BP921142
Clone id YMU001_000146_C03
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGTGGCTCTCACCATATCATCCCCTAAGAGCTGACCATTAGGTTGATCGGTCAAAGCGT
CTGGCGAGTCTGAAGTGAGTGACTCATTTGTGAAACGAATACTAAGAGGGCGGTCGTCAT
CATCCGATGAATTTGCGGACGAGTTATACTCTGCTTGCTTTTGCAAAAGATATTGCTGTC
TTTCAGCCACATTGACATCCCCGTTACTATGATGCTGCTTTCCTAGACTTCCCAGTAACT
GGCTTGGAGACTGCTCAAGCAAGGTCTCATCGAGTTGTTCCTTAATGGTAACATTAACAT
TCGATCTTGCTCTCAGTGAAGTCTCCTTAGCATTTGCTAAACTGATGTGTGGATGTCCTG
CTGGTCTAACTTTTCCCTCTATCTGACCACTTGAATCGAAGGGATCCCTTAATTTTGGCA
CATCCATATCATTTTTACTGCCACATAACTTAGTGCGAGCAGCAGAATCCTACTCCTTGA
GAGTGTAATGTATTTCCTGAGGAGATACAGTATCTGATATGCG
■■Homology search results ■■ -
sp_hit_id Q7TNC6
Definition sp|Q7TNC6|KI26B_MOUSE Kinesin-like protein KIF26B OS=Mus musculus
Align length 31
Score (bit) 32.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921142|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C03.
(523 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7TNC6|KI26B_MOUSE Kinesin-like protein KIF26B OS=Mus musculu... 32 1.8
sp|Q2KJY2|KI26B_HUMAN Kinesin-like protein KIF26B OS=Homo sapien... 32 1.8
sp|B0TNS0|NFUA_SHEHH Fe/S biogenesis protein nfuA OS=Shewanella ... 31 3.1
sp|O35923|BRCA2_RAT Breast cancer type 2 susceptibility protein ... 31 3.1
sp|A8FPL9|NFUA_SHESH Fe/S biogenesis protein nfuA OS=Shewanella ... 31 4.1
sp|Q6AJK1|SECA_DESPS Protein translocase subunit secA OS=Desulfo... 30 5.3
sp|A4ST19|NFUA_AERS4 Fe/S biogenesis protein nfuA OS=Aeromonas s... 30 7.0
sp|A0KF09|NFUA_AERHH Fe/S biogenesis protein nfuA OS=Aeromonas h... 30 7.0
sp|Q70LM4|LGRD_BREPA Linear gramicidin synthetase subunit D OS=B... 30 7.0
sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thal... 30 7.0
sp|Q8QZV6|F161A_MOUSE UPF0564 protein FAM161A OS=Mus musculus GN... 30 9.1

>sp|Q7TNC6|KI26B_MOUSE Kinesin-like protein KIF26B OS=Mus musculus
GN=Kif26b PE=2 SV=2
Length = 2112

Score = 32.0 bits (71), Expect = 1.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1

Query: 409 RDPFDSSGQIEGKVRPAGHPHISLANAKETS 317
R+ +S G +EGK RP G P + +A+ +TS
Sbjct: 1048 RESLNSCGFVEGKPRPMGSPRLGIASLSKTS 1078


>sp|Q2KJY2|KI26B_HUMAN Kinesin-like protein KIF26B OS=Homo sapiens
GN=KIF26B PE=1 SV=1
Length = 2108

Score = 32.0 bits (71), Expect = 1.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1

Query: 409 RDPFDSSGQIEGKVRPAGHPHISLANAKETS 317
R+ +S G +EGK RP G P + +A+ +TS
Sbjct: 1047 RESLNSCGFVEGKPRPMGSPRLGIASLSKTS 1077


>sp|B0TNS0|NFUA_SHEHH Fe/S biogenesis protein nfuA OS=Shewanella
halifaxensis (strain HAW-EB4) GN=nfuA PE=3 SV=1
Length = 192

Score = 31.2 bits (69), Expect = 3.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1

Query: 304 SNVNVTIKEQLDETLLEQSPSQLLGSLGKQHHSNGD 197
S V+VT+K+ +++ LLE PS+L G H +G+
Sbjct: 153 SMVDVTLKDGIEKQLLEMFPSELTGVKDVTEHQHGE 188


>sp|O35923|BRCA2_RAT Breast cancer type 2 susceptibility protein
homolog OS=Rattus norvegicus GN=Brca2 PE=1 SV=1
Length = 3343

Score = 31.2 bits (69), Expect = 3.1
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -1

Query: 403 PFDSSGQIEGKVRPAGH-PHISLANAKETSLRARSNVNVTIKEQLDETLLEQSPSQLLGS 227
P+++ E + +P GH P + + S ++ + KEQ L+QSP + LG+
Sbjct: 41 PYNTEHPEESEYKPQGHEPQLFKTPQRNPSYHQFASTPIMFKEQSQTLPLDQSPFKELGN 100

Query: 226 L----GKQHHS 206
+ ++HHS
Sbjct: 101 VVANSKRKHHS 111


>sp|A8FPL9|NFUA_SHESH Fe/S biogenesis protein nfuA OS=Shewanella
sediminis (strain HAW-EB3) GN=nfuA PE=3 SV=1
Length = 192

Score = 30.8 bits (68), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1

Query: 304 SNVNVTIKEQLDETLLEQSPSQLLGSLGKQHHSNGD 197
S V+VT+K+ ++ LLE+ P +L G H +GD
Sbjct: 153 SMVDVTLKDGIETQLLEKFPGELTGVKDVTEHQHGD 188


>sp|Q6AJK1|SECA_DESPS Protein translocase subunit secA
OS=Desulfotalea psychrophila GN=secA PE=3 SV=1
Length = 850

Score = 30.4 bits (67), Expect = 5.3
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1

Query: 454 TKLCGSKNDMDVPKLRDPFDSSGQIEGKVRPAGHPHISLANAKETSLRARSNVNVTIKEQ 275
TK+ GSKND + ++R +E ++P G + AK + R ++K+
Sbjct: 7 TKVFGSKNDRVLKQIRPLVTRINDLESTIKPLGDAALV---AKTVEFKERIAKGESLKDL 63

Query: 274 LDET--LLEQSPSQLLG 230
L E+ ++ ++ S++LG
Sbjct: 64 LPESFAVMREAASRVLG 80


>sp|A4ST19|NFUA_AERS4 Fe/S biogenesis protein nfuA OS=Aeromonas
salmonicida (strain A449) GN=nfuA PE=3 SV=1
Length = 192

Score = 30.0 bits (66), Expect = 7.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1

Query: 304 SNVNVTIKEQLDETLLEQSPSQLLGSLGKQHHSNGD 197
S V+ T+KE +++ LLE+ P +L G H GD
Sbjct: 153 SMVDYTLKEGIEKQLLEKFPGELNGVKDATEHQRGD 188


>sp|A0KF09|NFUA_AERHH Fe/S biogenesis protein nfuA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=nfuA PE=3 SV=1
Length = 192

Score = 30.0 bits (66), Expect = 7.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1

Query: 304 SNVNVTIKEQLDETLLEQSPSQLLGSLGKQHHSNGD 197
S V+ T+KE +++ LLE+ P +L G H GD
Sbjct: 153 SMVDYTLKEGIEKQLLEKFPGELNGVKDATEHQRGD 188


>sp|Q70LM4|LGRD_BREPA Linear gramicidin synthetase subunit D
OS=Brevibacillus parabrevis GN=lgrD PE=1 SV=1
Length = 5085

Score = 30.0 bits (66), Expect = 7.0
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -1

Query: 361 AGHPHIS--LANAKETSLRARSNVNVTIKEQLDETLLEQSPS 242
+GHP LA +ET+L A ++ +V ++ LDE LE+S S
Sbjct: 3938 SGHPSFRELLARVRETALEAYAHQDVPFEKLLDELQLERSMS 3979


>sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis
thaliana GN=ARF7 PE=1 SV=2
Length = 1164

Score = 30.0 bits (66), Expect = 7.0
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = -1

Query: 352 PHISLANAKETSLRARSNVNVTIKEQLDETLLEQSPSQLLGS---LGKQHHSNGDVNVAE 182
P +L+ ++ S++N ++Q ++ +Q QLL L Q HSN + + ++
Sbjct: 495 PPTTLSQQQQLQQLLHSSLNH--QQQQSQSQQQQQQQQLLQQQQQLQSQQHSNNNQSQSQ 552

Query: 181 RQQYLLQKQAE 149
+QQ LLQ+Q +
Sbjct: 553 QQQQLLQQQQQ 563


tr_hit_id B1T3Q7
Definition tr|B1T3Q7|B1T3Q7_9BURK Putative uncharacterized protein OS=Burkholderia ambifaria MEX-5
Align length 117
Score (bit) 34.3
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921142|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C03.
(523 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1T3Q7|B1T3Q7_9BURK Putative uncharacterized protein OS=Burkh... 34 3.9
tr|Q53PL8|Q53PL8_ORYSJ Putative uncharacterized protein OS=Oryza... 33 6.6
tr|Q2RA87|Q2RA87_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 33 6.6
tr|B8BJ93|B8BJ93_ORYSI Putative uncharacterized protein OS=Oryza... 33 6.6
tr|Q1ZXA9|Q1ZXA9_DICDI NDT80/PhoG like DNA-binding domain-contai... 33 8.6

>tr|B1T3Q7|B1T3Q7_9BURK Putative uncharacterized protein
OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_2423
PE=4 SV=1
Length = 335

Score = 34.3 bits (77), Expect = 3.9
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = -1

Query: 481 LKE*DSAARTKLCGSKNDMD-----VPKLRDPFDSSGQIEGKVRPAGHPHISLANAKETS 317
L E + +++LC D+ VPK ++ ++EG VR + P +S ++ S
Sbjct: 126 LNEFRAQVKSRLCSEVEDLKDIRIHVPKAIRDLSAANKLEGWVRASSVPDVSPLISQLAS 185

Query: 316 LRARSNVNVTIKEQLDETLLEQSPSQLLGSLGKQHHSNGDVNVAERQQYLLQKQAEY 146
L+A N +K E P+ L GS G DV++A R Y+ +++EY
Sbjct: 186 LQAE---NERLKAMAQTAKAE--PALLSGSSGGLSEERLDVSLALRFSYV--QESEY 235


>tr|Q53PL8|Q53PL8_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_031742 PE=4 SV=1
Length = 932

Score = 33.5 bits (75), Expect = 6.6
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = -1

Query: 412 LRDPFDSSGQIEGKVRPAGHPHISLANAKETSLRARSNVNVTIKEQLDETLLEQSPSQLL 233
+R P DS ++ ++ A P + A L + ++ ++ +D+T + QS SQ +
Sbjct: 233 IRSPKDSPTNVDRHIQVAAEPSL----ATSADLLGSNTGTISEQDMIDDTTMVQSQSQGV 288

Query: 232 GSLGKQHHSNGD 197
+ H++NGD
Sbjct: 289 KNPNTLHYNNGD 300


>tr|Q2RA87|Q2RA87_ORYSJ Expressed protein OS=Oryza sativa subsp.
japonica GN=Os11g0160700 PE=4 SV=1
Length = 951

Score = 33.5 bits (75), Expect = 6.6
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = -1

Query: 412 LRDPFDSSGQIEGKVRPAGHPHISLANAKETSLRARSNVNVTIKEQLDETLLEQSPSQLL 233
+R P DS ++ ++ A P + A L + ++ ++ +D+T + QS SQ +
Sbjct: 233 IRSPKDSPTNVDRHIQVAAEPSL----ATSADLLGSNTGTISEQDMIDDTTMVQSQSQGV 288

Query: 232 GSLGKQHHSNGD 197
+ H++NGD
Sbjct: 289 KNPNTLHYNNGD 300


>tr|B8BJ93|B8BJ93_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35213 PE=4 SV=1
Length = 951

Score = 33.5 bits (75), Expect = 6.6
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = -1

Query: 412 LRDPFDSSGQIEGKVRPAGHPHISLANAKETSLRARSNVNVTIKEQLDETLLEQSPSQLL 233
+R P DS ++ ++ A P + A L + ++ ++ +D+T + QS SQ +
Sbjct: 233 IRSPKDSPTNVDRHIQVAAEPSL----ATSADLLGSNTGTISEQDMIDDTTMVQSQSQGV 288

Query: 232 GSLGKQHHSNGD 197
+ H++NGD
Sbjct: 289 KNPNTLHYNNGD 300


>tr|Q1ZXA9|Q1ZXA9_DICDI NDT80/PhoG like DNA-binding
domain-containing protein OS=Dictyostelium discoideum
GN=DDB_0232147 PE=4 SV=1
Length = 1133

Score = 33.1 bits (74), Expect = 8.6
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -1

Query: 442 GSKNDMDVPKL-RDPFDSSGQIEGKVRPAGHPHISLANAKETSLRARSNVNVTIKEQLDE 266
GS N+ D+ ++ R+ + Q E + + + + N S SN N I +
Sbjct: 13 GSGNNQDIDEIKREQMSNFDQFEDGLN---NNNSNNNNNNNNSNNNNSNNNENINRKTGS 69

Query: 265 TLLEQSPSQLLGSLGKQHHSNGDVNVAERQQYLLQK 158
TLL S SQL S G+ S V ++++Y++ K
Sbjct: 70 TLLSSSTSQLNSSSGQISFSKDAVAPTKKRRYIVDK 105