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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921121
Clone id YMU001_000146_A04
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGAAAGCACTCTGTGCAAAATTTCACTTTCACAATGTTCAAATGGTTGCGATCTCAATT
TGCTGCTTGCAGTTCTTGCCAGTGGCTCACGGTTTAGCTCAATGGAGTGCAAGTCATCAT
CATCATCATCATCATCATCACCATCTGAATAAGCATTTTGCTTCATTTGTTGGTCAGAAC
CTGAATCACCAGAATCTCTACCTGATAGTGTACCGCGTCGCACTCTGGAATGAAAGGAGT
CCGCCAGATTGCTGCCAATAACAATGTCCAATGAATGGCTGTCCGGATCCTGATTTGTGT
CATTAGTTACACTTCTTGCTGAGCCATCGGCCCTTTTTGCTTTGAGAAAAGCCTCTAATT
GACTTCTCAGCTTGTTGAAAGCAGTATTTTTCTCCTCTAATTCTAATTTTGCCTCCATTA
ACTTCAATTGAACCCTTTCTTCCCTCCAAATCTCAGCCATCTGAAGCATCTTCCTTTCCT
CCTCCACCTCTTCCTTCACTTTAGCAGATTGCAATTTCAATTCTTCCACTCTTGCTTTAT
CCTGCCCAATCTCTATGAG
■■Homology search results ■■ -
sp_hit_id Q3UV17
Definition sp|Q3UV17|K22O_MOUSE Keratin, type II cytoskeletal 2 oral OS=Mus musculus
Align length 58
Score (bit) 30.0
E-value 8.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921121|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_A04.
         (559 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3UV17|K22O_MOUSE Keratin, type II cytoskeletal 2 oral OS=Mus...    30   8.0  

>sp|Q3UV17|K22O_MOUSE Keratin, type II cytoskeletal 2 oral OS=Mus
           musculus GN=Krt76 PE=2 SV=1
          Length = 594

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -3

Query: 500 SEGRGGGGKEDASDG*DLEGRKGSIEVNGGKIRIRGEKYCFQQAEKSIRGFSQSKKGR 327
           S GR GG    +S G    G  GS   +GG I +  ++  F          S  K GR
Sbjct: 517 SSGRSGGSSSSSSRGSSSRGSSGSRLGSGGSISVSQQRMGFNSGGSQTSVGSSYKSGR 574
tr_hit_id A5BS09
Definition tr|A5BS09|A5BS09_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 88
Score (bit) 60.8
E-value 5.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921121|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_A04.
         (559 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BS09|A5BS09_VITVI Putative uncharacterized protein OS=Vitis...    61   5e-08
tr|Q9CAW9|Q9CAW9_ARATH Putative uncharacterized protein F24K9.26...    60   8e-08
tr|Q6L4U8|Q6L4U8_ORYSJ Putative uncharacterized protein P0010D04...    60   1e-07
tr|B8AZK9|B8AZK9_ORYSI Putative uncharacterized protein OS=Oryza...    60   1e-07
tr|A3B5I1|A3B5I1_ORYSJ Putative uncharacterized protein OS=Oryza...    60   1e-07
tr|Q9LPT5|Q9LPT5_ARATH F11F12.2 protein (Putative uncharacterize...    59   1e-07
tr|A7P0R0|A7P0R0_VITVI Chromosome chr19 scaffold_4, whole genome...    59   1e-07
tr|Q945L6|Q945L6_ARATH AT3g11590/F24K9_26 OS=Arabidopsis thalian...    59   2e-07
tr|Q9LTQ8|Q9LTQ8_ARATH Gb|AAF00675.1 OS=Arabidopsis thaliana PE=...    58   4e-07
tr|B7ZWR9|B7ZWR9_ARATH At3g20350 OS=Arabidopsis thaliana PE=2 SV=1     58   4e-07
tr|A7QZN7|A7QZN7_VITVI Chromosome chr10 scaffold_282, whole geno...    57   5e-07
tr|A9SH45|A9SH45_PHYPA Predicted protein (Fragment) OS=Physcomit...    57   7e-07
tr|Q7XVC5|Q7XVC5_ORYSJ OSJNBa0072D21.15 protein (OSJNBa0084N21.1...    57   9e-07
tr|Q0JDR3|Q0JDR3_ORYSJ Os04g0382800 protein OS=Oryza sativa subs...    57   9e-07
tr|B8AT99|B8AT99_ORYSI Putative uncharacterized protein OS=Oryza...    57   9e-07
tr|A9TYJ9|A9TYJ9_PHYPA Predicted protein (Fragment) OS=Physcomit...    57   9e-07
tr|Q84P68|Q84P68_ORYSJ Putative uncharacterized protein (Fragmen...    55   2e-06
tr|Q7XPQ1|Q7XPQ1_ORYSJ cDNA, clone: J090049M22, full insert sequ...    55   2e-06
tr|Q0J9Y7|Q0J9Y7_ORYSJ Os04g0625000 protein (Fragment) OS=Oryza ...    55   2e-06
tr|A7PP86|A7PP86_VITVI Chromosome chr8 scaffold_23, whole genome...    55   2e-06
tr|A3AXL0|A3AXL0_ORYSJ Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A2XXS7|A2XXS7_ORYSI Putative uncharacterized protein OS=Oryza...    55   2e-06
tr|A9TK20|A9TK20_PHYPA Predicted protein (Fragment) OS=Physcomit...    51   4e-05
tr|B6TAC0|B6TAC0_MAIZE Putative uncharacterized protein OS=Zea m...    50   6e-05
tr|Q69L86|Q69L86_ORYSJ Putative uncharacterized protein B1026C12...    50   8e-05
tr|Q0D978|Q0D978_ORYSJ Os07g0102200 protein OS=Oryza sativa subs...    50   8e-05
tr|A3BFR0|A3BFR0_ORYSJ Putative uncharacterized protein OS=Oryza...    50   8e-05
tr|A2YHA8|A2YHA8_ORYSI Putative uncharacterized protein OS=Oryza...    50   8e-05
tr|B4F9W8|B4F9W8_MAIZE Putative uncharacterized protein OS=Zea m...    49   2e-04
tr|A9RNM8|A9RNM8_PHYPA Predicted protein (Fragment) OS=Physcomit...    49   2e-04

>tr|A5BS09|A5BS09_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_019055 PE=4 SV=1
          Length = 629

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 35/88 (39%), Positives = 50/88 (56%)
 Frame = -1

Query: 550 IGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFNK 371
           IG+D+A VEELK +SA        ER+MLQ+A++ REERVQ            KN A +K
Sbjct: 348 IGEDRAEVEELKRESAKVREEVEKEREMLQLADVLREERVQMKLSEAKYQFEEKNAAVDK 407

Query: 370 LRSQLEAFLKAKRADGSARSVTNDTNQD 287
           LR +LEA+L++K  +       N +  +
Sbjct: 408 LRHELEAYLRSKSGNDKNNGSPNPSGSE 435


>tr|Q9CAW9|Q9CAW9_ARATH Putative uncharacterized protein F24K9.26
           (At3g11590/F24K9_26) OS=Arabidopsis thaliana
           GN=At3g11590 PE=2 SV=1
          Length = 622

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 36/80 (45%), Positives = 46/80 (57%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           +I +DKA VEELK +S         ER+MLQ+A+  REERVQ            KN A +
Sbjct: 373 DISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAKHQLEEKNAAVD 432

Query: 373 KLRSQLEAFLKAKRADGSAR 314
           KLR+QL+ +LKAKR     R
Sbjct: 433 KLRNQLQTYLKAKRCKEKTR 452


>tr|Q6L4U8|Q6L4U8_ORYSJ Putative uncharacterized protein P0010D04.11
           OS=Oryza sativa subsp. japonica GN=P0010D04.11 PE=4 SV=1
          Length = 677

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           EI +DKA VE LK +S         E+KMLQMAE+WREERVQ            K +  +
Sbjct: 323 EIAEDKAEVEALKSESMKMRDEVEEEKKMLQMAEVWREERVQMKLVDAKLTLDSKYSQLS 382

Query: 373 KLRSQLEAFLKAKRADGSARSVTND 299
           KL+S LE+FL   + +G  +    D
Sbjct: 383 KLQSDLESFLSFHQGNGVNKEALRD 407


>tr|B8AZK9|B8AZK9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20484 PE=4 SV=1
          Length = 552

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           EI +DKA VE LK +S         E+KMLQMAE+WREERVQ            K +  +
Sbjct: 198 EIAEDKAEVEALKSESMKMRDEVEEEKKMLQMAEVWREERVQMKLVDAKLTLDSKYSQLS 257

Query: 373 KLRSQLEAFLKAKRADGSARSVTND 299
           KL+S LE+FL   + +G  +    D
Sbjct: 258 KLQSDLESFLSFHQGNGVNKEALRD 282


>tr|A3B5I1|A3B5I1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018303 PE=4 SV=1
          Length = 556

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           EI +DKA VE LK +S         E+KMLQMAE+WREERVQ            K +  +
Sbjct: 202 EIAEDKAEVEALKSESMKMRDEVEEEKKMLQMAEVWREERVQMKLVDAKLTLDSKYSQLS 261

Query: 373 KLRSQLEAFLKAKRADGSARSVTND 299
           KL+S LE+FL   + +G  +    D
Sbjct: 262 KLQSDLESFLSFHQGNGVNKEALRD 286


>tr|Q9LPT5|Q9LPT5_ARATH F11F12.2 protein (Putative uncharacterized
           protein F17J6.18) OS=Arabidopsis thaliana GN=F17J6.18
           PE=4 SV=1
          Length = 725

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           EIG+DKA +E LK +S         ER+MLQMAE+WREERVQ            + +  N
Sbjct: 355 EIGEDKAEIEALKRESMSLREEVDDERRMLQMAEVWREERVQMKLIDAKVALEERYSQMN 414

Query: 373 KLRSQLEAFLKAK 335
           KL   LE+FL+++
Sbjct: 415 KLVGDLESFLRSR 427


>tr|A7P0R0|A7P0R0_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027328001
           PE=4 SV=1
          Length = 695

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 44/82 (53%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           EIG DKA  E LK +S         ERKMLQMAE+WREERVQ            K    N
Sbjct: 358 EIGDDKAEAESLKRESMKLRDEMEEERKMLQMAEVWREERVQMKLVAAKVALEEKYAQMN 417

Query: 373 KLRSQLEAFLKAKRADGSARSV 308
           K+ + + AFL++K A+   + +
Sbjct: 418 KVMADIAAFLRSKGANPDVKEM 439


>tr|Q945L6|Q945L6_ARATH AT3g11590/F24K9_26 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 622

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 35/80 (43%), Positives = 45/80 (56%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           +I +DKA VEELK +S         ER+MLQ+A+  REERVQ            KN A +
Sbjct: 373 DISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAKHQLEEKNAAVD 432

Query: 373 KLRSQLEAFLKAKRADGSAR 314
           KLR+QL+ +LK KR     R
Sbjct: 433 KLRNQLQTYLKTKRCKEKTR 452


>tr|Q9LTQ8|Q9LTQ8_ARATH Gb|AAF00675.1 OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 495

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 33/77 (42%), Positives = 42/77 (54%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           EI +DKA +E LK +S         ER+MLQMAE+WREERVQ            K +  N
Sbjct: 154 EIEEDKAEIEALKSESMNLREEVDDERRMLQMAEVWREERVQMKLIDAKVTLEEKYSQMN 213

Query: 373 KLRSQLEAFLKAKRADG 323
           KL   +EAFL ++   G
Sbjct: 214 KLVGDMEAFLSSRNTTG 230


>tr|B7ZWR9|B7ZWR9_ARATH At3g20350 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 673

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 33/77 (42%), Positives = 42/77 (54%)
 Frame = -1

Query: 553 EIGQDKARVEELKLQSAXXXXXXXXERKMLQMAEIWREERVQXXXXXXXXXXXXKNTAFN 374
           EI +DKA +E LK +S         ER+MLQMAE+WREERVQ            K +  N
Sbjct: 332 EIEEDKAEIEALKSESMNLREEVDDERRMLQMAEVWREERVQMKLIDAKVTLEEKYSQMN 391

Query: 373 KLRSQLEAFLKAKRADG 323
           KL   +EAFL ++   G
Sbjct: 392 KLVGDMEAFLSSRNTTG 408