BP921195
Clone id YMU001_000146_G10
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAACATGAAGGGGCTAAAGTGAGTCACAAACATGCTTTACCTTATTGTAAGCAACGCCAA
CTAGAATGAGACATTCTTGCTAACTGGATTGCTTGGTGCTAATGTACATGCTTTGCATAT
CCTTCATCACAAGAGTGCACTTGTAACGTGTAATATGCCTATCCTCTTTGGATTTTGACA
GTATTGAGATGTCGTTTGTCCCACGGTTTACAGAGAGTGATCCTATATGAGTGGTAAATG
AGGATCACAATATCATACAACATTGCTGAGCAAACCATCGTGGTTAACTTGAAATATCCA
CAAGCACCCAAATTGAGCCATGACCTCGATTGACAGATCCAAAAGTAATCACATAGAGAG
ATGACACATAAAGTGCAAAATGCTTCATAAAGAACAACTTGATCAATATGCATGCCGTTC
GAAATCAGCGTTTGCTAAACCCTAGGACCCATAACAACTAATGTGCTTGCATTTAGCAAA
AAATAGATCCAAACCTATATATCCATAATCGTCCTTGCCAATACTTATGGAAAATGTGGT
GCT
■■Homology search results ■■ -
sp_hit_id Q00578
Definition sp|Q00578|RAD25_YEAST DNA repair helicase RAD25 OS=Saccharomyces cerevisiae
Align length 77
Score (bit) 31.2
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921195|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_G10.
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q00578|RAD25_YEAST DNA repair helicase RAD25 OS=Saccharomyces... 31 3.4
sp|P25149|YWAF_BACSU Uncharacterized protein ywaF OS=Bacillus su... 30 5.8
sp|Q60997|DMBT1_MOUSE Deleted in malignant brain tumors 1 protei... 30 5.8
sp|P82795|LCR86_ARATH Putative low-molecular-weight cysteine-ric... 30 9.9

>sp|Q00578|RAD25_YEAST DNA repair helicase RAD25 OS=Saccharomyces
cerevisiae GN=RAD25 PE=1 SV=1
Length = 843

Score = 31.2 bits (69), Expect = 3.4
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = -3

Query: 259 CMIL*SSFTTHIGSLSVNRGTNDISILSKSKEDRHITRYKCTLVMKDMQSMYISTKQSS* 80
C+I SS H GS + +K + D + +LV KD Q MY STK+
Sbjct: 669 CLIQISS---HYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKR--- 722

Query: 79 QECLILVGVAYNKVKHV 29
Q L+ G A+ + H+
Sbjct: 723 QAFLVDQGYAFKVITHL 739


>sp|P25149|YWAF_BACSU Uncharacterized protein ywaF OS=Bacillus
subtilis GN=ywaF PE=4 SV=1
Length = 237

Score = 30.4 bits (67), Expect = 5.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3

Query: 397 LFFMKHFALYVSSLYVITFGSVNRGHGSIWVLV 299
LFF+ H ++++S L + G+ G S+WV V
Sbjct: 138 LFFISHGSVFLSCLLMAVIGTYRMGQRSLWVTV 170


>sp|Q60997|DMBT1_MOUSE Deleted in malignant brain tumors 1 protein
OS=Mus musculus GN=Dmbt1 PE=1 SV=2
Length = 2085

Score = 30.4 bits (67), Expect = 5.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2

Query: 350 DYFWICQSRSWLNLGACGYFKLTTMVCSA 264
DY W C R WL+ CG+ + ++CSA
Sbjct: 398 DYLWRCSHRGWLSHN-CGHHEDAGVICSA 425



Score = 30.4 bits (67), Expect = 5.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2

Query: 350 DYFWICQSRSWLNLGACGYFKLTTMVCSA 264
DY W C R WL+ CG+ + ++CSA
Sbjct: 537 DYLWRCSHRGWLSHN-CGHHEDAGVICSA 564



Score = 30.4 bits (67), Expect = 5.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2

Query: 350 DYFWICQSRSWLNLGACGYFKLTTMVCSA 264
DY W C R WL+ CG+ + ++CSA
Sbjct: 676 DYLWRCSHRGWLSHN-CGHHEDAGVICSA 703



Score = 30.4 bits (67), Expect = 5.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2

Query: 350 DYFWICQSRSWLNLGACGYFKLTTMVCSA 264
DY W C R WL+ CG+ + ++CSA
Sbjct: 815 DYLWRCSHRGWLSHN-CGHHEDAGVICSA 842


>sp|P82795|LCR86_ARATH Putative low-molecular-weight cysteine-rich
protein LCR86 OS=Arabidopsis thaliana GN=LCR86 PE=3 SV=1
Length = 85

Score = 29.6 bits (65), Expect = 9.9
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2

Query: 419 NGMHIDQVVLYEAFCTLCVISLCDYFWICQSRSWLNLGACGYFKLTTMVC 270
N + + + Y + CT S+CD IC S + N CG F+L T C
Sbjct: 26 NAIDVHDAMCYRSECT----SVCDQ--ICLSHGYTNGWYCGTFRLHTGCC 69


tr_hit_id B0ERF0
Definition tr|B0ERF0|B0ERF0_ENTDI Putative uncharacterized protein OS=Entamoeba dispar SAW760
Align length 126
Score (bit) 36.2
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921195|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_G10.
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0ERF0|B0ERF0_ENTDI Putative uncharacterized protein OS=Entam... 36 1.1
tr|Q8RK98|Q8RK98_MYCHO Putative uncharacterized protein OS=Mycop... 33 9.7
tr|B0D9Z5|B0D9Z5_LACBS Predicted protein OS=Laccaria bicolor (st... 33 9.7

>tr|B0ERF0|B0ERF0_ENTDI Putative uncharacterized protein
OS=Entamoeba dispar SAW760 GN=EDI_021390 PE=4 SV=1
Length = 630

Score = 36.2 bits (82), Expect = 1.1
Identities = 30/126 (23%), Positives = 48/126 (38%)
Frame = -2

Query: 428 LISNGMHIDQVVLYEAFCTLCVISLCDYFWICQSRSWLNLGACGYFKLTTMVCSAMLYDI 249
L++ GM I V+ + TLC++SLC F +C W N F + V +
Sbjct: 440 LLTVGMSI---VMGNSIITLCLVSLCILFTLCALAFWFNTKYNLSFNIIISVLVLFFVGV 496

Query: 248 VILIYHSYRITLCKPWDKRHLNTVKIQRG*AYYTLQVHSCDEGYAKHVH*HQAIQLARMS 69
I+I SY I YT ++ GY+ V+ ++ + +S
Sbjct: 497 AIVIGVSYLIQ-------------------PDYTCSINDNRTGYSLTVNLNEKVPKQLVS 537

Query: 68 HSSWRC 51
W C
Sbjct: 538 QLPWNC 543


>tr|Q8RK98|Q8RK98_MYCHO Putative uncharacterized protein
OS=Mycoplasma hominis PE=4 SV=1
Length = 337

Score = 33.1 bits (74), Expect = 9.7
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Frame = -2

Query: 491 WIYFLLNASTLVVMGPRV*QTLISNGMHIDQVVLYEAFCTLCVISLCDYFWICQSR---- 324
W+ F+LN S + + P + LI N ++ +++L + ++LC+ FWIC
Sbjct: 49 WLEFILNISLIPMQRPNY-KGLIENFLNYKKLILNNNY-----LNLCNSFWICSQEESCK 102

Query: 323 -SW--------LNLGACGYF 291
+W N +C YF
Sbjct: 103 LNWEDVNYFDHFNNDSCNYF 122


>tr|B0D9Z5|B0D9Z5_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_184863 PE=4 SV=1
Length = 769

Score = 33.1 bits (74), Expect = 9.7
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = -3

Query: 259 CMIL*SSFTTHIGSLSVNRGTNDISILSKSKEDRHITRYKCTLVMKDMQSMYISTKQSS* 80
C+I SS H GS + +K + D + +LV KD Q MY STK+
Sbjct: 571 CLIQISS---HFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKR--- 624

Query: 79 QECLILVGVAYNKVKHV 29
Q+ LI G A+ + H+
Sbjct: 625 QQFLIDQGYAFKVITHL 641