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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921144
Clone id YMU001_000146_C05
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTAATCAAAGACATTTGATTGCAAGGCAAGCGGTCTTAAGAGCGTTTGCCTCTCTTAG
GAAGTGGAGAATTTTTGGCAGGGCAATGTCCGTTGATGTGAAGACTGCTGTGTCAATGAT
TGGCGCATGCTCCATTCTCCACAACATGTTATTGCACAAGGGGGAGCCCCTTGATCTTGA
GGAGGATCATCTACAAGATTACAGTATGCATGATTCTTTGATTCAATACGACAAGGACTA
TGTCGAAGATGAGGAAGGATCTTCAGAAGATCACATGTTGGCTCTGCACATTAGAGGTGC
CCTTGCAATGGGGATGGAACAAAATGGGCAGAGCTAGATGATGATTTATTGAAAGATTGG
TGTCTAAAGGCTACGCGGACATTGTTTTGAGGCAATGCTCGAATGCAATTCTGCACTTTT
TTTGGCCATTATGTCTTCAGTGTCGGGTGATCACATGTTGGCTTTGACATTAGGGCTGCC
CTTGCAATGGGGATGGAATCAAATGGGCATTGCGTTG
■■Homology search results ■■ -
sp_hit_id O51401
Definition sp|O51401|ALF_BORBU Fructose-bisphosphate aldolase OS=Borrelia burgdorferi
Align length 78
Score (bit) 30.8
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921144|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C05.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O51401|ALF_BORBU Fructose-bisphosphate aldolase OS=Borrelia b...    31   4.0  
sp|Q2YBS2|SYFA_NITMU Phenylalanyl-tRNA synthetase alpha chain OS...    30   5.2  
sp|Q95V31|RS16_SPOFR 40S ribosomal protein S16 OS=Spodoptera fru...    30   5.2  
sp|Q5HZE8|TM59L_RAT Transmembrane protein 59-like OS=Rattus norv...    30   8.7  

>sp|O51401|ALF_BORBU Fructose-bisphosphate aldolase OS=Borrelia
           burgdorferi GN=fba PE=1 SV=1
          Length = 359

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
 Frame = +2

Query: 71  IFGRAMSVDVKTAVSMIGACS---ILHNMLLHKGEPLDLEEDHLQDYSMH--DSLIQY-D 232
           I G+ + ++    VS++GA S    +H M  H G P+ L  DH     +   + L++Y +
Sbjct: 68  ISGKGLKMEKPQGVSIVGAISGAMHVHLMAEHYGVPVVLHTDHCAKNLLPWVEGLLEYGE 127

Query: 233 KDYVEDEEGSSEDHMLAL 286
           K Y + ++     HML L
Sbjct: 128 KYYSQHKKPLFSSHMLDL 145


>sp|Q2YBS2|SYFA_NITMU Phenylalanyl-tRNA synthetase alpha chain
           OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
           11849) GN=pheS PE=3 SV=1
          Length = 344

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 209 HDSLIQYDKDYVEDEEGSSEDHMLALHIRGALAMGMEQN 325
           H +   +D  YV+DE G + +H+L  H        ME N
Sbjct: 149 HPARAMHDTFYVDDENGGASEHLLRTHTSPVQIRYMESN 187


>sp|Q95V31|RS16_SPOFR 40S ribosomal protein S16 OS=Spodoptera
           frugiperda GN=RpS16 PE=2 SV=1
          Length = 151

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +2

Query: 68  RIFGRAMSVDVKTAVSMIGACSILHNMLLHKGEPLDLEEDHLQDYSMHDSLIQYDKD 238
           ++FGR      K   + +  C   H +L   G PLDL E  L  Y + + ++   K+
Sbjct: 16  QVFGR------KKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 66


>sp|Q5HZE8|TM59L_RAT Transmembrane protein 59-like OS=Rattus
           norvegicus GN=Tmem59l PE=2 SV=2
          Length = 331

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = -3

Query: 317 PSPLQGHL*CAEPTCDLLKILPHLRHSPCRIESKNHAYCNLVDDPPQDQGAPPCAITCC 141
           P  L+ H+    P   + +  PHL+ S  ++ES++    + +    +  G P   + CC
Sbjct: 204 PKALEVHMDPMSPLEKVRRAKPHLKTSKAKVESEDQQESDFLSCMSRRSGLPRWVLFCC 262
tr_hit_id A7P9L9
Definition tr|A7P9L9|A7P9L9_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera
Align length 68
Score (bit) 52.4
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921144|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C05.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P9L9|A7P9L9_VITVI Chromosome chr3 scaffold_8, whole genome ...    52   1e-05
tr|Q7EZN4|Q7EZN4_ORYSJ OJ1005_B10.22 protein OS=Oryza sativa sub...    45   0.002
tr|A2ZTW0|A2ZTW0_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.002
tr|Q60F07|Q60F07_ORYSJ Putative uncharacterized protein Oj1111_A...    45   0.002
tr|A3BR12|A3BR12_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.002
tr|B4LW51|B4LW51_DROVI GJ24230 OS=Drosophila virilis GN=GJ24230 ...    44   0.005
tr|Q9LJA7|Q9LJA7_ARATH Similarity to En/Spm-like transposon prot...    44   0.006
tr|A7Q558|A7Q558_VITVI Chromosome undetermined scaffold_52, whol...    42   0.024
tr|Q2QW29|Q2QW29_ORYSJ Transposon protein, putative, CACTA, En/S...    41   0.031
tr|A5BND9|A5BND9_VITVI Putative uncharacterized protein OS=Vitis...    41   0.041
tr|Q0DDF8|Q0DDF8_ORYSJ Os06g0226000 protein (Fragment) OS=Oryza ...    40   0.053
tr|A7PNF3|A7PNF3_VITVI Chromosome chr1 scaffold_22, whole genome...    40   0.053
tr|Q65WX7|Q65WX7_ORYSJ Putative uncharacterized protein P0683B12...    40   0.070
tr|B8B6L9|B8B6L9_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.070
tr|A3B0M6|A3B0M6_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.070
tr|A2Y145|A2Y145_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.070
tr|B6THQ7|B6THQ7_MAIZE Retrotransposon protein OS=Zea mays PE=2 ...    40   0.091
tr|B4J3C5|B4J3C5_DROGR GH14797 OS=Drosophila grimshawi GN=GH1479...    39   0.15 
tr|Q5W6P9|Q5W6P9_ORYSJ Putative polyprotein OS=Oryza sativa subs...    39   0.20 
tr|Q5W652|Q5W652_ORYSJ Putative uncharacterized protein OSJNBb00...    39   0.20 
tr|Q2QRE9|Q2QRE9_ORYSJ Transposon protein, putative, CACTA, En/S...    39   0.20 
tr|Q2QMM6|Q2QMM6_ORYSJ Transposon protein, putative, CACTA, En/S...    39   0.20 
tr|Q7XUR9|Q7XUR9_ORYSJ OSJNBa0084K11.21 protein (OSJNBb0078D11.1...    38   0.26 
tr|B6SVG3|B6SVG3_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.35 
tr|B4KYV4|B4KYV4_DROMO GI11852 OS=Drosophila mojavensis GN=GI118...    38   0.35 
tr|B4F975|B4F975_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.45 
tr|B4LDM2|B4LDM2_DROVI GJ13550 OS=Drosophila virilis GN=GJ13550 ...    37   0.45 
tr|Q0J577|Q0J577_ORYSJ Os08g0459400 protein OS=Oryza sativa subs...    37   0.59 
tr|A7QFV1|A7QFV1_VITVI Chromosome undetermined scaffold_89, whol...    37   0.59 
tr|Q75K46|Q75K46_ORYSJ Putative uncharacterized protein OSJNBb01...    37   0.77 

>tr|A7P9L9|A7P9L9_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036618001
           PE=4 SV=1
          Length = 395

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 28/68 (41%), Positives = 41/68 (60%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLRKWRIFGRAMSVDVKTAVSMIGACSILHNMLLHKGEPLDLE 181
           FN  H +   + LRA ASL+ W +  + +  + K AV+ IG+C+ILHN+LL + +   L 
Sbjct: 277 FNSAHHLMHISALRAIASLKDWGVLRQTIEGEFKMAVAYIGSCAILHNVLLMRDDYSAL- 335

Query: 182 EDHLQDYS 205
            D L DYS
Sbjct: 336 SDGLGDYS 343


>tr|Q7EZN4|Q7EZN4_ORYSJ OJ1005_B10.22 protein OS=Oryza sativa subsp.
           japonica GN=OJ1005_B10.22 PE=4 SV=1
          Length = 305

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHK--GEPL 172
           FN RH  AR  V R+F  L+ +W I        +KT   +I AC++LHN++L K   +P 
Sbjct: 192 FNMRHASARNIVERSFGRLKGRWAILRSPSYFPIKTQCRIIMACALLHNLILQKMSSDPF 251

Query: 173 -DLEEDHLQD 199
            D +ED  +D
Sbjct: 252 EDEDEDEDED 261


>tr|A2ZTW0|A2ZTW0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001982 PE=4 SV=1
          Length = 598

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHK--GEPL 172
           FN RH  AR  V R+F  L+ +W I        +KT   +I AC++LHN++L K   +P 
Sbjct: 174 FNMRHASARNIVERSFGRLKGRWAILRSPSYFPIKTQCRIIMACALLHNLILQKMSSDPF 233

Query: 173 -DLEEDHLQD 199
            D +ED  +D
Sbjct: 234 EDEDEDEDED 243


>tr|Q60F07|Q60F07_ORYSJ Putative uncharacterized protein
           Oj1111_A10.6 OS=Oryza sativa subsp. japonica
           GN=Oj1111_A10.6 PE=4 SV=1
          Length = 468

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   NQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHKGEPLDLE 181
           N R   AR A + AF  LR +WR   R   V +    +M+GAC +LHN+    G  LD +
Sbjct: 355 NARVADARAAAVGAFRRLRARWRCLRRRAEVKLPELPNMLGACCVLHNLCERSGGELDAD 414

Query: 182 EDHLQDYSMHDSLIQYDKDYVEDEEGSSEDHMLALHIRGALAMGMEQNGQS 334
                   +HD L+    D V    G++     A  +R  +A G+   G +
Sbjct: 415 -------LLHDELVD---DGVVAGGGNTVRSAAAEQVRDRIAHGLLHAGNT 455


>tr|A3BR12|A3BR12_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_025484 PE=4 SV=1
          Length = 393

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   NQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHKGEPLDLE 181
           N R   AR A + AF  LR +WR   R   V +    +M+GAC +LHN+    G  LD +
Sbjct: 280 NARVADARAAAVGAFRRLRARWRCLRRRAEVKLPELPNMLGACCVLHNLCERSGGELDAD 339

Query: 182 EDHLQDYSMHDSLIQYDKDYVEDEEGSSEDHMLALHIRGALAMGMEQNGQS 334
                   +HD L+    D V    G++     A  +R  +A G+   G +
Sbjct: 340 -------LLHDELVD---DGVVAGGGNTVRSAAAEQVRDRIAHGLLHAGNT 380


>tr|B4LW51|B4LW51_DROVI GJ24230 OS=Drosophila virilis GN=GJ24230
           PE=4 SV=1
          Length = 347

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHKGEPLDL 178
           FN+RH  AR  V R    L+ ++    RA+  D +   +++  C  LHN+   +  PLD 
Sbjct: 253 FNERHAAARSVVQRTINLLKSRFGCMQRALMYDARFVANVVNVCCALHNICRRRRTPLDE 312

Query: 179 EEDHLQDYSMHDSLIQYDKD 238
            E   +     D  I+Y+ D
Sbjct: 313 REMLHEQMDEFDGEIEYEDD 332


>tr|Q9LJA7|Q9LJA7_ARATH Similarity to En/Spm-like transposon protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 329

 Score = 43.5 bits (101), Expect = 0.006
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHKGEP-LD 175
           FN RH + R  + R F   + KWRI       ++ T   ++ A   LHN +   G P LD
Sbjct: 221 FNWRHSLLRCVIERTFGVWKGKWRIMQDRAWYNIVTTRKIMVATMALHNFVWKLGIPDLD 280

Query: 176 LEEDHLQDYSMHDSLIQYDKDYVEDEEGSSEDHM 277
            + D +QD   H +L   D+   +D  GS + HM
Sbjct: 281 FDIDWMQDNDHHPTLDDEDETVEQDMTGSRQ-HM 313


>tr|A7Q558|A7Q558_VITVI Chromosome undetermined scaffold_52, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00030784001 PE=4 SV=1
          Length = 600

 Score = 41.6 bits (96), Expect = 0.024
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHK--GEPL 172
           FN +H IAR  + R F  L+ +W I        VKT   +I AC +LHN++  +   +PL
Sbjct: 9   FNIKHSIARNVIERCFGVLKLRWAILRSVCFYIVKTQCKLILACCLLHNLIKREIFVDPL 68

Query: 173 DLEEDHLQDYSM 208
           + E D +QD+ +
Sbjct: 69  EQELD-VQDHQV 79


>tr|Q2QW29|Q2QW29_ORYSJ Transposon protein, putative, CACTA, En/Spm
           sub-class (Putative uncharacterized protein) OS=Oryza
           sativa subsp. japonica GN=LOC_Os12g10770 PE=4 SV=1
          Length = 228

 Score = 41.2 bits (95), Expect = 0.031
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLRKWRIFGRAMS-VDVKTAVSMIGACSILHNMLLHKG--EPL 172
           FN RH   R  V RAF SL++W+I   A       + V ++ AC I+ N ++  G  + +
Sbjct: 122 FNLRHSSLRVTVERAFGSLKRWKILDDATPFFPYPSQVDIVVACCIIQNWIIEDGGDDFI 181

Query: 173 DLEEDHLQDYSMHDSLIQYDKDYVEDEEGSSEDHMLALHIRGALAMGMEQNGQS 334
             EE+ + +Y           +Y     G + +H   +  R   A  M ++ Q+
Sbjct: 182 ISEEEWIANY-----------NYATSRSGQASEHAYMVQFRQDTADQMWEDRQA 224


>tr|A5BND9|A5BND9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_027369 PE=4 SV=1
          Length = 579

 Score = 40.8 bits (94), Expect = 0.041
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
 Frame = +2

Query: 2   FNQRHLIARQAVLRAFASLR-KWRIFGRAMSVDVKTAVSMIGACSILHNMLLHK--GEPL 172
           FN +H  AR  + R F  L+ +W I        +KT   +I AC ++HN++  +   +PL
Sbjct: 287 FNMKHSAARNVIERCFGLLKLRWAILRSPCFYPIKTQCKIILACCLIHNLIKREMXVDPL 346

Query: 173 DLEEDHLQDYSMHDSLI 223
           + E D +QD+ +  +LI
Sbjct: 347 EQELD-VQDHQVLYNLI 362