BP921148 |
Clone id |
YMU001_000146_C09 |
Library |
YMU01 |
Length |
511 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000146_C09. |
Accession |
BP921148 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2987Contig1 |
Sequence |
CTGGAAGAATGGAGAAACGAAGACTACTACGTCAGAAACAGCGCAATGAAGGAGCAATAC AAATAAACGCAGTCAGTATAACAGAAATGGATGATGACAAAGAAGAACCCATCATTGAAT GCAAAGTAGGAACCAACCAAATCAAAGCGAGAGCACTATTGGATGCAGGAGCTCAAACTA ACCTACTTTCACTCAGTTTGTATAGACAATTGACAAATGACACTAAATTACAAACTGCCA AGCAAGAGTTAAAGAGTTACTCTGAGAATTCAATCAAAACTGTCGGATGCACAGTTTTAC ATATACAGATTAACCGGTATGTGTATCCTCATATGTTTTACGTGGTTGAAGACCAAGCTA CACAACATCCATTATTGCTAGGACAACCATGGTAGAAGCAATACAATGCAATGATTGACT GGAGTTCTAAATCAGTGCTTATCAAATACGAAGGTGAACGTCAATCAGTTAAATTCACCA AAGAAGTAGAGCCAACTCCAAAGGAAGAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P10394 |
Definition |
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster |
Align length |
110 |
Score (bit) |
38.9 |
E-value |
0.014 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2AA34 |
Definition |
tr|Q2AA34|Q2AA34_ASPOF F7F22.15, related OS=Asparagus officinalis |
Align length |
130 |
Score (bit) |
53.1 |
E-value |
7.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921148|Adiantum capillus-veneris mRNA, clone: YMU001_000146_C09. (511 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2AA34|Q2AA34_ASPOF F7F22.15, related OS=Asparagus officinali... 53 7e-06 tr|Q0ZCB7|Q0ZCB7_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 53 7e-06 tr|A5BM91|A5BM91_VITVI Putative uncharacterized protein OS=Vitis... 51 3e-05 tr|A5BST7|A5BST7_VITVI Putative uncharacterized protein OS=Vitis... 51 4e-05 tr|A5AQU2|A5AQU2_VITVI Putative uncharacterized protein OS=Vitis... 51 4e-05 tr|Q0ZCD5|Q0ZCD5_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 50 5e-05 tr|A5BYG3|A5BYG3_VITVI Putative uncharacterized protein OS=Vitis... 50 5e-05 tr|A7PFE2|A7PFE2_VITVI Chromosome chr11 scaffold_14, whole genom... 50 6e-05 tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus ... 49 1e-04 tr|A5BDC2|A5BDC2_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|A5C9C9|A5C9C9_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|A5C706|A5C706_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|A5BJD2|A5BJD2_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|A5B1N0|A5B1N0_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|A5AHE6|A5AHE6_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|A5B8R3|A5B8R3_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04 tr|A5AXM0|A5AXM0_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04 tr|A5AS08|A5AS08_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04 tr|A5C6K1|A5C6K1_VITVI Putative uncharacterized protein OS=Vitis... 48 3e-04 tr|A5BT64|A5BT64_VITVI Putative uncharacterized protein OS=Vitis... 48 3e-04 tr|A5BI07|A5BI07_VITVI Putative uncharacterized protein OS=Vitis... 48 3e-04 tr|A5C0U1|A5C0U1_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|A5BXE9|A5BXE9_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|A5AYI6|A5AYI6_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|A5AV42|A5AV42_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|A5AMM4|A5AMM4_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|A5AIX4|A5AIX4_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|A5C2B6|A5C2B6_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04 tr|A5BXX1|A5BXX1_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04 tr|A5BX31|A5BX31_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04
>tr|Q2AA34|Q2AA34_ASPOF F7F22.15, related OS=Asparagus officinalis GN=20.t00032 PE=4 SV=1 Length = 481
Score = 53.1 bits (126), Expect = 7e-06 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 11/130 (8%) Frame = +3
Query: 96 DKEEPIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQL----TNDTK--LQTAKQELKS 257 D PII C +G I +ALLD GA NLL S+Y+QL N TK LQ A + +K Sbjct: 297 DLGSPIISCIIGNTHID-KALLDLGASVNLLPYSVYQQLGLGILNPTKCTLQLADRSVK- 354
Query: 258 YSENSIKTVGCTVLHIQINRYVYPHMFYVVEDQAT-----QHPLLLGQPW*KQYNAMIDW 422 + + I++ +++P F V+E Q Q P++LG+P+ NA+I+ Sbjct: 355 -----VPMGELEDVLIKVGDFIFPVDFVVLETQPVFNPKGQTPVILGRPFLATSNALINC 409
Query: 423 SSKSVLIKYE 452 + + + +E Sbjct: 410 RTGQMKLSFE 419
>tr|Q0ZCB7|Q0ZCB7_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 Length = 1332
Score = 53.1 bits (126), Expect = 7e-06 Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 6/110 (5%) Frame = +3
Query: 108 PIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQLTNDTKLQTAKQELKSYSENSIKTVG 287 P I C +G ++IK RALLD GA NLL S+++ L N ++L+ A L ++ S+K Sbjct: 184 PTISCFIGEHKIK-RALLDLGASVNLLPYSVFQSL-NLSELKPASVTL-LLADRSVKVPR 240
Query: 288 CTV--LHIQINRYVYPHMFYVVEDQATQ----HPLLLGQPW*KQYNAMID 419 + + +Q+++++YP F V++ Q + P++LG P+ NA+I+ Sbjct: 241 GIIEDVLVQVDKFIYPVDFIVLDRQPVEACNSFPVILGHPFLATSNALIN 290
>tr|A5BM91|A5BM91_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036687 PE=4 SV=1 Length = 861
Score = 51.2 bits (121), Expect = 3e-05 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 7/140 (5%) Frame = +3
Query: 108 PIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQL-TNDTKLQTAKQELKSYSENSIKTV 284 P I +G Q++ +ALLD GA NLL S+Y++L + K + L S + V Sbjct: 654 PTISVNIGGTQVE-KALLDLGASVNLLPYSVYKELGLGELKXTSITLSLADRSVKIPRGV 712
Query: 285 GCTVLHIQINRYVYPHMFYVVEDQ-----ATQHPLLLGQPW*KQYNAMIDWSSKSVLIKY 449 VL +Q++++ YP F V++ P++LG+P+ NA+I+ + S+L ++ Sbjct: 713 IEDVL-VQVDKFYYPVDFVVLDTDPIVKGINYVPIILGRPFLATSNAIINCRNGSMLDQF 771
Query: 450 EGE-RQSVKFTKEVEPTPKE 506 E +S++ +E P P + Sbjct: 772 EESLNESLEVLEEGLPEPSD 791
>tr|A5BST7|A5BST7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021833 PE=4 SV=1 Length = 1744
Score = 50.8 bits (120), Expect = 4e-05 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%) Frame = +3
Query: 108 PIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQL-TNDTKLQTAKQELKSYSENSIKTV 284 P I +G ++ +ALLD GA NLL S+Y+QL + KL L S K V Sbjct: 546 PTISINIGGTHVE-KALLDLGASVNLLPYSMYKQLGLGELKLTAITLSLADRSVKIPKGV 604
Query: 285 GCTVLHIQINRYVYPHMFYVVED-----QATQHPLLLGQPW*KQYNAMID 419 VL +Q++++ YP F V+++ +A P++LG+P+ NA+I+ Sbjct: 605 IEDVL-VQVDKFYYPVDFVVIDNDPTIKEANYVPIILGRPFLATSNAIIN 653
>tr|A5AQU2|A5AQU2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018387 PE=4 SV=1 Length = 1554
Score = 50.8 bits (120), Expect = 4e-05 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 8/146 (5%) Frame = +3
Query: 96 DKEEPIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQL-TNDTKLQTAKQELKSYSENS 272 D PII +G ++ +ALLD GA NLLS S+Y+QL + K T L S Sbjct: 459 DPGSPIISVMIG-GKVVEKALLDLGASVNLLSYSIYKQLGLGELKPTTITLSLADRSVKI 517
Query: 273 IKTVGCTVLHIQINRYVYPHMFYVVE-----DQATQHPLLLGQPW*KQYNAMIDWSSKSV 437 + V VL +Q++ + YP F V++ +A P++LG+P+ NA+I+ + + Sbjct: 518 PRGVIEDVL-VQVDNFYYPVDFIVLDTDPTVKEANLVPIILGRPFLATSNAIINCRNGLM 576
Query: 438 LIKYEGER--QSVKFTKEVEPTPKEE 509 + + ++ + + + TP+EE Sbjct: 577 QLTFGNMTLDLNIFYMSKKQITPEEE 602
>tr|Q0ZCD5|Q0ZCD5_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 Length = 619
Score = 50.4 bits (119), Expect = 5e-05 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 5/109 (4%) Frame = +3
Query: 108 PIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQLT-NDTKLQTAKQELKSYSENSIKTV 284 P I C +G ++I+ RALLD GA NLL S+++ L + K + L S K + Sbjct: 285 PTISCFIGEHKIE-RALLDLGASVNLLPYSVFQSLNLGELKPTSVTLLLADRSVKVPKGI 343
Query: 285 GCTVLHIQINRYVYPHMFYVVEDQATQH----PLLLGQPW*KQYNAMID 419 VL +Q+++++YP F V++ Q + P++LG+P+ NA+I+ Sbjct: 344 VEDVL-VQVDKFIYPVDFVVLDTQPVEACNSIPVILGRPFLATSNALIN 391
>tr|A5BYG3|A5BYG3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025288 PE=4 SV=1 Length = 860
Score = 50.4 bits (119), Expect = 5e-05 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%) Frame = +3
Query: 96 DKEEPIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQL-TNDTKLQTAKQELKSYSENS 272 D P I +G ++ +ALLD GA NLL S+Y+QL + K T L S Sbjct: 474 DPRSPTISVMIG-GKVVEKALLDLGASVNLLPYSVYKQLGLGELKPTTITLSLADRSVKI 532
Query: 273 IKTVGCTVLHIQINRYVYPHMFYVVE-----DQATQHPLLLGQPW*KQYNAMIDWSSKSV 437 + V VL +Q++ + YP F V++ +A P++LG+P+ NA+I++ + + Sbjct: 533 PRGVIEDVL-VQVDNFYYPVDFIVLDTDPTVKEANLVPIILGRPFLATSNAIINYRNGLM 591
Query: 438 LIKYEGER--QSVKFTKEVEPTPKEE 509 + + ++ + + + TPKEE Sbjct: 592 QLTFGNMTLDLNIFYMSKKQITPKEE 617
>tr|A7PFE2|A7PFE2_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017028001 PE=4 SV=1 Length = 755
Score = 50.1 bits (118), Expect = 6e-05 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%) Frame = +3
Query: 96 DKEEPIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQL-TNDTKLQTAKQELKSYSENS 272 D P I +G ++ +ALLD GA NLL S+Y+QL + K T L S Sbjct: 460 DPGSPTISVMIG-GKVVEKALLDLGASVNLLPYSVYKQLGLGELKPTTITLSLADRSVKI 518
Query: 273 IKTVGCTVLHIQINRYVYPHMFYVVE-----DQATQHPLLLGQPW*KQYNAMIDWSSKSV 437 + V VL +Q++ + YP F V++ +A P++LG+P+ NA+I+ + + Sbjct: 519 PRGVIEDVL-VQVDNFYYPVNFIVLDTDPTVKEANLVPIILGRPFLATSNAIINCRNGLM 577
Query: 438 LIKYEGER--QSVKFTKEVEPTPKEE 509 + + ++ +T + + TP+EE Sbjct: 578 QLTFGNMTLDLNIFYTSKKQTTPEEE 603
>tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus officinalis GN=19.t00014 PE=4 SV=1 Length = 1788
Score = 48.9 bits (115), Expect = 1e-04 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 6/110 (5%) Frame = +3
Query: 108 PIIECKVGTNQIKARALLDAGAQTNLLSLSLYRQL-TNDTKLQTAKQELKSYSENSIKTV 284 P I C +G I +ALLD GA NLL S+Y+QL + K +L S K Sbjct: 545 PTIPCVIGNTHID-KALLDLGASVNLLPYSVYQQLGVGELKPTRCTLQLADRSVKIPKGE 603
Query: 285 GCTVLHIQINRYVYPHMFYVVEDQ-----ATQHPLLLGQPW*KQYNAMID 419 VL I++ +++P F V+E Q +Q P++LG+P+ NA+I+ Sbjct: 604 VEDVL-IKVGEFIFPVDFIVLETQPVSNLKSQIPVILGRPFLATSNALIN 652
>tr|A5BDC2|A5BDC2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029416 PE=4 SV=1 Length = 286
Score = 48.9 bits (115), Expect = 1e-04 Identities = 33/126 (26%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Frame = +3
Query: 6 RMEKRRLLRQKQRNEGAIQINAVSITEMDDDKEEPIIECKVGTNQIKA-RALLDAGAQTN 182 + +++RL+R I + S+T++D E+ ++ KVG + R L++ + N Sbjct: 116 KRQRQRLVRVASVRGECISFSVHSLTKVDPTYEDALV-LKVGVDNFDVHRILINPRSSIN 174
Query: 183 LLSLSLYRQL-TNDTKLQTAKQELKSYSENSIKTVGCTVLHIQINRYVYPHMFYVVEDQA 359 LL +S YRQ+ + + L+ + L S+++ SI ++G VL +Q+ F VV+D + Sbjct: 175 LLQMSAYRQMGYSSSTLENPGRILISFNKASIVSIGDVVLPVQVGPVTLNVYFLVVDDLS 234
Query: 360 TQHPLL 377 + + ++ Sbjct: 235 SYNAIM 240
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