRHPKTPTFPVNPDGVEQLHRYQRSGTGSSKRA 241
>tr|B3CLV6|B3CLV6_WOLPP Primosomal protein N OS=Wolbachia pipientis
subsp. Culex pipiens (strain wPip) GN=priA PE=4 SV=1
Length = 654
Score = 34.3 bits (77), Expect = 5.3
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +3
Query: 255 GGRKPHQRISNIRLWISQAHPNRISITIAQILLHQTWERKPQAILDVNQHGYDALLTCKQ 434
G PH ++ N + WIS I QT E+K Q +L +N+ GY L CK
Sbjct: 310 GAELPHIKVVNNKQWISNELFEGIK---------QTIEKKQQVMLFLNRRGYAQLAVCK- 359
Query: 435 TSRRCG 452
+CG
Sbjct: 360 ---KCG 362
|