BP921110 |
Clone id |
YMU001_000145_G07 |
Library |
YMU01 |
Length |
435 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000145_G07. |
Accession |
BP921110 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
CCAAGAGACAGTCCCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAGAGTAACGG AGGCGCGCAAAGGTTCCTCAGGCTGGACGGAAATCAGCCTACGAGTGCAAAGGCAGAAGG GAGCTTGACTGCGAGACCTACCAGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGAC GGTTCCAAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTG ATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCC ACCTGCGGCGGTAGTACGTCCCAAGGGTTGGGCTGTCCGACCATTAAAGCGGTACGTGAG CTGGGTTCAGAACGTCGTGAGACAGTACGGTCCATATCCGGTGCGGGCGCTAGAGCATTG AGGGGACCTTTCCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PLI5 |
Definition |
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum |
Align length |
88 |
Score (bit) |
89.4 |
E-value |
6.0e-18 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4EE25 |
Definition |
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858 |
Align length |
111 |
Score (bit) |
180.0 |
E-value |
4.0e-44 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921110|Adiantum capillus-veneris mRNA, clone: YMU001_000145_G07. (435 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste... 180 4e-44 tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin... 179 8e-44 tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clost... 171 2e-41 tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil... 161 1e-38 tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Rumin... 157 2e-37 tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost... 122 1e-30 tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost... 122 1e-30 tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost... 122 1e-30 tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost... 122 1e-30 tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragmen... 122 1e-30 tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep... 134 3e-30 tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clost... 119 2e-29 tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragmen... 119 2e-29 tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost... 118 2e-29 tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost... 118 2e-29 tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost... 118 2e-29 tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost... 118 2e-29 tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost... 118 2e-29 tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost... 118 2e-29 tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph... 130 3e-29 tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost... 115 2e-28 tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo... 115 2e-28 tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein OS=Clost... 113 6e-28 tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein OS=Eubac... 125 1e-27 tr|B5HM15|B5HM15_9ACTO Putative uncharacterized protein OS=Strep... 110 5e-26 tr|B5G7E4|B5G7E4_9ACTO Putative uncharacterized protein OS=Strep... 110 5e-26 tr|A8R9P5|A8R9P5_9FIRM Putative uncharacterized protein OS=Eubac... 107 1e-25 tr|B4V362|B4V362_9ACTO Putative uncharacterized protein OS=Strep... 110 2e-25 tr|B0A9C5|B0A9C5_9CLOT Putative uncharacterized protein OS=Clost... 100 3e-23 tr|B0A7G5|B0A7G5_9CLOT Putative uncharacterized protein OS=Clost... 100 3e-23
>tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858 GN=LMOh7858_1903 PE=4 SV=1 Length = 112
Score = 180 bits (456), Expect = 4e-44 Identities = 88/111 (79%), Positives = 94/111 (84%) Frame = +2
Query: 83 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 262 +DGN S KA+GSLTAR TSRAGTKVGLSDP VP GRA+AQRIK T GITG S PRVHI Sbjct: 1 MDGNHSQSVKAQGSLTARLTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHI 60
Query: 263 DGKVWHLDVGSSPPAAVVRPKGWAVRPLKRYVSWVQNVVRQYGPYPVRALE 415 DG+VWHLDVGSS P AVV PKGWAVRPLKR+ SWVQNVVRQ+GPYP RA E Sbjct: 61 DGEVWHLDVGSSHPGAVVGPKGWAVRPLKRHASWVQNVVRQFGPYPSRAQE 111
>tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_01295 PE=4 SV=1 Length = 109
Score = 179 bits (453), Expect = 8e-44 Identities = 88/109 (80%), Positives = 91/109 (83%) Frame = +2
Query: 83 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 262 +DGN P SAKAEGSLTA PT AGTKVGLSDP V SG A+AQRIK TLGITG S PRVHI Sbjct: 1 MDGNHPKSAKAEGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHI 60
Query: 263 DGKVWHLDVGSSPPAAVVRPKGWAVRPLKRYVSWVQNVVRQYGPYPVRA 409 DG VWHLDVGSS P AVV PKGWAVRPLKRY SWVQNVVRQ+GPYP A Sbjct: 61 DGVVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPAWA 109
>tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clostridium hiranonis DSM 13275 GN=CLOHIR_02084 PE=4 SV=1 Length = 169
Score = 171 bits (432), Expect = 2e-41 Identities = 87/134 (64%), Positives = 96/134 (71%) Frame = +2
Query: 8 TVPGRQFLWGVGLPKSNGGAQRFLRLDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVP 187 T+ G QF WG LPK NGGAQRF + T K L + + +VGLSDP V Sbjct: 36 TLSGGQFDWGGRLPKGNGGAQRFSQHGRKSCTECKGIRELDCKTYRSSKDEVGLSDPVVL 95
Query: 188 SGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDVGSSPPAAVVRPKGWAVRPLKRYVSWV 367 SGRA+AQRIK TLGITG S PRVHIDG+VWHLDVGSS P AVV PKGWAVRPLK Y SWV Sbjct: 96 SGRAIAQRIKATLGITGLSPPRVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKWYASWV 155
Query: 368 QNVVRQYGPYPVRA 409 QNVVRQ+GPYP +A Sbjct: 156 QNVVRQFGPYPSQA 169
>tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacillus megaterium PE=4 SV=1 Length = 95
Score = 161 bits (408), Expect = 1e-38 Identities = 77/92 (83%), Positives = 81/92 (88%) Frame = +2
Query: 125 LTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDVGSSPP 304 +TAR TSRAGTKVGLSDP VP GRA+AQRIK T GITG S PRVHIDG+VWHLDVGSS P Sbjct: 1 MTARTTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHIDGEVWHLDVGSSHP 60
Query: 305 AAVVRPKGWAVRPLKRYVSWVQNVVRQYGPYP 400 AVV PKGWAVRPLKRY SWVQNVVRQ+GPYP Sbjct: 61 GAVVGPKGWAVRPLKRYASWVQNVVRQFGPYP 92
>tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04125 PE=4 SV=1 Length = 108
Score = 157 bits (397), Expect = 2e-37 Identities = 78/100 (78%), Positives = 82/100 (82%) Frame = +2
Query: 110 KAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDV 289 ++ GSLTA PT AGTKVGLSDP V SG A+AQRIK TLGITG S PRVHIDG VWHLDV Sbjct: 9 QSRGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHIDGVVWHLDV 68
Query: 290 GSSPPAAVVRPKGWAVRPLKRYVSWVQNVVRQYGPYPVRA 409 GSS P AVV KGWAVRPLKRY SWVQNVVRQ+GPYP A Sbjct: 69 GSSHPGAVVGLKGWAVRPLKRYASWVQNVVRQFGPYPAWA 108
>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4 SV=1 Length = 213
Score = 122 bits (305), Expect(2) = 1e-30 Identities = 58/74 (78%), Positives = 61/74 (82%) Frame = -3
Query: 298 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 119 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 118 FCLCTRRLISVQPE 77 FCLCT R IS + E Sbjct: 62 FCLCTLRAISDRAE 75
Score = 34.3 bits (77), Expect(2) = 1e-30 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -2
Query: 77 GTFARLRYSLGGLRPIETVYLGLS 6 GTF RLRY LGG RP +T +L +S Sbjct: 76 GTFGRLRYLLGGDRPSQTAHLAMS 99
>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4 SV=1 Length = 213
Score = 122 bits (305), Expect(2) = 1e-30 Identities = 58/74 (78%), Positives = 61/74 (82%) Frame = -3
Query: 298 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 119 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 118 FCLCTRRLISVQPE 77 FCLCT R IS + E Sbjct: 62 FCLCTLRAISDRAE 75
Score = 34.3 bits (77), Expect(2) = 1e-30 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -2
Query: 77 GTFARLRYSLGGLRPIETVYLGLS 6 GTF RLRY LGG RP +T +L +S Sbjct: 76 GTFGRLRYLLGGDRPSQTAHLAMS 99
>tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clostridium botulinum C str. Eklund GN=CBC_0392 PE=4 SV=1 Length = 213
Score = 122 bits (305), Expect(2) = 1e-30 Identities = 58/74 (78%), Positives = 61/74 (82%) Frame = -3
Query: 298 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 119 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 118 FCLCTRRLISVQPE 77 FCLCT R IS + E Sbjct: 62 FCLCTLRAISDRAE 75
Score = 34.3 bits (77), Expect(2) = 1e-30 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -2
Query: 77 GTFARLRYSLGGLRPIETVYLGLS 6 GTF RLRY LGG RP +T +L +S Sbjct: 76 GTFGRLRYLLGGDRPSQTAHLAMS 99
>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4 SV=1 Length = 210
Score = 122 bits (305), Expect(2) = 1e-30 Identities = 58/74 (78%), Positives = 61/74 (82%) Frame = -3
Query: 298 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 119 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 118 FCLCTRRLISVQPE 77 FCLCT R IS + E Sbjct: 62 FCLCTLRAISDRAE 75
Score = 34.3 bits (77), Expect(2) = 1e-30 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -2
Query: 77 GTFARLRYSLGGLRPIETVYLGLS 6 GTF RLRY LGG RP +T +L +S Sbjct: 76 GTFGRLRYLLGGDRPSQTAHLAMS 99
>tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragment) OS=Clostridium botulinum C str. Eklund GN=CBC_A1887 PE=4 SV=1 Length = 107
Score = 122 bits (305), Expect(2) = 1e-30 Identities = 58/74 (78%), Positives = 61/74 (82%) Frame = -3
Query: 298 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 119 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 118 FCLCTRRLISVQPE 77 FCLCT R IS + E Sbjct: 62 FCLCTLRAISDRAE 75
Score = 34.3 bits (77), Expect(2) = 1e-30 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -2
Query: 77 GTFARLRYSLGGLRPIETVYLGLS 6 GTF RLRY LGG RP +T +L +S Sbjct: 76 GTFGRLRYLLGGDRPSQTAHLAMS 99
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