BP921154 |
Clone id |
YMU001_000146_D03 |
Library |
YMU01 |
Length |
532 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000146_D03. |
Accession |
BP921154 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAAGAATTCGCGCGGCTCCTCGGGAATGGAGCTGTCCCCCCCATCACTAGCATTGCAGAG CAGTTGAGTGGGACTGCTCTCCGCGCTGATCATCTCAGAATCACTATTATCGACTTGCTC AGCACAAGTTTGGCCAATCCTCTGATTAACAATTCTTGCTGATGCCTTATCTGGAAGTGT AAATATTAAGCCAACCAGCCAATCCAATGCAGATGCAACTTCTGCAATGAAGTCGATAAT ATCCACTTTTCCTTGCACAAGACTGTTACATAGATTTATTAGACTTTCTACACAAGCATC CAGACCAGAGCTTCTCCATTGCTTCCACGGGCTGGAGAATTCAGGCATTCCATCATTCTC AAGGGATGGAGCTGAAATCCACTCTGCGTAAGGGAAATTATAGTCTGTCTGGCCAATACT CTCCACTATGTCAAGAACCTTCCGCACTGCTGCAGCTAAATCTGCACCAATACCACAAAT TTCTGTTTCTGATGTCCGGAGAGAAACTGGGTCTGCAGGAGAAGTAAAATTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SLN1 |
Definition |
sp|Q9SLN1|FPP7_ARATH Filament-like plant protein 7 OS=Arabidopsis thaliana |
Align length |
103 |
Score (bit) |
48.5 |
E-value |
2.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BFY8 |
Definition |
tr|A5BFY8|A5BFY8_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
120 |
Score (bit) |
55.5 |
E-value |
2.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921154|Adiantum capillus-veneris mRNA, clone: YMU001_000146_D03. (518 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BFY8|A5BFY8_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|A9T990|A9T990_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06 tr|A5C0S3|A5C0S3_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|A7PLD9|A7PLD9_VITVI Chromosome chr7 scaffold_20, whole genome... 54 5e-06 tr|Q7XT52|Q7XT52_ORYSJ Os04g0649200 protein OS=Oryza sativa subs... 45 0.003 tr|Q25AN2|Q25AN2_ORYSA H0212B02.1 protein OS=Oryza sativa GN=H02... 45 0.003 tr|B8AVK0|B8AVK0_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.003 tr|A3AY25|A3AY25_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.003 tr|A8IRY2|A8IRY2_CHLRE Predicted protein OS=Chlamydomonas reinha... 35 2.2 tr|B3ED01|B3ED01_CHLL2 Putative uncharacterized protein OS=Chlor... 35 2.9 tr|Q6SFY4|Q6SFY4_9BACT Leucyl-tRNA synthetase OS=uncultured mari... 35 2.9 tr|A0YRI9|A0YRI9_9CYAN Putative uncharacterized protein OS=Lyngb... 34 5.0 tr|Q8EGX3|Q8EGX3_SHEON Putative uncharacterized protein OS=Shewa... 33 6.5 tr|A2E858|A2E858_TRIVA Putative uncharacterized protein OS=Trich... 33 6.5
>tr|A5BFY8|A5BFY8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042269 PE=4 SV=1 Length = 1124
Score = 55.5 bits (132), Expect = 2e-06 Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 6/120 (5%) Frame = -2
Query: 481 TSETEICGIGADLAAAVRKVLDIVESIGQTDYNFPYAEWISA------PSLENDGMPEFS 320 +SET + +DL+ ++ K+++++E I ++ E S P ++ + Sbjct: 616 SSETSNQKLQSDLSKSICKMVELIEGISLPSLDYDTQETFSRKDGSFFPHKNSETPTGYV 675
Query: 319 SPWKQWRSSGLDACVESLINLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTLPDKASAR 140 QW++S L + + ++ C+ L+ GK D+ F E+ SALDW++ F+L D +S + Sbjct: 676 VRVFQWKTSELRSVLNQFVHSCDDLLNGKADLEKFARELTSALDWIMNHCFSLQDVSSMK 735
>tr|A9T990|A9T990_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_89752 PE=4 SV=1 Length = 1213
Score = 55.1 bits (131), Expect = 2e-06 Identities = 36/109 (33%), Positives = 58/109 (53%) Frame = -2
Query: 499 DPVSLRTSETEICGIGADLAAAVRKVLDIVESIGQTDYNFPYAEWISAPSLENDGMPEFS 320 + S+ +E++ +LA AVRK+ VE + Q +S P L + E S Sbjct: 618 EQASISDAESKADSPHLELAIAVRKIFHSVEMLYQATGYSCTPSVMSLPKLITN---EIS 674
Query: 319 SPWKQWRSSGLDACVESLINLCNSLVQGKVDIIDFIAEVASALDWLVGL 173 + +WR+ GL + +L ++ N L+QG+ D IDFI EV + LD++V L Sbjct: 675 LRY-EWRNPGLKTILRNLAHVSNMLLQGQTDFIDFIVEVGTVLDYIVSL 722
>tr|A5C0S3|A5C0S3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025322 PE=4 SV=1 Length = 999
Score = 55.1 bits (131), Expect = 2e-06 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%) Frame = -2
Query: 451 ADLAAAVRKVLDIVESIGQTDYNFPYAEWISAPSLENDGMPEFSSPWK------------ 308 +DL+ ++ K++++++S T +AP+ ++G + SSP K Sbjct: 624 SDLSKSICKIIELIKSFNLTSLTNS-----NAPNEGSEG-DKSSSPCKNSPTPADYLVHV 677
Query: 307 -QWRSSGLDACVESLINLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTLPDKASAR 140 +W+SS L + + LIN+CN L+ K D+ +F+ E+A L W++ TL D +S R Sbjct: 678 FRWKSSELSSVLFQLINICNDLLSEKADLENFVGELAFTLHWIMSNCITLQDGSSMR 734
>tr|A7PLD9|A7PLD9_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019532001 PE=4 SV=1 Length = 508
Score = 53.9 bits (128), Expect = 5e-06 Identities = 32/118 (27%), Positives = 61/118 (51%) Frame = -2
Query: 493 VSLRTSETEICGIGADLAAAVRKVLDIVESIGQTDYNFPYAEWISAPSLENDGMPEFSSP 314 VS R + I I +DL+ ++ K+++++E I F + P ++ + Sbjct: 366 VSQRNPDEIIEDIRSDLSKSICKMVELIEGIK----TFSRKDGSFFPHKNSETPTGYVVR 421
Query: 313 WKQWRSSGLDACVESLINLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTLPDKASAR 140 QW++S L + + ++ C+ L+ GK D+ F E+ SALDW++ F+L D +S + Sbjct: 422 VFQWKTSELRSVLNQFVHSCDDLLNGKADLEKFARELTSALDWIMNHCFSLQDVSSMK 479
>tr|Q7XT52|Q7XT52_ORYSJ Os04g0649200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0010D21.14 PE=2 SV=2 Length = 916
Score = 44.7 bits (104), Expect = 0.003 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 3/102 (2%) Frame = -2
Query: 436 AVRKVLDIVESIGQT---DYNFPYAEWISAPSLENDGMPEFSSPWKQWRSSGLDACVESL 266 AV K+++++E + Q DY+ + ++ + + + W++S L + +++ Sbjct: 490 AVLKLIELIEGVVQRSSKDYSSTVVLSGGSEGDRSNTLTGYVARAFLWKTSELTSVLQNF 549
Query: 265 INLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTLPDKASAR 140 + CN L+ G D+ F+ E+ LDW++ F+L D + R Sbjct: 550 VLGCNELLYGSTDVERFVLEINITLDWIISHCFSLQDVSDMR 591
>tr|Q25AN2|Q25AN2_ORYSA H0212B02.1 protein OS=Oryza sativa GN=H0212B02.1 PE=4 SV=1 Length = 993
Score = 44.7 bits (104), Expect = 0.003 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 3/102 (2%) Frame = -2
Query: 436 AVRKVLDIVESIGQT---DYNFPYAEWISAPSLENDGMPEFSSPWKQWRSSGLDACVESL 266 AV K+++++E + Q DY+ + ++ + + + W++S L + +++ Sbjct: 567 AVLKLIELIEGVVQRSSKDYSSTVVLSGGSEGDRSNTLTGYVARAFLWKTSELTSVLQNF 626
Query: 265 INLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTLPDKASAR 140 + CN L+ G D+ F+ E+ LDW++ F+L D + R Sbjct: 627 VLGCNELLYGSTDVERFVLEINITLDWIISHCFSLQDVSDMR 668
>tr|B8AVK0|B8AVK0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17686 PE=4 SV=1 Length = 916
Score = 44.7 bits (104), Expect = 0.003 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 3/102 (2%) Frame = -2
Query: 436 AVRKVLDIVESIGQT---DYNFPYAEWISAPSLENDGMPEFSSPWKQWRSSGLDACVESL 266 AV K+++++E + Q DY+ + ++ + + + W++S L + +++ Sbjct: 490 AVLKLIELIEGVVQRSSKDYSSTVVLSGGSEGDRSNTLTGYVARAFLWKTSELTSVLQNF 549
Query: 265 INLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTLPDKASAR 140 + CN L+ G D+ F+ E+ LDW++ F+L D + R Sbjct: 550 VLGCNELLYGSTDVERFVLEINITLDWIISHCFSLQDVSDMR 591
>tr|A3AY25|A3AY25_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015697 PE=4 SV=1 Length = 993
Score = 44.7 bits (104), Expect = 0.003 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 3/102 (2%) Frame = -2
Query: 436 AVRKVLDIVESIGQT---DYNFPYAEWISAPSLENDGMPEFSSPWKQWRSSGLDACVESL 266 AV K+++++E + Q DY+ + ++ + + + W++S L + +++ Sbjct: 567 AVLKLIELIEGVVQRSSKDYSSTVVLSGGSEGDRSNTLTGYVARAFLWKTSELTSVLQNF 626
Query: 265 INLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTLPDKASAR 140 + CN L+ G D+ F+ E+ LDW++ F+L D + R Sbjct: 627 VLGCNELLYGSTDVERFVLEINITLDWIISHCFSLQDVSDMR 668
>tr|A8IRY2|A8IRY2_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_170684 PE=4 SV=1 Length = 387
Score = 35.0 bits (79), Expect = 2.2 Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 15/142 (10%) Frame = -2
Query: 433 VRKVLDIVESIGQTDYNFPYAEWISAPSLENDGMPEFSSPWKQWRS-----SGLDACVES 269 +R+ D S G Y P++ W+S PS+ P + P W S S L+ Sbjct: 116 IRRDPDSSGSNGAPPYP-PWSAWLS-PSV-----PSWYWPGSSWTSPPQEPSLLERVAGG 168
Query: 268 LINLCNSLVQGKVDIIDFIAEVASALDWLVGLIFTL----------PDKASARIVNQRIG 119 L L L G +DIIDF+ EVA L + I T+ PD AS N G Sbjct: 169 LSGLARDL--GLMDIIDFVQEVAPLLPEIASDIGTVAGYVDKLIQNPDAASLLDANGASG 226
Query: 118 QTCAEQVDNSDSEMISAESSPT 53 + E + ++ M+S ++ T Sbjct: 227 EALFETLRDTLLVMLSTDTGST 248
>tr|B3ED01|B3ED01_CHLL2 Putative uncharacterized protein OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=Clim_1366 PE=3 SV=1 Length = 481
Score = 34.7 bits (78), Expect = 2.9 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = -2
Query: 175 LIFTLPDKASARIVNQRIGQTCAEQVDNSDSEMISAESSPTQLLCNASDG 26 LI T P AR++N R G+T A QV +++I S+P + N S G Sbjct: 107 LICTFPLTVKARLINSRFGETLARQVKPMQTDLIITLSTPISIDHNWSLG 156
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