BP921168
Clone id YMU001_000146_E06
Library
Length 260
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTAAGTCATCTAACTCTCCCTCTCATCCACAGACGGGAGCGTAAAGAAATATTGCCCATG
GCAATGAGGGAATAGCATGTTATTCAATATCTTATATAGCTGCCCATGGTTTGTCCCCTC
TGAAGGAGTGATGTAACCTGTAACTATGATTTCAAGCTGGAGAGCTTCTTTTTCTCCTGC
TTCTGTTGCTCTTGGTTGTGCTTGTGATTCTCCGGCCCTCAGTGACTAACCCTCATGTGC
AGCTCATCACCTCTTTGCAC
■■Homology search results ■■ -
sp_hit_id Q5QUD0
Definition sp|Q5QUD0|THIC_IDILO Thiamine biosynthesis protein thiC OS=Idiomarina loihiensis
Align length 30
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921168|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_E06.
(260 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5QUD0|THIC_IDILO Thiamine biosynthesis protein thiC OS=Idiom... 30 4.8

>sp|Q5QUD0|THIC_IDILO Thiamine biosynthesis protein thiC
OS=Idiomarina loihiensis GN=thiC PE=3 SV=1
Length = 568

Score = 29.6 bits (65), Expect = 4.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -3

Query: 120 EGTNHGQLYKILNNM--LFPHCHGQYFFTL 37
EG H ++KI NM HCHG F+TL
Sbjct: 382 EGPGHVPMHKIQENMDEQLKHCHGAPFYTL 411


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921168|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_E06.
(260 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******