BP921138 |
Clone id |
YMU001_000146_B10 |
Library |
YMU01 |
Length |
489 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000146_B10. |
Accession |
BP921138 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3680Contig1 |
Sequence |
CCCTTGGGTACTATCTAGGTCTTTAATCCACATGTAGATAGGCACCATCACATAGTAGAG TGAAGCTATTACACCAAGAAAGAATCTGTACAGGAAGACCAAGGGATTGACATTTGATTT GACATCTTCTGCCTTAGGCCCAAGCTGCAGTGGAGAATCGCCTGACTCTGGTTTTACGCC CATTACCGAGCAACCCATAATTAATCCATGCCTTCTCACTCCTCTGTACCAGTTTGGTCC AATCCTTTTAATTTTCACATCCACAAAACCAGCCTTGGTGAACCATTCTGTGTACTCTTC TTCTGTTGGAAACAACATCCAGACATCTGCAAAGAACCTAGATAACCAATACGTTGGATG GACTGGTCCAATGAGGCAAGCTTTTCCACCTTTTTTCAACACTCTGTAAGCTTCCTTTAT ACCTCTTTGAGGATCTGGCCAGTACTCTATACTGCCTGCAGAAACGTATCGGTCAACATA ATCAGTAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23525 |
Definition |
sp|P23525|IN37_SPIOL 37 kDa inner envelope membrane protein, chloroplastic OS=Spinacia oleracea |
Align length |
157 |
Score (bit) |
291.0 |
E-value |
8.0e-79 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921138|Adiantum capillus-veneris mRNA, clone: YMU001_000146_B10. (489 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P23525|IN37_SPIOL 37 kDa inner envelope membrane protein, chl... 291 8e-79 sp|P46326|YXBB_BACSU Uncharacterized protein yxbB OS=Bacillus su... 40 0.006 sp|Q5KXU0|UBIE_GEOKA Menaquinone biosynthesis methyltransferase ... 37 0.049 sp|A8GPI0|UBIE_RICAH Ubiquinone/menaquinone biosynthesis methylt... 36 0.11 sp|P49016|UBIE_LACLA Menaquinone biosynthesis methyltransferase ... 35 0.14 sp|O86169|UBIE_BACST Menaquinone biosynthesis methyltransferase ... 35 0.14 sp|Q4UMW4|UBIE_RICFE Ubiquinone/menaquinone biosynthesis methylt... 35 0.18 sp|O66128|UBIE_MICLU Menaquinone biosynthesis methyltransferase ... 35 0.24 sp|P94298|UBIE_BACPF Menaquinone biosynthesis methyltransferase ... 35 0.24 sp|P05447|YAT4_RHOBL ATP synthase subunits region ORF 4 OS=Rhodo... 34 0.41 sp|Q8CWG0|UBIE_OCEIH Menaquinone biosynthesis methyltransferase ... 34 0.41 sp|Q1RJY5|UBIE_RICBR Ubiquinone/menaquinone biosynthesis methylt... 33 0.70 sp|A8GXR2|UBIE_RICB8 Ubiquinone/menaquinone biosynthesis methylt... 33 0.70 sp|Q58523|Y1123_METJA Uncharacterized protein MJ1123 OS=Methanoc... 33 0.92 sp|Q74EU2|UBIE_GEOSL Ubiquinone/menaquinone biosynthesis methylt... 33 0.92 sp|Q58392|MTM1_METJA Modification methylase MjaI OS=Methanocaldo... 33 0.92 sp|P79222|CALCR_RABIT Calcitonin receptor OS=Oryctolagus cunicul... 32 1.2 sp|P30988|CALCR_HUMAN Calcitonin receptor OS=Homo sapiens GN=CAL... 32 1.2 sp|A8F2G9|UBIE_RICM5 Ubiquinone/menaquinone biosynthesis methylt... 32 1.6 sp|Q92SK7|UBIE_RHIME Ubiquinone/menaquinone biosynthesis methylt... 32 1.6 sp|Q8KF69|UBIE_CHLTE Menaquinone biosynthesis methyltransferase ... 32 1.6 sp|B0T7D0|UBIE_CAUSK Ubiquinone/menaquinone biosynthesis methylt... 32 1.6 sp|Q685J3|MUC17_HUMAN Mucin-17 OS=Homo sapiens GN=MUC17 PE=1 SV=1 32 2.0 sp|A8GT99|UBIE_RICRS Ubiquinone/menaquinone biosynthesis methylt... 32 2.0 sp|B0BUT9|UBIE_RICRO Ubiquinone/menaquinone biosynthesis methylt... 32 2.0 sp|Q9ZCP3|UBIE_RICPR Ubiquinone/menaquinone biosynthesis methylt... 32 2.0 sp|Q92GT5|UBIE_RICCN Ubiquinone/menaquinone biosynthesis methylt... 32 2.0 sp|P46924|LEUO_SALTY Probable HTH-type transcriptional regulator... 31 2.6 sp|O08893|CALCR_CAVPO Calcitonin receptor OS=Cavia porcellus GN=... 31 2.6 sp|Q68W57|UBIE_RICTY Ubiquinone/menaquinone biosynthesis methylt... 31 2.7
>sp|P23525|IN37_SPIOL 37 kDa inner envelope membrane protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 344
Score = 291 bits (746), Expect = 8e-79 Identities = 133/157 (84%), Positives = 142/157 (90%) Frame = -1
Query: 489 PTDYVDRYVSAGSIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHPTYWLSRFFADVWMLF 310 PTDY DRYVSAGSIEYWPDPQRGI+EAYRVLK GGKACLIGPV+PT+WLSRFFADVWMLF Sbjct: 179 PTDYADRYVSAGSIEYWPDPQRGIREAYRVLKLGGKACLIGPVYPTFWLSRFFADVWMLF 238
Query: 309 PTEEEYTEWFTKAGFVDVKIKRIGPNWYRGVRRHGLIMGCSVMGVKPESGDSPLQLGPKA 130 P EEEY EWF KAGF DV++KRIGP WYRGVRRHGLIMGCSV GVKP SGDSPLQLGPK Sbjct: 239 PKEEEYIEWFQKAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKV 298
Query: 129 EDVKSNVNPLVFLYRFFLGVIASLYYVMVPIYMWIKD 19 EDV+ V+PLVFLYRF LG +AS YYV+VPIYMWIKD Sbjct: 299 EDVQKPVHPLVFLYRFLLGALASTYYVLVPIYMWIKD 335
>sp|P46326|YXBB_BACSU Uncharacterized protein yxbB OS=Bacillus subtilis GN=yxbB PE=3 SV=1 Length = 244
Score = 40.0 bits (92), Expect = 0.006 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = -1
Query: 480 YVDRYVSAGSIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHP 355 Y D VS + +W D +G+KE YRVL GGK ++ +P Sbjct: 104 YADFIVSYSCLHHWEDVVKGLKECYRVLAPGGKIVILDTFNP 145
>sp|Q5KXU0|UBIE_GEOKA Menaquinone biosynthesis methyltransferase ubiE OS=Geobacillus kaustophilus GN=ubiE PE=3 SV=1 Length = 234
Score = 37.0 bits (84), Expect = 0.049 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 27/101 (26%) Frame = -1
Query: 468 YVSAG-SIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHPT--------YWLSRFFADV-- 322 YV+ G + PD +KE +RV K GG + PT Y+ RF + Sbjct: 119 YVTIGFGLRNVPDYMTVLKEMHRVTKPGGMTVCLETSQPTLFGFRQLYYFYFRFIMPLFG 178
Query: 321 -----------WML-----FPTEEEYTEWFTKAGFVDVKIK 247 W+ FP +E E F +AGFVDV++K Sbjct: 179 KLLAKSYEEYSWLQESAREFPGRDELAEMFREAGFVDVEVK 219
>sp|A8GPI0|UBIE_RICAH Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rickettsia akari (strain Hartford) GN=ubiE PE=3 SV=1 Length = 248
Score = 35.8 bits (81), Expect = 0.11 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 26/109 (23%) Frame = -1
Query: 489 PTDYVDRYVSAGSIEYWPDPQRGIKEAYRVLKKGGK-ACL-IGPVHPTYWLS-------- 340 P + D Y A I PD + +KEAYRVLK GK CL V +Y+ Sbjct: 127 PDNSFDYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKESYFKDFYKFYSFS 186
Query: 339 ----------------RFFADVWMLFPTEEEYTEWFTKAGFVDVKIKRI 241 + + LFP+++E+ +AGF +V K + Sbjct: 187 IIPTIGQVITGNKEAYEYLVESIELFPSQDEFRIMIKEAGFEEVGYKNL 235
>sp|P49016|UBIE_LACLA Menaquinone biosynthesis methyltransferase ubiE OS=Lactococcus lactis subsp. lactis GN=ubiE PE=3 SV=1 Length = 252
Score = 35.4 bits (80), Expect = 0.14 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 26/93 (27%) Frame = -1
Query: 438 PDPQRGIKEAYRVLKKGGKACLIGPVHPTY----------------WLSRFFAD-----V 322 PD +KE +RVLK GG+ I HPT +L + FA Sbjct: 136 PDYLTVLKEIFRVLKPGGRVVCIETSHPTLPIYKQAFELYFKNVMPFLGKVFAKSLKEYQ 195
Query: 321 WML-----FPTEEEYTEWFTKAGFVDVKIKRIG 238 W+ FP + E F KAGFV V+ ++ G Sbjct: 196 WLQKSAEDFPDAKTLEELFRKAGFVAVEYQKHG 228
>sp|O86169|UBIE_BACST Menaquinone biosynthesis methyltransferase ubiE OS=Bacillus stearothermophilus GN=ubiE PE=3 SV=1 Length = 234
Score = 35.4 bits (80), Expect = 0.14 Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 27/101 (26%) Frame = -1
Query: 468 YVSAG-SIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHPT--------YWLSRFFADV-- 322 YV+ G + PD +KE +RV K GG + PT Y+ RF + Sbjct: 119 YVTIGFGLRNVPDYMTVLKEMHRVTKPGGITVCLETSQPTLFGFRQLYYFYFRFIMPLFG 178
Query: 321 -----------WML-----FPTEEEYTEWFTKAGFVDVKIK 247 W+ FP +E E F AGFVDV++K Sbjct: 179 KLLAKSYEEYSWLQESAREFPGRDELAEMFRAAGFVDVEVK 219
>sp|Q4UMW4|UBIE_RICFE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Rickettsia felis GN=ubiE PE=3 SV=1 Length = 248
Score = 35.0 bits (79), Expect = 0.18 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 26/104 (25%) Frame = -1
Query: 474 DRYVSAGSIEYWPDPQRGIKEAYRVLKKGGK-ACL-IGPVHPTYWLS------------- 340 D Y A I PD + +KEAYRVLK GK CL V +Y+ Sbjct: 132 DYYTIAFGIRNVPDINKALKEAYRVLKPMGKFICLEFSKVKESYFKDFYKFYSFSIIPTI 191
Query: 339 -----------RFFADVWMLFPTEEEYTEWFTKAGFVDVKIKRI 241 + + LFP+++E+ +AGF +V K + Sbjct: 192 GQAITGNKEAYEYLVESIELFPSQDEFRIMLKEAGFEEVSYKNL 235
>sp|O66128|UBIE_MICLU Menaquinone biosynthesis methyltransferase ubiE OS=Micrococcus luteus GN=ubiE PE=3 SV=1 Length = 246
Score = 34.7 bits (78), Expect = 0.24 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = -1
Query: 483 DYVDRYVSAG-SIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHPT 352 D + Y + G + PD ++G++E YRVLK GG ++ HPT Sbjct: 123 DNIFDYTTIGFGLRNLPDYKKGLEEMYRVLKPGGMIVVLETSHPT 167
>sp|P94298|UBIE_BACPF Menaquinone biosynthesis methyltransferase ubiE (Fragment) OS=Bacillus pseudofirmus GN=ubiE PE=3 SV=1 Length = 221
Score = 34.7 bits (78), Expect = 0.24 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 26/90 (28%) Frame = -1
Query: 438 PDPQRGIKEAYRVLKKGGKACLIGPVHPT---------YWLSR----------------- 337 PD + +KE +RV+KKGGK + PT ++ R Sbjct: 115 PDYMQVLKEMHRVVKKGGKVVCLETSQPTIPVFKNLYFFYFRRVMPVFGKVFAKSYDEYS 174
Query: 336 FFADVWMLFPTEEEYTEWFTKAGFVDVKIK 247 + + M FP E+ E F +AGF V +K Sbjct: 175 WLQESTMSFPNREKLAEMFREAGFERVDVK 204
>sp|P05447|YAT4_RHOBL ATP synthase subunits region ORF 4 OS=Rhodopseudomonas blastica PE=4 SV=1 Length = 255
Score = 33.9 bits (76), Expect = 0.41 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = -1
Query: 489 PTDYVDRYVSAGSIEYWPDPQRGIKEAYRVLKKGGKACLIGPVHPTYWLSR 337 PT VDR +E +P + EA+RVL GG+A + P W R Sbjct: 93 PTGLVDRLAVMHGLETSENPSAVLDEAHRVLGPGGRALFVVPNRAGLWSRR 143
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RK18 |
Definition |
tr|A9RK18|A9RK18_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
156 |
Score (bit) |
298.0 |
E-value |
9.0e-80 |
Report |
|