| BP921149 |
| Clone id |
YMU001_000146_C10 |
| Library |
YMU01 |
| Length |
596 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000146_C10. |
| Accession |
BP921149 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
TTACTGTCCTACGCTCTGAGGTTAAAGATCAGCATTGAATGTATACAAAAAATATGTAAT
AAGCAGCTATATCATTCAACACAAAGTGAACCACTGTGGCGGGGTCAGAGGCCTCGGTGT
AAAATATCTGACCGCACAAAATTGTACTACTTAATATTTCTACAAACTCTGTTTAGAACC
AACAATTATACTCTTCAGCCGTTTTGTGTGAGATGCAAACGAGGACCCCACTTTGAAGCT
GGTATACTTGGAGAACAACGAAGGCCCAGTATCCAAAACCCATCTTTGCAAATCATCATC
CTTTGGGTCCTCAACGGTAACATGCGACGGTTCTGTCACGCTGCGACCTTGCGCCAACCT
GCTGACACGTTCTCTGTCATTACTGTCGTCATGCTGTCCATTGCCGCTACCATGTGGATA
CGTTTCTGGCAATTTTTCGACCTCTCGTCCTGTCTTTCCCAGCCATCTTCTTGAGTCAAG
ATAGCTCCTGTTCACAACTTCAGGTGAACAATATCTAGGACTCCGCACGGTCCAAGTTTC
TCTGTCACGCATATCAGCCCTATGCTTCTCTTTCAATTGCTCTTCTAGCTTCCGGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P21541 |
| Definition |
sp|P21541|ZYG11_CAEEL Early embryogenesis protein zyg-11 OS=Caenorhabditis elegans |
| Align length |
35 |
| Score (bit) |
32.0 |
| E-value |
2.4 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921149|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C10.
(596 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P21541|ZYG11_CAEEL Early embryogenesis protein zyg-11 OS=Caen... 32 2.4
sp|Q8M9U7|RK2_CHAGL 50S ribosomal protein L2, chloroplastic OS=C... 32 3.2
sp|Q5UQA1|YR535_MIMIV Uncharacterized protein R535 OS=Acanthamoe... 31 4.1
sp|P67333|Y973_STRP8 UPF0176 protein spyM18_0973 OS=Streptococcu... 31 5.4
sp|P67332|Y915_STRP1 UPF0176 protein SPy_0915/M5005_Spy0717 OS=S... 31 5.4
sp|Q1J713|Y811_STRPF UPF0176 protein MGAS10750_Spy0811 OS=Strept... 31 5.4
sp|Q1JC67|Y789_STRPB UPF0176 protein MGAS2096_Spy0789 OS=Strepto... 31 5.4
sp|Q1JH95|Y776_STRPD UPF0176 protein MGAS10270_Spy0776 OS=Strept... 31 5.4
sp|Q1JM51|Y773_STRPC UPF0176 protein MGAS9429_Spy0773 OS=Strepto... 31 5.4
sp|Q5XCI5|Y743_STRP6 UPF0176 protein M6_Spy0743 OS=Streptococcus... 31 5.4
sp|Q48TZ6|Y697_STRPM UPF0176 protein M28_Spy0697 OS=Streptococcu... 31 5.4
sp|Q8K7U2|Y630_STRP3 UPF0176 protein SpyM3_0630/SPs1223 OS=Strep... 31 5.4
sp|P67328|Y1504_STRA3 UPF0176 protein gbs1504 OS=Streptococcus a... 31 5.4
sp|Q3K076|Y1469_STRA1 UPF0176 protein SAK_1469 OS=Streptococcus ... 31 5.4
sp|P67329|Y1434_STRA5 UPF0176 protein SAG1434 OS=Streptococcus a... 31 5.4
sp|A2REZ0|Y1090_STRPG UPF0176 protein SpyM51090 OS=Streptococcus... 31 5.4
sp|A1DFV9|IML1_NEOFI Vacuolar membrane-associated protein iml1 O... 30 7.1
sp|P10262|GAG_FLV Gag polyprotein OS=Feline leukemia virus GN=ga... 30 7.1
sp|Q01W95|RL2_SOLUE 50S ribosomal protein L2 OS=Solibacter usita... 30 9.2
sp|Q9Z7R0|RL2_CHLPN 50S ribosomal protein L2 OS=Chlamydia pneumo... 30 9.2
sp|Q4WHH4|IML1_ASPFU Vacuolar membrane-associated protein iml1 O... 30 9.2
>sp|P21541|ZYG11_CAEEL Early embryogenesis protein zyg-11
OS=Caenorhabditis elegans GN=zyg-11 PE=1 SV=1
Length = 799
Score = 32.0 bits (71), Expect = 2.4
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -1
Query: 482 ILTQEDGWERQDERSKNCQKRIHMVAAMDSMTTVM 378
+LT DGWE +++R + C+K + ++ ++ + M
Sbjct: 659 LLTNTDGWESENQRDEACEKLLELIEQYPTLPSAM 693
>sp|Q8M9U7|RK2_CHAGL 50S ribosomal protein L2, chloroplastic
OS=Chaetosphaeridium globosum GN=rpl2 PE=3 SV=1
Length = 275
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = -3
Query: 492 NRSY--LDSRRWLGK--TGREVEKLPETYPHGSGNGQ 394
NRS+ S+RWLGK T R V P +PHG G G+
Sbjct: 202 NRSFGKAGSKRWLGKKPTVRGVVMNPVDHPHGGGEGR 238
>sp|Q5UQA1|YR535_MIMIV Uncharacterized protein R535 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R535 PE=4 SV=1
Length = 356
Score = 31.2 bits (69), Expect = 4.1
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = -3
Query: 324 HVTVEDPKDDDLQRWVLDTGPSLFSKYTSFKVGSSFASHTKRLKSIIVGSKQ 169
H V++P + L + +L++ ++ +KY K+ S S KR+ +++V S Q
Sbjct: 141 HQYVKNPNNVTLYKKILESINTITTKYNLQKIQESLCSEIKRIDNLLVNSYQ 192
>sp|P67333|Y973_STRP8 UPF0176 protein spyM18_0973 OS=Streptococcus
pyogenes serotype M18 GN=spyM18_0973 PE=3 SV=1
Length = 328
Score = 30.8 bits (68), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 IECIQKICNKQLYHSTQSEPLW-RGQRPRCKISDRTK 141
+ C CNKQ++ S ++E + RG P C+ +R +
Sbjct: 263 VNCANPFCNKQIFASEENETKYVRGCSPECRAHERNR 299
>sp|P67332|Y915_STRP1 UPF0176 protein SPy_0915/M5005_Spy0717
OS=Streptococcus pyogenes serotype M1 GN=SPy_0915 PE=3
SV=1
Length = 328
Score = 30.8 bits (68), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 IECIQKICNKQLYHSTQSEPLW-RGQRPRCKISDRTK 141
+ C CNKQ++ S ++E + RG P C+ +R +
Sbjct: 263 VNCANPFCNKQIFASEENETKYVRGCSPECRAHERNR 299
>sp|Q1J713|Y811_STRPF UPF0176 protein MGAS10750_Spy0811
OS=Streptococcus pyogenes serotype M4 (strain MGAS10750)
GN=MGAS10750_Spy0811 PE=3 SV=1
Length = 328
Score = 30.8 bits (68), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 IECIQKICNKQLYHSTQSEPLW-RGQRPRCKISDRTK 141
+ C CNKQ++ S ++E + RG P C+ +R +
Sbjct: 263 VNCANPFCNKQIFASEENETKYVRGCSPECRAHERNR 299
>sp|Q1JC67|Y789_STRPB UPF0176 protein MGAS2096_Spy0789
OS=Streptococcus pyogenes serotype M12 (strain MGAS2096)
GN=MGAS2096_Spy0789 PE=3 SV=1
Length = 328
Score = 30.8 bits (68), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 IECIQKICNKQLYHSTQSEPLW-RGQRPRCKISDRTK 141
+ C CNKQ++ S ++E + RG P C+ +R +
Sbjct: 263 VNCANPFCNKQIFASEENETKYVRGCSPECRAHERNR 299
>sp|Q1JH95|Y776_STRPD UPF0176 protein MGAS10270_Spy0776
OS=Streptococcus pyogenes serotype M2 (strain MGAS10270)
GN=MGAS10270_Spy0776 PE=3 SV=1
Length = 328
Score = 30.8 bits (68), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 IECIQKICNKQLYHSTQSEPLW-RGQRPRCKISDRTK 141
+ C CNKQ++ S ++E + RG P C+ +R +
Sbjct: 263 VNCTNPFCNKQIFASEENETKYVRGCSPECRAHERNR 299
>sp|Q1JM51|Y773_STRPC UPF0176 protein MGAS9429_Spy0773
OS=Streptococcus pyogenes serotype M12 (strain MGAS9429)
GN=MGAS9429_Spy0773 PE=3 SV=1
Length = 328
Score = 30.8 bits (68), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 IECIQKICNKQLYHSTQSEPLW-RGQRPRCKISDRTK 141
+ C CNKQ++ S ++E + RG P C+ +R +
Sbjct: 263 VNCANPFCNKQIFASEENETKYVRGCSPECRAHERNR 299
>sp|Q5XCI5|Y743_STRP6 UPF0176 protein M6_Spy0743 OS=Streptococcus
pyogenes serotype M6 GN=M6_Spy0743 PE=3 SV=1
Length = 328
Score = 30.8 bits (68), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 IECIQKICNKQLYHSTQSEPLW-RGQRPRCKISDRTK 141
+ C CNKQ++ S ++E + RG P C+ +R +
Sbjct: 263 VNCANPFCNKQIFASEENETKYVRGCSPECRAHERNR 299
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9SZ44 |
| Definition |
tr|A9SZ44|A9SZ44_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
58 |
| Score (bit) |
35.8 |
| E-value |
1.9 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921149|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_C10.
(596 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SZ44|A9SZ44_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.9
tr|B4FYJ8|B4FYJ8_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.5
tr|B6IFW1|B6IFW1_CAEBR Putative uncharacterized protein OS=Caeno... 35 2.5
tr|Q9VIK1|Q9VIK1_DROME CG9318 OS=Drosophila melanogaster GN=CG93... 35 3.3
tr|B4Q3H1|B4Q3H1_DROSI GD21683 OS=Drosophila simulans GN=GD21683... 35 3.3
tr|B4P6K8|B4P6K8_DROYA GE13546 OS=Drosophila yakuba GN=GE13546 P... 35 3.3
tr|B4KJ02|B4KJ02_DROMO GI19598 OS=Drosophila mojavensis GN=GI195... 35 3.3
tr|B4IFF1|B4IFF1_DROSE GM23311 OS=Drosophila sechellia GN=GM2331... 35 3.3
tr|B3NLY5|B3NLY5_DROER GG21552 OS=Drosophila erecta GN=GG21552 P... 35 3.3
tr|Q21XC4|Q21XC4_RHOFD Putative uncharacterized protein OS=Rhodo... 35 4.3
tr|B6T8S5|B6T8S5_MAIZE Putative uncharacterized protein OS=Zea m... 34 5.6
tr|B6QH91|B6QH91_PENMA Putative uncharacterized protein OS=Penic... 34 5.6
tr|Q29LW7|Q29LW7_DROPS GA21696 OS=Drosophila pseudoobscura pseud... 34 7.3
tr|B4G740|B4G740_DROPE GL19593 OS=Drosophila persimilis GN=GL195... 34 7.3
tr|B3MK18|B3MK18_DROAN GF14550 OS=Drosophila ananassae GN=GF1455... 34 7.3
tr|B0CRX3|B0CRX3_LACBS Predicted protein OS=Laccaria bicolor (st... 34 7.3
tr|B4MWB9|B4MWB9_DROWI GK14911 OS=Drosophila willistoni GN=GK149... 33 9.5
tr|B4LV90|B4LV90_DROVI GJ17423 OS=Drosophila virilis GN=GJ17423 ... 33 9.5
tr|B4JAJ6|B4JAJ6_DROGR GH10847 OS=Drosophila grimshawi GN=GH1084... 33 9.5
tr|B6HQ58|B6HQ58_PENCH Pc22g06710 protein OS=Penicillium chrysog... 33 9.5
tr|B0DAH2|B0DAH2_LACBS Predicted protein OS=Laccaria bicolor (st... 33 9.5
>tr|A9SZ44|A9SZ44_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_190037 PE=4 SV=1
Length = 955
Score = 35.8 bits (81), Expect = 1.9
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 450 GREVEKLPETYPHGSGNGQHDDSNDRERVSRLAQGRSVTEPSHVTVEDPKDDDLQRWV 277
G E EK+ + Y G G+ D+S+D+ RV R A+ + E + TV+ ++ WV
Sbjct: 31 GEEAEKIADKYRIG-GDSDSDESDDQRRVVRSAKDKRFDELAQTTVQIQNQININDWV 87
>tr|B4FYJ8|B4FYJ8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 346
Score = 35.4 bits (80), Expect = 2.5
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = -3
Query: 594 RKLEEQLKEKHRADMRDRETWTVRSPRYCSPEVVNRSYLDSRRWLGKTGREVEKLPETYP 415
++L+ +L+E ++D SP CS E V T E +K E+
Sbjct: 227 KRLKPKLQEPKALQVQDLSNTVKGSPSLCSHEAVKNPVKIF------TVEETKKCHES-A 279
Query: 414 HGSGNGQHDDSNDRERVSRLAQGRSVTEPSHVTVEDPKDDDLQRW-VLDTGPSLF 253
+ G H NDR+++ + QG+ + + + + P DD+L + LD P F
Sbjct: 280 NDVSEGTHFTGNDRQKLDKDVQGK--RDKTQLVEDSPTDDELDDYPFLDNSPVKF 332
>tr|B6IFW1|B6IFW1_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG27239 PE=4 SV=1
Length = 413
Score = 35.4 bits (80), Expect = 2.5
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = -2
Query: 286 KMGFGYWAFVVLQVYQLQSGVLVCISHKTAEEYNCWF*TEFVEILSSTILCGQIFYTEAS 107
K F ++ F ++ YQL + + ++ + + + CW E ++L S + FYT
Sbjct: 210 KCSFAFFTFFIMVAYQLIVSIRIASTYISHKHHICWVRWEMAQLLLSVMWLFNPFYTSCP 269
Query: 106 DPATVVHFVLNDIAAYYIFFVYI 38
+ +F+ IA Y + Y+
Sbjct: 270 EE----YFLPGIIAKYTFNYQYV 288
>tr|Q9VIK1|Q9VIK1_DROME CG9318 OS=Drosophila melanogaster GN=CG9318
PE=2 SV=1
Length = 659
Score = 35.0 bits (79), Expect = 3.3
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -2
Query: 280 GFGYWAFVVLQVYQLQSGVLVCISHKTAEEYNCW---F*TEFVEILSSTILCGQIFYTEA 110
GF + FV+L + ++ +L+C H AE+Y+ W F T + I C F T+
Sbjct: 552 GFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKL 611
Query: 109 SDPATVVHFVLNDIAAYYIFFVY 41
S + D A+ +++F Y
Sbjct: 612 S---------IKDSASTFLYFGY 625
>tr|B4Q3H1|B4Q3H1_DROSI GD21683 OS=Drosophila simulans GN=GD21683
PE=4 SV=1
Length = 659
Score = 35.0 bits (79), Expect = 3.3
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -2
Query: 280 GFGYWAFVVLQVYQLQSGVLVCISHKTAEEYNCW---F*TEFVEILSSTILCGQIFYTEA 110
GF + FV+L + ++ +L+C H AE+Y+ W F T + I C F T+
Sbjct: 552 GFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKL 611
Query: 109 SDPATVVHFVLNDIAAYYIFFVY 41
S + D A+ +++F Y
Sbjct: 612 S---------IKDSASTFLYFGY 625
>tr|B4P6K8|B4P6K8_DROYA GE13546 OS=Drosophila yakuba GN=GE13546 PE=4
SV=1
Length = 659
Score = 35.0 bits (79), Expect = 3.3
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -2
Query: 280 GFGYWAFVVLQVYQLQSGVLVCISHKTAEEYNCW---F*TEFVEILSSTILCGQIFYTEA 110
GF + FV+L + ++ +L+C H AE+Y+ W F T + I C F T+
Sbjct: 552 GFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKL 611
Query: 109 SDPATVVHFVLNDIAAYYIFFVY 41
S + D A+ +++F Y
Sbjct: 612 S---------IKDSASTFLYFGY 625
>tr|B4KJ02|B4KJ02_DROMO GI19598 OS=Drosophila mojavensis GN=GI19598
PE=4 SV=1
Length = 657
Score = 35.0 bits (79), Expect = 3.3
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -2
Query: 280 GFGYWAFVVLQVYQLQSGVLVCISHKTAEEYNCW---F*TEFVEILSSTILCGQIFYTEA 110
GF + F++L + ++ +L+C H AE+Y+ W F T + I C F+T+
Sbjct: 550 GFLFLVFLILIITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFFTKL 609
Query: 109 SDPATVVHFVLNDIAAYYIFFVY 41
S + D A+ +++F Y
Sbjct: 610 S---------IKDSASTFLYFGY 623
>tr|B4IFF1|B4IFF1_DROSE GM23311 OS=Drosophila sechellia GN=GM23311
PE=4 SV=1
Length = 659
Score = 35.0 bits (79), Expect = 3.3
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -2
Query: 280 GFGYWAFVVLQVYQLQSGVLVCISHKTAEEYNCW---F*TEFVEILSSTILCGQIFYTEA 110
GF + FV+L + ++ +L+C H AE+Y+ W F T + I C F T+
Sbjct: 552 GFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKL 611
Query: 109 SDPATVVHFVLNDIAAYYIFFVY 41
S + D A+ +++F Y
Sbjct: 612 S---------IKDSASTFLYFGY 625
>tr|B3NLY5|B3NLY5_DROER GG21552 OS=Drosophila erecta GN=GG21552 PE=4
SV=1
Length = 659
Score = 35.0 bits (79), Expect = 3.3
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -2
Query: 280 GFGYWAFVVLQVYQLQSGVLVCISHKTAEEYNCW---F*TEFVEILSSTILCGQIFYTEA 110
GF + FV+L + ++ +L+C H AE+Y+ W F T + I C F T+
Sbjct: 552 GFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKL 611
Query: 109 SDPATVVHFVLNDIAAYYIFFVY 41
S + D A+ +++F Y
Sbjct: 612 S---------IKDSASTFLYFGY 625
>tr|Q21XC4|Q21XC4_RHOFD Putative uncharacterized protein
OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118) GN=Rfer_1853 PE=4 SV=1
Length = 520
Score = 34.7 bits (78), Expect = 4.3
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -3
Query: 366 VSRLAQGRSVTEPSHVTVEDPKDDDLQRWVLDTG 265
++R+A G++VT TV + + DDL RW+LD G
Sbjct: 391 IARMAAGQAVTAAYAETVREMRADDLYRWLLDYG 424
|