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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921147
Clone id YMU001_000146_C08
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAGTACCTGCGCTTTTGTTCGTCATTCTTTGAGCTTGGGCTCGTCTCACTGCCTGAATAG
GTATTACTGTCTCATTTTCTGACCCTTCACTGGAAGGCACTGCTTCCAGCATGTACAAGG
TAGTTTGTTCTCCTTTCTCGGGTTCTTAGGGCAATCAGGAATTAAATGAATAATTCCACA
CTCGGTGCAATATGCGTTGACTCTAATGATTTCATCATGAGGACAGTCTCTTAGCCAATG
GTCTCCACCACACTTGTAGAAGGGTCCCTTATGCTGTAGAGGTGCTCCTTGAGCTCCTCT
GTGTTGGTATGCATGTCTCTGCTCGCCCATGCCGACGTTGGCTATGAACAACAATGTTCG
TTCATCCAAGCTATATCTTCCTTCTCCTGCTGCCTGTGCAGCTGTTGGTAGTCATGCACC
TCATATCATGCTCCATGGTTCTGGCGTTGAGGGTTCTTCTGTGGATAATAGGCAGGATTT
GCTGCATCTCCATTG
■■Homology search results ■■ -
sp_hit_id P36627
Definition sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe
Align length 56
Score (bit) 36.2
E-value 0.086
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921147|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C08.
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homol...    36   0.086
sp|P43064|EFG1_CANAL Enhanced filamentous growth protein OS=Cand...    34   0.42 
sp|P03341|GAG_BAEVM Gag polyprotein OS=Baboon endogenous virus (...    31   3.6  
sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogas...    30   6.0  
sp|P10262|GAG_FLV Gag polyprotein OS=Feline leukemia virus GN=ga...    30   6.1  
sp|P15671|NCAP_I79A7 Nucleoprotein OS=Influenza A virus (strain ...    30   8.0  

>sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog
           OS=Schizosaccharomyces pombe GN=byr3 PE=2 SV=1
          Length = 179

 Score = 36.2 bits (82), Expect = 0.086
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -1

Query: 303 HRGAQGAPLQHKGPFYKCG-GDHWLRDCPHDEIIRVNAYCTECGII-HLIPDCPKN 142
           H+ ++    Q +   Y CG   H +RDCP     R  A C +CG + H+  DC  N
Sbjct: 46  HKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTN 101


>sp|P43064|EFG1_CANAL Enhanced filamentous growth protein OS=Candida
           albicans GN=EFG1 PE=3 SV=1
          Length = 552

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -2

Query: 491 GDAANPAYYPQKNPQRQ-NHGA*YEVHDYQQLHRQQEKEDIAWMNEHCCS*PTSAWASRD 315
           G AAN +YYP    Q+Q N+ + Y     QQ  +QQ+       ++   S P+    +R 
Sbjct: 457 GGAANSSYYPNYYQQQQPNYASSYPYQQQQQKQQQQQPNQQQQSDQQQTSTPSGGAGTRS 516

Query: 314 MHTNTE 297
           +H + +
Sbjct: 517 VHQSPQ 522


>sp|P03341|GAG_BAEVM Gag polyprotein OS=Baboon endogenous virus
           (strain M7) GN=gag PE=3 SV=4
          Length = 537

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -1

Query: 195 AYCTECGIIHLIPDCPKNPRKENK 124
           AYC E G  H I DCPK PR + K
Sbjct: 504 AYCKERG--HWIKDCPKRPRDQKK 525


>sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogaster
           GN=Hmx PE=2 SV=3
          Length = 592

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = -2

Query: 479 NPAYYPQKNPQRQNHGA*YEVHDYQQLHRQQEKEDIAWMNEHCCS*PTSAWASRDMHTNT 300
           +P Y+P  + Q+Q     ++ H  QQ H QQ+++     + H  + PTS+ +S    + T
Sbjct: 358 HPLYHPLGSQQQQQQQQQHQQHPQQQQHPQQQQQ----QHPHQPTTPTSSSSSGGGSSLT 413

Query: 299 EELKEHL 279
                HL
Sbjct: 414 HHPHPHL 420


>sp|P10262|GAG_FLV Gag polyprotein OS=Feline leukemia virus GN=gag
           PE=3 SV=1
          Length = 580

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 195 AYCTECGIIHLIPDCPKNPRKE 130
           AYC E G  H + DCPK PRK+
Sbjct: 550 AYCKEKG--HWVRDCPKRPRKK 569


>sp|P15671|NCAP_I79A7 Nucleoprotein OS=Influenza A virus (strain
           A/Grey teal/Australia/2/1979 H4N4) GN=NP PE=3 SV=2
          Length = 498

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
 Frame = -1

Query: 384 EGRYSLDERTLLFIANVGMGEQRHAY--QHRGAQGAPLQHKGPFYKCGGDHWLRD---CP 220
           EGR   +  T+  +      E+R+ Y  +H  A   P +  GP Y+     W+R+   C 
Sbjct: 53  EGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGGPIYRRRDGKWIRELILCD 112

Query: 219 HDEIIRV-----NAYCTECGIIHLI 160
            +EI R+     N      G+ HL+
Sbjct: 113 KEEIRRIWRQANNGEDATAGLTHLM 137
tr_hit_id Q2R394
Definition tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 37.0
E-value 0.52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921147|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C08.
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subs...    37   0.52 
tr|B8BKV6|B8BKV6_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.52 
tr|A5BQA7|A5BQA7_VITVI Putative uncharacterized protein OS=Vitis...    36   1.2  
tr|A3CBX1|A3CBX1_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.0  
tr|B2WP59|B2WP59_PYRTR Putative uncharacterized protein OS=Pyren...    34   3.4  
tr|Q59X67|Q59X67_CANAL Positive regulator of filamentous growth ...    34   4.3  
tr|B8P410|B8P410_9APHY Predicted protein OS=Postia placenta Mad-...    34   4.3  
tr|Q24ZS6|Q24ZS6_DESHY Putative uncharacterized protein OS=Desul...    34   4.4  
tr|B3NIQ7|B3NIQ7_DROER GG16133 OS=Drosophila erecta GN=GG16133 P...    34   4.4  
tr|Q1HA65|Q1HA65_POLMI Vasa OS=Polyandrocarpa misakiensis GN=PmV...    33   5.7  
tr|B0EA52|B0EA52_ENTDI Zinc finger protein cchc domain containin...    33   5.7  
tr|A0CDY0|A0CDY0_PARTE Chromosome undetermined scaffold_17, whol...    33   5.7  
tr|Q4QJ00|Q4QJ00_LEIMA RNA-binding protein-like protein OS=Leish...    33   7.3  
tr|A5BQQ5|A5BQQ5_VITVI Putative uncharacterized protein OS=Vitis...    33   7.5  
tr|B8P170|B8P170_9APHY Predicted protein OS=Postia placenta Mad-...    33   7.5  
tr|B6IGX1|B6IGX1_CAEBR Putative uncharacterized protein OS=Caeno...    33   9.8  
tr|B8PP69|B8PP69_9APHY Predicted protein (Fragment) OS=Postia pl...    33   9.8  
tr|B8P1C8|B8P1C8_9APHY Predicted protein OS=Postia placenta Mad-...    33   9.8  

>tr|Q2R394|Q2R394_ORYSJ Os11g0531300 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0531300 PE=2 SV=1
          Length = 445

 Score = 37.0 bits (84), Expect = 0.52
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -1

Query: 288 GAPLQHKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECGII-HLIPDCP 148
           G+P   +  P Y+CG D HW R+CP      +N+ C  CG + H   +CP
Sbjct: 394 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCGKLGHWRGNCP 443


>tr|B8BKV6|B8BKV6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_36349 PE=4 SV=1
          Length = 445

 Score = 37.0 bits (84), Expect = 0.52
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -1

Query: 288 GAPLQHKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECGII-HLIPDCP 148
           G+P   +  P Y+CG D HW R+CP      +N+ C  CG + H   +CP
Sbjct: 394 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCGKLGHWRGNCP 443


>tr|A5BQA7|A5BQA7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001910 PE=4 SV=1
          Length = 279

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
 Frame = -1

Query: 252 CGGDHWLRDCPHDEIIRVNAYCTECGII-HLIPDCPKN-------PRKENKL 121
           CG  HW + C      + +  C +CG   H+I DCP+N       P+KENK+
Sbjct: 194 CGKKHWSKPC-----YKESEACFDCGKHGHIIRDCPENKKFIIGKPKKENKM 240


>tr|A3CBX1|A3CBX1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_032793 PE=4 SV=1
          Length = 557

 Score = 35.0 bits (79), Expect = 2.0
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -1

Query: 288 GAPLQHKG-PFYKCGGD-HWLRDCPHDEIIRVNAYCTECG 175
           G+P   +  P Y+CG D HW R+CP      +N+ C  CG
Sbjct: 407 GSPFTPRSNPCYRCGEDGHWSRNCPKPASSPLNSPCYNCG 446


>tr|B2WP59|B2WP59_PYRTR Putative uncharacterized protein
           OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
           GN=PTRG_11769 PE=4 SV=1
          Length = 395

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 19/69 (27%), Positives = 27/69 (39%)
 Frame = -1

Query: 342 ANVGMGEQRHAYQHRGAQGAPLQHKGPFYKCGGDHWLRDCPHDEIIRVNAYCTECGIIHL 163
           A +G+ EQ+   Q           + P   CGG HW +DC                  +L
Sbjct: 256 ATLGVAEQQIQNQKEEQSSCKTYQRTPQCVCGGIHWYKDC-----------------WYL 298

Query: 162 IPDCPKNPR 136
           +PD PK P+
Sbjct: 299 VPDHPKRPK 307


>tr|Q59X67|Q59X67_CANAL Positive regulator of filamentous growth
           OS=Candida albicans GN=EFG1 PE=4 SV=1
          Length = 549

 Score = 33.9 bits (76), Expect = 4.3
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -2

Query: 491 GDAANPAYYPQKNPQRQ-NHGA*YEVHDYQQLHRQQEKEDIAWMNEHCCS*PTSAWASRD 315
           G AAN +YYP    Q+Q N+ + Y     QQ  +QQ+       ++   S P+    +R 
Sbjct: 454 GGAANSSYYPNYYQQQQPNYASSYPYQQQQQKQQQQQPNQQQQSDQQQTSTPSGGAGTRS 513

Query: 314 MHTNTE 297
           +H + +
Sbjct: 514 VHQSPQ 519


>tr|B8P410|B8P410_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_93554 PE=4 SV=1
          Length = 731

 Score = 33.9 bits (76), Expect = 4.3
 Identities = 23/75 (30%), Positives = 35/75 (46%)
 Frame = -2

Query: 395 RQQEKEDIAWMNEHCCS*PTSAWASRDMHTNTEELKEHLYSIRDPSTSVVETIG*ETVLM 216
           R QE + +  M EH         AS  +    E LK+   S+RD +  + E +  E V  
Sbjct: 215 RDQEHDSVVRMREHV---NRVYHASVGLSQECERLKQERESLRDEAWRLKEALAQEAVAR 271

Query: 215 MKSLESTHIAPSVEL 171
           ++   ST  APSV++
Sbjct: 272 LERTRSTEGAPSVDV 286


>tr|Q24ZS6|Q24ZS6_DESHY Putative uncharacterized protein
            OS=Desulfitobacterium hafniense (strain Y51) GN=DSY0677
            PE=4 SV=1
          Length = 1177

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 28/77 (36%), Positives = 38/77 (49%)
 Frame = -1

Query: 381  GRYSLDERTLLFIANVGMGEQRHAYQHRGAQGAPLQHKGPFYKCGGDHWLRDCPHDEIIR 202
            GRYSLDE  L+ +A    GE R AY        P+   GP Y+  GD +LR    D  ++
Sbjct: 930  GRYSLDEERLI-LAGQPYGE-RFAY-----ASVPVAGGGPLYRVQGDCYLR--KSDSTLK 980

Query: 201  VNAYCTECGIIHLIPDC 151
            V  Y  +    ++IP C
Sbjct: 981  VCTYAPDKD--NIIPVC 995


>tr|B3NIQ7|B3NIQ7_DROER GG16133 OS=Drosophila erecta GN=GG16133 PE=4
           SV=1
          Length = 384

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -1

Query: 267 GPFYKCGGDHWLRDCPHDEIIRVNAYCTE--CGIIHLIPDCPKNPRKENKLPC--TCWKQ 100
           G FYK  G++W  +C   E  +    CT   CG ++    CP   +   K  C   CW Q
Sbjct: 198 GMFYK-DGENWTENCKTCECEKGEPKCTMSFCGNLN----CPSERQVMLKDTCCPVCWPQ 252

Query: 99  CLPVKGQK 76
           C P+  +K
Sbjct: 253 CAPMPHEK 260


>tr|Q1HA65|Q1HA65_POLMI Vasa OS=Polyandrocarpa misakiensis GN=PmVas
           PE=2 SV=1
          Length = 705

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 258 YKCGGD-HWLRDCPHDEIIRVNAYCTECGII-HLIPDCPKNPRKENKLPCTCWKQ 100
           +KCG + H  RDCP +     +  C +CG   H+  +CP N    +K    C ++
Sbjct: 98  FKCGEEGHMSRDCPSNTSTGSSKACFKCGEEGHMSRECPNNNNNNSKACFKCGEE 152