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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921143
Clone id YMU001_000146_C04
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACTCCAAGCAACAAGAAGCTCATTCTATGCAGAAATTCTTACAGCCTTTTCTACAACAAA
AGTGACTGGACATCATCCTTAAATTAACAGATATGAACTTTTGGATCTGAACGTCAGCTT
CCATCCAGGCCGTAATTCTTCACCTTGAAGTTGGTATTTTGCCTTCTGTAGTCAAAATGA
CGTAGTTCTTGTACCATAATGTCTTTACCTTCGTTGTGGTGACTTATGGAGCTTTATGAA
TTTTTTTCTTTATTGACTTGCACAGCACATCTGGGAGTCACCAAAGAAAGCTGTTTCTGT
GACGTTTGAAATGTGGCGCTAACCAGCAGTTTGATCGTGTTCATACTTCAGGCTTTTTTT
GATCAGGTATTATCTCGAGTTTGTGAATTCCCAAGCACTTTGTGTATATCCTCAAATGAT
ACAGTAGCTGATCCTCTCTTCTTTGCACCTTGTTGTGAAGGATGTGGGCACCATCCAGCC
ATGTAGATAACCTGGAAGGTTGCAGAAATGCCATCACCATCTCCAAACATTGCTTCATAT
GCTGCAGCTGTGGCTAAAGCTGTCTCCTTTCGCAATGACT
■■Homology search results ■■ -
sp_hit_id O80543
Definition sp|O80543|Y1280_ARATH Uncharacterized protein At1g22800 OS=Arabidopsis thaliana
Align length 48
Score (bit) 57.4
E-value 5.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921143|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C04.
         (580 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80543|Y1280_ARATH Uncharacterized protein At1g22800 OS=Arabi...    57   5e-08
sp|A3KP37|CT007_DANRE Probable methyltransferase C20orf7 homolog...    57   9e-08
sp|Q54JW0|CT007_DICDI Probable methyltransferase DDB_G0287769, m...    48   3e-05
sp|Q5RBS1|CT007_PONAB Probable methyltransferase C20orf7 homolog...    45   2e-04
sp|Q5TEU4|CT007_HUMAN Probable methyltransferase C20orf7, mitoch...    45   2e-04
sp|B2GV71|CT007_RAT Probable methyltransferase C20orf7 homolog, ...    44   4e-04
sp|A2APY7|CT007_MOUSE Probable methyltransferase C20orf7 homolog...    44   4e-04
sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=...    31   3.9  
sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 O...    31   3.9  
sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 O...    31   3.9  
sp|Q5JDW9|PGK2_PYRKO 2-phosphoglycerate kinase OS=Pyrococcus kod...    31   5.1  

>sp|O80543|Y1280_ARATH Uncharacterized protein At1g22800
           OS=Arabidopsis thaliana GN=At1g22800 PE=2 SV=2
          Length = 355

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 30/48 (62%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLG 390
           MF   DG I ATFQVIYM GW  H S   AK+RGSATVSF D+ K  G
Sbjct: 305 MFATEDGTIPATFQVIYMTGWREHSSHPQAKRRGSATVSFTDLQKQFG 352


>sp|A3KP37|CT007_DANRE Probable methyltransferase C20orf7 homolog,
           mitochondrial OS=Danio rerio GN=zgc:162919 PE=2 SV=1
          Length = 321

 Score = 56.6 bits (135), Expect = 9e-08
 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKV 396
           M+G+ DG + ATFQ++YM GW PH SQ    KRGSA VSF D+ K+
Sbjct: 269 MYGNEDGSVPATFQILYMIGWKPHDSQAKPAKRGSANVSFADLSKI 314


>sp|Q54JW0|CT007_DICDI Probable methyltransferase DDB_G0287769,
           mitochondrial OS=Dictyostelium discoideum
           GN=DDB_G0287769 PE=3 SV=1
          Length = 436

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = -3

Query: 521 DGDGISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDI 405
           D + I ATFQ+IY+ GW PH SQQ   +RGSA   F +I
Sbjct: 300 DNNSIPATFQIIYLIGWAPHESQQKPLQRGSAKKHFSEI 338


>sp|Q5RBS1|CT007_PONAB Probable methyltransferase C20orf7 homolog,
           mitochondrial OS=Pongo abelii PE=2 SV=1
          Length = 345

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKV 396
           M+ + DG + AT+Q+ YM GW  H SQ    +RGSATVSF ++ K+
Sbjct: 289 MYRNEDGSVPATYQIYYMIGWKYHESQARPAERGSATVSFGELGKI 334


>sp|Q5TEU4|CT007_HUMAN Probable methyltransferase C20orf7,
           mitochondrial OS=Homo sapiens GN=C20orf7 PE=1 SV=1
          Length = 345

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKV 396
           M+ + DG + AT+Q+ YM GW  H SQ    +RGSATVSF ++ K+
Sbjct: 289 MYRNEDGSVPATYQIYYMIGWKYHESQARPAERGSATVSFGELGKI 334


>sp|B2GV71|CT007_RAT Probable methyltransferase C20orf7 homolog,
           mitochondrial OS=Rattus norvegicus PE=2 SV=1
          Length = 343

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKV 396
           M+ + DG I AT+Q+ +M GW  H SQ    +RGSATVSF D+ ++
Sbjct: 289 MYSNEDGSIPATYQIYHMIGWKYHDSQARPAERGSATVSFGDLARL 334


>sp|A2APY7|CT007_MOUSE Probable methyltransferase C20orf7 homolog,
           mitochondrial OS=Mus musculus PE=2 SV=1
          Length = 343

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKV 396
           M+ + DG I ATFQ+ +M GW  H SQ    +RGSATVSF ++ K+
Sbjct: 289 MYRNEDGSIPATFQIYHMIGWKYHDSQARPAERGSATVSFGELAKL 334


>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19
            OS=Rattus norvegicus GN=Usp19 PE=1 SV=1
          Length = 1357

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -1

Query: 355  KPEV*TRSNCWLAPHFKRHRNS----FLW*LPDVLCKSIKK 245
            +PEV      W  P  K+HR +     LW LP+VL   +K+
Sbjct: 1108 RPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKR 1148


>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus
            musculus GN=Usp19 PE=2 SV=1
          Length = 1360

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -1

Query: 355  KPEV*TRSNCWLAPHFKRHRNS----FLW*LPDVLCKSIKK 245
            +PEV      W  P  K+HR +     LW LP+VL   +K+
Sbjct: 1111 RPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKR 1151


>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19
            OS=Homo sapiens GN=USP19 PE=1 SV=2
          Length = 1318

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -1

Query: 355  KPEV*TRSNCWLAPHFKRHRNS----FLW*LPDVLCKSIKK 245
            +PEV      W  P  K+HR +     LW LP+VL   +K+
Sbjct: 1069 RPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKR 1109
tr_hit_id A9TBA9
Definition tr|A9TBA9|A9TBA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 60
Score (bit) 72.4
E-value 2.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921143|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C04.
         (580 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TBA9|A9TBA9_PHYPA Predicted protein (Fragment) OS=Physcomit...    72   2e-11
tr|Q0IPH1|Q0IPH1_ORYSJ Os12g0203100 protein OS=Oryza sativa subs...    69   2e-10
tr|B8BNL1|B8BNL1_ORYSI Putative uncharacterized protein OS=Oryza...    69   2e-10
tr|A6N1H2|A6N1H2_ORYSI Sam-dependent methyltransferase (Fragment...    69   2e-10
tr|A3CFT9|A3CFT9_ORYSJ Putative uncharacterized protein OS=Oryza...    69   2e-10
tr|B6T632|B6T632_MAIZE Putative uncharacterized protein OS=Zea m...    67   5e-10
tr|A7PQ00|A7PQ00_VITVI Chromosome chr18 scaffold_24, whole genom...    64   6e-09
tr|B7ZUA2|B7ZUA2_XENTR Putative uncharacterized protein LOC54915...    58   3e-07
tr|Q0WSC3|Q0WSC3_ARATH Putative uncharacterized protein At1g2280...    57   6e-07
tr|B8JKQ0|B8JKQ0_DANRE Novel protein (Zgc:162919) OS=Danio rerio...    57   1e-06
tr|A4SB72|A4SB72_OSTLU Predicted protein (Fragment) OS=Ostreococ...    56   2e-06
tr|Q178L8|Q178L8_AEDAE Putative uncharacterized protein OS=Aedes...    55   2e-06
tr|B6PV56|B6PV56_BRAFL Putative uncharacterized protein OS=Branc...    53   1e-05
tr|B6NB09|B6NB09_BRAFL Putative uncharacterized protein OS=Branc...    53   1e-05
tr|Q4TBA1|Q4TBA1_TETNG Chromosome undetermined SCAF7170, whole g...    53   1e-05
tr|B0XK70|B0XK70_CULQU Putative uncharacterized protein OS=Culex...    51   4e-05
tr|Q00VY0|Q00VY0_OSTTA Predicted methyltransferase (ISS) (Fragme...    50   7e-05
tr|A9UPH2|A9UPH2_MONBE Predicted protein OS=Monosiga brevicollis...    50   1e-04
tr|B6JAC8|B6JAC8_OLICO Methyltransferase OS=Oligotropha carboxid...    49   2e-04
tr|A8HUC3|A8HUC3_CHLRE Predicted protein (Fragment) OS=Chlamydom...    49   2e-04
tr|Q07VC3|Q07VC3_RHOP5 Methyltransferase type 11 OS=Rhodopseudom...    49   3e-04
tr|A3UGI6|A3UGI6_9RHOB Putative uncharacterized protein OS=Ocean...    49   3e-04
tr|Q7QGP3|Q7QGP3_ANOGA AGAP010842-PA OS=Anopheles gambiae GN=AGA...    48   3e-04
tr|A5ETE6|A5ETE6_BRASB Putative uncharacterized protein OS=Brady...    48   4e-04
tr|Q0G7Z3|Q0G7Z3_9RHIZ Methyltransferase OS=Fulvimarina pelagi H...    48   4e-04
tr|Q89XU8|Q89XU8_BRAJA Methyltransferase OS=Bradyrhizobium japon...    47   6e-04
tr|Q6NC77|Q6NC77_RHOPA Putative uncharacterized protein OS=Rhodo...    47   6e-04
tr|B3QBK5|B3QBK5_RHOPT Methyltransferase type 11 OS=Rhodopseudom...    47   6e-04
tr|Q2J470|Q2J470_RHOP2 Putative uncharacterized protein OS=Rhodo...    47   8e-04
tr|A4YKU4|A4YKU4_BRASO Putative uncharacterized protein OS=Brady...    47   8e-04

>tr|A9TBA9|A9TBA9_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_143044 PE=4 SV=1
          Length = 340

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLGNSQTRDNT*SKK 354
           +FG+ DG I ATFQVIYMAGW P  SQQ  K+RGSATVSFED+HK     ++ D + S+K
Sbjct: 244 LFGESDGTIPATFQVIYMAGWSPDVSQQRPKRRGSATVSFEDLHKAFTPKESSDGSGSQK 303


>tr|Q0IPH1|Q0IPH1_ORYSJ Os12g0203100 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0203100 PE=4 SV=1
          Length = 303

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLGNSQ 381
           MFG  DG + ATFQVIYM GW  HPSQQ AK+RGSATVSF D+ K  G++Q
Sbjct: 252 MFGLEDGTVPATFQVIYMTGWKEHPSQQKAKRRGSATVSFSDLQKQFGSNQ 302


>tr|B8BNL1|B8BNL1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37783 PE=4 SV=1
          Length = 347

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLGNSQ 381
           MFG  DG + ATFQVIYM GW  HPSQQ AK+RGSAT+SF D+ K  G+SQ
Sbjct: 296 MFGLEDGTVPATFQVIYMTGWKEHPSQQKAKRRGSATLSFSDLQKQFGSSQ 346


>tr|A6N1H2|A6N1H2_ORYSI Sam-dependent methyltransferase (Fragment)
           OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 109

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLGNSQ 381
           MFG  DG + ATFQVIYM GW  HPSQQ AK+RGSAT+SF D+ K  G+SQ
Sbjct: 58  MFGLEDGTVPATFQVIYMTGWKEHPSQQKAKRRGSATLSFSDLQKQFGSSQ 108


>tr|A3CFT9|A3CFT9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_034161 PE=4 SV=1
          Length = 303

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLGNSQ 381
           MFG  DG + ATFQVIYM GW  HPSQQ AK+RGSATVSF D+ K  G++Q
Sbjct: 252 MFGLEDGTVPATFQVIYMTGWKEHPSQQKAKRRGSATVSFSDLQKQFGSNQ 302


>tr|B6T632|B6T632_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 343

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLGNSQ 381
           MFG  DG I ATFQVIYM GW  HPSQQ AK+RGSAT+SF DI K  G S+
Sbjct: 292 MFGLEDGSIPATFQVIYMTGWREHPSQQKAKRRGSATISFGDIQKQFGPSE 342


>tr|A7PQ00|A7PQ00_VITVI Chromosome chr18 scaffold_24, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021858001
           PE=4 SV=1
          Length = 339

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLGN 387
           MF   DG I ATFQVIYM GW  H SQQ AK+RGSATVSF+DI K  G+
Sbjct: 289 MFAGEDGTIPATFQVIYMTGWREHSSQQKAKRRGSATVSFQDIQKQFGS 337


>tr|B7ZUA2|B7ZUA2_XENTR Putative uncharacterized protein LOC549152
           OS=Xenopus tropicalis GN=LOC549152 PE=2 SV=1
          Length = 390

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKV 396
           M+G+ DG + ATFQV YM GW PH SQ    KRGSATVSF D+ KV
Sbjct: 333 MYGEEDGTVPATFQVYYMIGWKPHESQAKPAKRGSATVSFGDLKKV 378


>tr|Q0WSC3|Q0WSC3_ARATH Putative uncharacterized protein At1g22800
           OS=Arabidopsis thaliana GN=At1g22800 PE=2 SV=1
          Length = 355

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/48 (62%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKVLG 390
           MF   DG I ATFQVIYM GW  H S   AK+RGSATVSF D+ K  G
Sbjct: 305 MFATEDGTIPATFQVIYMTGWREHSSHPQAKRRGSATVSFTDLQKQFG 352


>tr|B8JKQ0|B8JKQ0_DANRE Novel protein (Zgc:162919) OS=Danio rerio
           GN=DKEY-210M15.2 PE=4 SV=1
          Length = 322

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = -3

Query: 530 MFGDGDG-ISATFQVIYMAGWCPHPSQQGAKKRGSATVSFEDIHKV 396
           M+G+ DG + ATFQ++YM GW PH SQ    KRGSA VSF D+ K+
Sbjct: 270 MYGNEDGSVPATFQILYMIGWKPHDSQAKPAKRGSANVSFADLSKI 315