NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921140
Clone id YMU001_000146_B12
Library
Length 644
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCACTCGCTGATCATTTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTGGC
AGATGCTGCTCCCTCGTGCGCTCCGGCAGAGAGCCTATCTAAGAGCTTCTCCGGCCTCAG
GCCCACTACCCTCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAGCCG
TGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTA
CTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGG
CTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGG
TAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCA
AGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTT
CATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCA
GAAGCCCTCTGTCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTT
CCCATTTCCCACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 158
Score (bit) 185.0
E-value 2.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921140|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_B12.
         (644 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   185   2e-46
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   184   3e-46
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   183   8e-46
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   183   8e-46
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   181   2e-45
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   181   4e-45
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   180   5e-45
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   180   6e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   179   8e-45
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   179   1e-44
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   179   1e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   178   2e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   177   3e-44
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   177   5e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   177   5e-44
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   177   5e-44
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   177   5e-44
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   177   5e-44
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   176   7e-44
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   176   7e-44
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   176   9e-44
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   176   9e-44
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   176   9e-44
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   175   2e-43
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   174   5e-43

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  185 bits (470), Expect = 2e-46
 Identities = 89/158 (56%), Positives = 110/158 (69%), Gaps = 6/158 (3%)
 Frame = +2

Query: 92  SLSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 256
           SL+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYLPPLS
Sbjct: 21  SLAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLS 79

Query: 257 SEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 433
            E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A 
Sbjct: 80  DEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQ 139

Query: 434 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 547
           V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 140 VMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  184 bits (467), Expect = 3e-46
 Identities = 92/161 (57%), Positives = 111/161 (68%), Gaps = 5/161 (3%)
 Frame = +2

Query: 83  PAES-LSKSFSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLP 247
           PA+S +   F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLP
Sbjct: 17  PAQSSMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLP 76

Query: 248 PLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 427
           PLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA
Sbjct: 77  PLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDA 136

Query: 428 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           + V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 137 SQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  183 bits (464), Expect = 8e-46
 Identities = 89/152 (58%), Positives = 106/152 (69%), Gaps = 4/152 (2%)
 Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 274
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 275 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 455 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
             K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  183 bits (464), Expect = 8e-46
 Identities = 91/162 (56%), Positives = 111/162 (68%), Gaps = 6/162 (3%)
 Frame = +2

Query: 83  PAES-LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYL 244
           PA+S +   F+GLR     P T  A K+ + L  SNG +VS M VW P   KKFETLSYL
Sbjct: 17  PAQSNMVAPFNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYL 75

Query: 245 PPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 424
           PPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC D
Sbjct: 76  PPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTD 135

Query: 425 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           A+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 136 ASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  181 bits (460), Expect = 2e-45
 Identities = 90/162 (55%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
 Frame = +2

Query: 80  APAES-LSKSFSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYL 244
           +PA+S +   F+ L+ T+      K+ N ++   SNG RV  M VW P   KKFETLSYL
Sbjct: 18  SPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYL 77

Query: 245 PPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 421
           PPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC 
Sbjct: 78  PPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCN 137

Query: 422 DAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 547
           D++ VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 138 DSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  181 bits (458), Expect = 4e-45
 Identities = 89/160 (55%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
 Frame = +2

Query: 83  PAESLSKSFSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPP 250
           PA++    F+  R +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPP
Sbjct: 18  PAQTNMVPFNACRSSVPFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPP 77

Query: 251 LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 430
           LS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+
Sbjct: 78  LSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDAS 137

Query: 431 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
            V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 138 QVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  180 bits (457), Expect = 5e-45
 Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 4/160 (2%)
 Frame = +2

Query: 83  PAESLSKSFSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPP 250
           PA+S    F+  R +    A  K+ N LS    NG RVS M VW P   KKFETLSYLPP
Sbjct: 18  PAQSSMVPFNACRSSVPFPATRKANNNLSTLPGNGGRVSCMQVWPPEGLKKFETLSYLPP 77

Query: 251 LSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 430
           LS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+
Sbjct: 78  LSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDAS 137

Query: 431 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
            V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 138 QVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  180 bits (456), Expect = 6e-45
 Identities = 81/150 (54%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
 Frame = +2

Query: 107 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 277
           F GL+ T    ++   +A+  S+SNG R+  M VW     KKFETLSYLPPLS+E + KQ
Sbjct: 16  FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 278 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 457
           VD+++R  W PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA  VL E+ E 
Sbjct: 76  VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135

Query: 458 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 547
            KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 136 KKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  179 bits (455), Expect = 8e-45
 Identities = 78/127 (61%), Positives = 96/127 (75%)
 Frame = +2

Query: 167 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 346
           SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 347 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 526
           E+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ  
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168

Query: 527 GFLVQKP 547
            FL  KP
Sbjct: 169 SFLTYKP 175


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  179 bits (453), Expect = 1e-44
 Identities = 90/165 (54%), Positives = 116/165 (70%), Gaps = 9/165 (5%)
 Frame = +2

Query: 80  APAES-LSKSFSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETL 235
           APA++ +   F+GL+     PTT    K AN  S   SNG RV  M VW P   KK+ETL
Sbjct: 15  APAQANMVAPFTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETL 70

Query: 236 SYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMF 412
           SYLPPL+  Q+AK+VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMF
Sbjct: 71  SYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 130

Query: 413 GCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 547
           GC D+A V++E+AEC KEYP+A+IR++GFD  RQVQ   F+  +P
Sbjct: 131 GCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRP 175
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 157
Score (bit) 290.0
E-value 7.0e-77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921140|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_B12.
         (644 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   290   7e-77
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   202   2e-50
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   201   4e-50
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   200   5e-50
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   197   4e-49
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   196   8e-49
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   193   7e-48
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   188   3e-46
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   187   4e-46
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   187   6e-46
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   187   6e-46
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   183   7e-45
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   183   7e-45
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   183   9e-45
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   183   9e-45
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   181   4e-44
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   180   8e-44
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   179   2e-43
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   179   2e-43
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   179   2e-43
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c...   179   2e-43

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  290 bits (741), Expect = 7e-77
 Identities = 135/157 (85%), Positives = 148/157 (94%)
 Frame = +2

Query: 80  APAESLSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 259
           A AESLSKSFSGL+  TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPL++
Sbjct: 17  AAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTN 76

Query: 260 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 439
           +QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VL
Sbjct: 77  DQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVL 136

Query: 440 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           REIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 137 REIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  202 bits (513), Expect = 2e-50
 Identities = 96/161 (59%), Positives = 119/161 (73%), Gaps = 3/161 (1%)
 Frame = +2

Query: 77  CAPAESLSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 256
           C  + S+ K FSGL+ TTL+A K+    S+ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 20  CRESSSV-KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLT 78

Query: 257 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDA 427
            +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+
Sbjct: 79  DDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDS 138

Query: 428 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 139 AQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  201 bits (510), Expect = 4e-50
 Identities = 96/161 (59%), Positives = 118/161 (73%), Gaps = 3/161 (1%)
 Frame = +2

Query: 77  CAPAESLSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 256
           C  + S+ K FSGL+ TTL A K+    S+ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 20  CRESSSV-KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLT 78

Query: 257 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDA 427
            +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+
Sbjct: 79  DDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDS 138

Query: 428 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 139 AQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  200 bits (509), Expect = 5e-50
 Identities = 95/161 (59%), Positives = 120/161 (74%), Gaps = 4/161 (2%)
 Frame = +2

Query: 80  APAESLS-KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 256
           AP+ES S K+FSGL+  TL + K+    S+ NGSRV  M VW P    KFET SYLPPL+
Sbjct: 54  APSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLT 113

Query: 257 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDA 427
            +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+
Sbjct: 114 DDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDS 173

Query: 428 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           + VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 174 SQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  197 bits (502), Expect = 4e-49
 Identities = 90/153 (58%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 280
           K+FSGL+P TL + K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  196 bits (499), Expect = 8e-49
 Identities = 95/161 (59%), Positives = 116/161 (72%), Gaps = 4/161 (2%)
 Frame = +2

Query: 80  APAESLS-KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLS 256
           A  ES S K+FSGL+  TL   KS    S+ NGSRV  M VW P    KFET SYLPPLS
Sbjct: 24  ASRESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLS 83

Query: 257 SEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDA 427
            +QIA+QVD+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D+
Sbjct: 84  DDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDS 143

Query: 428 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           + VLREI EC   YP  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 144 SQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  193 bits (491), Expect = 7e-48
 Identities = 88/153 (57%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 280
           K+FSGL+  TL + ++    S+ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 452 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  188 bits (477), Expect = 3e-46
 Identities = 91/162 (56%), Positives = 114/162 (70%), Gaps = 7/162 (4%)
 Frame = +2

Query: 83  PAE-SLSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYL 244
           PA+ SL+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYL
Sbjct: 17  PAQASLAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYL 75

Query: 245 PPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 421
           PPLS E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC 
Sbjct: 76  PPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCT 135

Query: 422 DAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 547
           D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 136 DSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  187 bits (476), Expect = 4e-46
 Identities = 90/162 (55%), Positives = 112/162 (69%), Gaps = 5/162 (3%)
 Frame = +2

Query: 80  APAESLS-----KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYL 244
           +PA S S     K+FSGL+  T+ + K+ N  S+ NGSRV  M VW P    KFET SYL
Sbjct: 20  SPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYL 79

Query: 245 PPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 424
           PPLS + IAKQV++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD
Sbjct: 80  PPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQD 139

Query: 425 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           +A VLREI EC K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 140 SAQVLREIEECKKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  187 bits (474), Expect = 6e-46
 Identities = 90/156 (57%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
 Frame = +2

Query: 86  AESLS-KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 262
           +ES S K+FSGL+ +TL + K+ +  S+ NGSRV  M VW P    KFET SYLPPLS +
Sbjct: 26  SESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDD 85

Query: 263 QIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 442
            IAKQVD+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A VLR
Sbjct: 86  AIAKQVDYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLR 145

Query: 443 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 550
           EI EC K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 146 EIEECKKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181