BP921164
Clone id YMU001_000146_E02
Library
Length 274
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTAGCTGTACAAAACTGCTTGCTGTGATGTTGTTACATATGGTAAGAGTAGCCTTTTTGG
CCCTTAGCCCAGCTGCACCAATCCAGCTGGATAAGCCATGGAGACCCCCACTGTGGTAAC
TCTATCACTCTTGACGAGGATACTGCATGATACAACCAACCAGGTATGTGCTTCTCGTGA
CGGGGTGCCAAGATGCAAGACCATAAAGAACACTTGGATATGAAATCCTTGCTATAATTT
ACAAAAACCTCTATTCACCCTGTGCAAAACCTTT
■■Homology search results ■■ -
sp_hit_id Q9W770
Definition sp|Q9W770|SPON1_CHICK Spondin-1 OS=Gallus gallus
Align length 46
Score (bit) 32.7
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921164|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_E02.
(274 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9W770|SPON1_CHICK Spondin-1 OS=Gallus gallus GN=SPON1 PE=2 SV=1 33 0.58
sp|P35446|SPON1_RAT Spondin-1 OS=Rattus norvegicus GN=Spon1 PE=1... 32 0.99
sp|Q8VCC9|SPON1_MOUSE Spondin-1 OS=Mus musculus GN=Spon1 PE=2 SV=1 32 0.99
sp|Q9HCB6|SPON1_HUMAN Spondin-1 OS=Homo sapiens GN=SPON1 PE=1 SV=2 32 0.99
sp|Q9GLX9|SPON1_BOVIN Spondin-1 OS=Bos taurus GN=SPON1 PE=1 SV=1 32 0.99
sp|Q99396|CY42_TRYBB Receptor-type adenylate cyclase GRESAG 4.2 ... 30 2.9

>sp|Q9W770|SPON1_CHICK Spondin-1 OS=Gallus gallus GN=SPON1 PE=2 SV=1
Length = 802

Score = 32.7 bits (73), Expect = 0.58
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KDF + + WS I+ H K+ W Y +S V ++ + GSP
Sbjct: 215 HPKDFPRRTNHWSAIIGSSHSKNYILWEYGGYASEGVKQVAELGSP 260


>sp|P35446|SPON1_RAT Spondin-1 OS=Rattus norvegicus GN=Spon1 PE=1
SV=1
Length = 807

Score = 32.0 bits (71), Expect = 0.99
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + + WS I+ H K+ W Y +S V ++ + GSP
Sbjct: 220 HPKDYPRRANHWSAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSP 265


>sp|Q8VCC9|SPON1_MOUSE Spondin-1 OS=Mus musculus GN=Spon1 PE=2 SV=1
Length = 807

Score = 32.0 bits (71), Expect = 0.99
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + + WS I+ H K+ W Y +S V ++ + GSP
Sbjct: 220 HPKDYPRRANHWSAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSP 265


>sp|Q9HCB6|SPON1_HUMAN Spondin-1 OS=Homo sapiens GN=SPON1 PE=1 SV=2
Length = 807

Score = 32.0 bits (71), Expect = 0.99
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + + WS I+ H K+ W Y +S V ++ + GSP
Sbjct: 220 HPKDYPRRANHWSAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSP 265


>sp|Q9GLX9|SPON1_BOVIN Spondin-1 OS=Bos taurus GN=SPON1 PE=1 SV=1
Length = 807

Score = 32.0 bits (71), Expect = 0.99
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + + WS I+ H K+ W Y +S V ++ + GSP
Sbjct: 220 HPKDYPRRANHWSAIIGGSHSKNYVLWEYGGYASEGVKQVAELGSP 265


>sp|Q99396|CY42_TRYBB Receptor-type adenylate cyclase GRESAG 4.2
(Fragment) OS=Trypanosoma brucei brucei GN=GRESAG 4.2
PE=2 SV=1
Length = 572

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3

Query: 209 SLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSPWLIQLDWCSWAK 63
S+WS A R ++ + L +S S V +P + QLDWC W +
Sbjct: 188 SVWSMARALRSDEPV---LQDPMSPSMVYTVPNGNALTPAQLDWCGWCR 233


tr_hit_id O76822
Definition tr|O76822|O76822_BRAFL F-spondin OS=Branchiostoma floridae
Align length 46
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921164|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_E02.
(274 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|O76822|O76822_BRAFL F-spondin OS=Branchiostoma floridae GN=f-... 35 2.4
tr|B6LHD2|B6LHD2_BRAFL Putative uncharacterized protein OS=Branc... 35 2.4
tr|B6KZ33|B6KZ33_BRAFL Putative uncharacterized protein (Fragmen... 35 2.4
tr|Q4SPB7|Q4SPB7_TETNG Chromosome undetermined SCAF14539, whole ... 33 9.1

>tr|O76822|O76822_BRAFL F-spondin OS=Branchiostoma floridae
GN=f-spondin PE=2 SV=1
Length = 898

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + WS I+ H K W Y S+ V ++ +WGSP
Sbjct: 210 HPKDYPKYGTHWSAIIGATHSKDYTIWEYGGYSTEGVKQVAEWGSP 255


>tr|B6LHD2|B6LHD2_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_261593 PE=4 SV=1
Length = 814

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + WS I+ H K W Y S+ V ++ +WGSP
Sbjct: 126 HPKDYPKYGTHWSAIIGATHSKDYTIWEYGGYSTEGVKQVAEWGSP 171


>tr|B6KZ33|B6KZ33_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_199522 PE=4 SV=1
Length = 428

Score = 34.7 bits (78), Expect = 2.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + WS I+ H K W Y S+ V ++ +WGSP
Sbjct: 75 HPKDYPKYGTHWSAIIGATHSKDYSIWEYGGYSTEGVKQVAEWGSP 120


>tr|Q4SPB7|Q4SPB7_TETNG Chromosome undetermined SCAF14539, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00014915001 PE=4 SV=1
Length = 557

Score = 32.7 bits (73), Expect = 9.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3

Query: 236 YSKDFISKCSLWSCILAPRHEKHIPGWLYHAVSSSRVIELPQWGSP 99
+ KD+ + + WS ++ H K+ W Y +S V ++ ++GSP
Sbjct: 166 HPKDYPRRANHWSALIGASHSKNYMLWEYGGYASDGVRQVAEFGSP 211