BP921198
Clone id YMU001_000146_H01
Library
Length 337
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTACACAAGCAACTCAGTGCATCCATCACATTGCCACAAAAGACACTGACAGATTACA
AATATAGCACAATCTTGAAACTCAAGATTGCTTGGATCAAATGCAGCAATGTAATGCTGC
AGGCAGCAAATAAGCAACCAGACTATGCCGCATTCCGGAAGAGACTGTCTCGTTACATAT
AACTTTCACAAAAAGGGAGCAACAGCCCCACACCTTCAAAATTTAGTTGATGATGATCAT
CTCTGAGTAACCGCCTCAGTGGGCCACCAAGAGCAGTCAAATCAAACACTTCACGTTGAT
ATACTCGGACCAAGCAGCGGTAATATTTCTTCAATAA
■■Homology search results ■■ -
sp_hit_id Q80WL2
Definition sp|Q80WL2|BYST_RAT Bystin OS=Rattus norvegicus
Align length 62
Score (bit) 32.3
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921198|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_H01.
(337 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q80WL2|BYST_RAT Bystin OS=Rattus norvegicus GN=Bysl PE=2 SV=3 32 0.76
sp|O54825|BYST_MOUSE Bystin OS=Mus musculus GN=Bysl PE=1 SV=3 32 1.3
sp|Q13895|BYST_HUMAN Bystin OS=Homo sapiens GN=BYSL PE=1 SV=3 32 1.3
sp|Q5E9N0|BYST_BOVIN Bystin OS=Bos taurus GN=BYSL PE=2 SV=1 32 1.3
sp|Q8BHB0|NOD1_MOUSE Nucleotide-binding oligomerization domain-c... 31 1.7
sp|Q6CKI3|RMD9_KLULA Protein RMD9, mitochondrial OS=Kluyveromyce... 30 4.9
sp|A9UNU6|BYST_MONBE Bystin OS=Monosiga brevicollis GN=bysl PE=3... 29 6.4
sp|P17214|EST1_YEAST Telomere elongation protein EST1 OS=Sacchar... 29 6.4

>sp|Q80WL2|BYST_RAT Bystin OS=Rattus norvegicus GN=Bysl PE=2 SV=3
Length = 436

Score = 32.3 bits (72), Expect = 0.76
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -1

Query: 208 GLLLPFCESYM*RDSLFRNAA*SGCLFAACSITLLHLIQAILSFKIVLYL*SVSVFCGNV 29
G+L+P CES R A G + + CSI +LH A+L + Y + S+F +
Sbjct: 288 GILIPLCES---GTCTLREAIIVGSIISKCSIPVLHSSAAMLKIAEMEYSGASSIFLRLL 344

Query: 28 MD 23
+D
Sbjct: 345 LD 346


>sp|O54825|BYST_MOUSE Bystin OS=Mus musculus GN=Bysl PE=1 SV=3
Length = 436

Score = 31.6 bits (70), Expect = 1.3
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1

Query: 208 GLLLPFCESYM*RDSLFRNAA*SGCLFAACSITLLHLIQAILSFKIVLYL*SVSVFCGNV 29
G+L+P CES R A G + CSI +LH A+L + Y + S+F +
Sbjct: 288 GILIPLCES---GTCTLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLL 344

Query: 28 MD 23
+D
Sbjct: 345 LD 346


>sp|Q13895|BYST_HUMAN Bystin OS=Homo sapiens GN=BYSL PE=1 SV=3
Length = 437

Score = 31.6 bits (70), Expect = 1.3
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1

Query: 208 GLLLPFCESYM*RDSLFRNAA*SGCLFAACSITLLHLIQAILSFKIVLYL*SVSVFCGNV 29
G+L+P CES R A G + CSI +LH A+L + Y + S+F +
Sbjct: 289 GILIPLCES---GTCTLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLL 345

Query: 28 MD 23
+D
Sbjct: 346 LD 347


>sp|Q5E9N0|BYST_BOVIN Bystin OS=Bos taurus GN=BYSL PE=2 SV=1
Length = 435

Score = 31.6 bits (70), Expect = 1.3
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1

Query: 208 GLLLPFCESYM*RDSLFRNAA*SGCLFAACSITLLHLIQAILSFKIVLYL*SVSVFCGNV 29
G+L+P CES R A G + CSI +LH A+L + Y + S+F +
Sbjct: 287 GILIPLCES---GTCTLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLL 343

Query: 28 MD 23
+D
Sbjct: 344 LD 345


>sp|Q8BHB0|NOD1_MOUSE Nucleotide-binding oligomerization
domain-containing protein 1 OS=Mus musculus GN=Nod1 PE=2
SV=1
Length = 953

Score = 31.2 bits (69), Expect = 1.7
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -3

Query: 152 CGI---VWLLICCLQHYIAAFDPSNLEFQDCAI 63
CG+ W++ C QH+ F+ S+ + DCA+
Sbjct: 388 CGVPLFCWIIFRCFQHFQTVFEGSSSQLPDCAV 420


>sp|Q6CKI3|RMD9_KLULA Protein RMD9, mitochondrial OS=Kluyveromyces
lactis GN=RMD9 PE=3 SV=1
Length = 664

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3

Query: 48 LTDYKYSTILKLKIAWIKCSNVMLQAANKQPDY--AAFRKRLSRYI 179
L +++ S +++L +K + L + NK+PDY +F K ++ Y+
Sbjct: 152 LNNHRASRVIQLMHVALKVNRTQLTSMNKKPDYDSQSFHKEMTNYL 197


>sp|A9UNU6|BYST_MONBE Bystin OS=Monosiga brevicollis GN=bysl PE=3
SV=1
Length = 414

Score = 29.3 bits (64), Expect = 6.4
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -1

Query: 208 GLLLPFCESYM*RDSLFRNAA*SGCLFAACSITLLHLIQAILSFKIVLYL*SVSVFCGNV 29
G LLP CE+ D R A G + SI +LH A+L + Y + S+F +
Sbjct: 265 GFLLPLCEA---GDCTLREAVIIGGILVRKSIPVLHSSAAMLKMAEMPYSGATSIFLRVL 321

Query: 28 MD 23
+D
Sbjct: 322 LD 323


>sp|P17214|EST1_YEAST Telomere elongation protein EST1
OS=Saccharomyces cerevisiae GN=EST1 PE=1 SV=2
Length = 699

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3

Query: 39 QKTLTDYKYSTILKLKIAWIKCSNVMLQAANK 134
QK + D++Y I++L + WIK +LQ ++
Sbjct: 424 QKNMEDFRYLAIIRLLMCWIKSYRSILQYTHR 455


tr_hit_id B8QQ60
Definition tr|B8QQ60|B8QQ60_9TELE RNF213 (Fragment) OS=Hoplostethus atlanticus
Align length 53
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921198|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_H01.
(337 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8QQ60|B8QQ60_9TELE RNF213 (Fragment) OS=Hoplostethus atlanti... 35 1.9
tr|B8QQC0|B8QQC0_SYNVE RNF213 (Fragment) OS=Synanceia verrucosa ... 35 2.5
tr|B8QQB5|B8QQB5_9PERO RNF213 (Fragment) OS=Sillago sihama GN=RN... 35 2.5
tr|B8QQA2|B8QQA2_9PERC RNF213 (Fragment) OS=Psettodes belcheri G... 35 2.5
tr|B8QQ95|B8QQ95_9TELE RNF213 (Fragment) OS=Photoblepharon palpe... 35 2.5
tr|B8QQ78|B8QQ78_9PERC RNF213 (Fragment) OS=Mola mola GN=RNF213 ... 34 3.2
tr|B3SA57|B3SA57_TRIAD Putative uncharacterized protein OS=Trich... 33 5.5
tr|B8QQ57|B8QQ57_9PERC RNF213 (Fragment) OS=Gnathanodon speciosu... 33 7.2
tr|B8QQ50|B8QQ50_ECHNA RNF213 (Fragment) OS=Echeneis naucrates G... 33 7.2
tr|B8QQ40|B8QQ40_9PERC RNF213 (Fragment) OS=Chloroscombrus chrys... 33 7.2
tr|B6HNR0|B6HNR0_PENCH Pc21g13850 protein OS=Penicillium chrysog... 33 7.2
tr|B8QQ99|B8QQ99_9PERO RNF213 (Fragment) OS=Pomadasys perotaei G... 33 9.3
tr|B8QQ74|B8QQ74_9PERO RNF213 (Fragment) OS=Mene maculata GN=RNF... 33 9.3
tr|B8QQ28|B8QQ28_BOTPO RNF213 (Fragment) OS=Bothus podas GN=RNF2... 33 9.3
tr|Q8F602|Q8F602_LEPIN Putative uncharacterized protein OS=Lepto... 33 9.4
tr|Q72Q61|Q72Q61_LEPIC Putative uncharacterized protein OS=Lepto... 33 9.4

>tr|B8QQ60|B8QQ60_9TELE RNF213 (Fragment) OS=Hoplostethus atlanticus
GN=RNF213 PE=4 SV=1
Length = 317

Score = 35.0 bits (79), Expect = 1.9
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + KK + PH +DDH+ +T +G Q N+ HVD + P+SG +
Sbjct: 33 LAPFLIRKKWESEPHPYIFFNDDHVSMTF-IGFHLQPNEQNHVDAIDPTSGRV 84


>tr|B8QQC0|B8QQC0_SYNVE RNF213 (Fragment) OS=Synanceia verrucosa
GN=RNF213 PE=4 SV=1
Length = 328

Score = 34.7 bits (78), Expect = 2.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + K+ T PH +DDH+ +T +G Q NQ VD++ P+SG +
Sbjct: 39 LAPFLIRKRWETEPHPYIFFNDDHMSMTF-IGFHLQPNQQNSVDVIEPTSGKV 90


>tr|B8QQB5|B8QQB5_9PERO RNF213 (Fragment) OS=Sillago sihama
GN=RNF213 PE=4 SV=1
Length = 328

Score = 34.7 bits (78), Expect = 2.5
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + K+ T PH +DDH+ +T +G Q N+ HVD + P SG +
Sbjct: 39 LAPFLMRKRWETEPHPYIFFNDDHVSMT-FIGFHLQPNEQNHVDAIDPHSGRV 90


>tr|B8QQA2|B8QQA2_9PERC RNF213 (Fragment) OS=Psettodes belcheri
GN=RNF213 PE=4 SV=1
Length = 328

Score = 34.7 bits (78), Expect = 2.5
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + KK T PH +DDH+ +T +G Q NQ VD + PSSG +
Sbjct: 39 LAPFLIRKKWETEPHPYIFFNDDHVSMT-FIGFHLQPNQENFVDAVEPSSGRV 90


>tr|B8QQ95|B8QQ95_9TELE RNF213 (Fragment) OS=Photoblepharon
palpebratum GN=RNF213 PE=4 SV=1
Length = 322

Score = 34.7 bits (78), Expect = 2.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + KK + PH +DDH+ +T +G Q N+ HVD + P+SG +
Sbjct: 33 LAPFLIRKKWESEPHPYIFFNDDHVSMTF-IGFHLQLNEQNHVDAIDPTSGRV 84


>tr|B8QQ78|B8QQ78_9PERC RNF213 (Fragment) OS=Mola mola GN=RNF213
PE=4 SV=1
Length = 328

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + K+ T PH +DDH+ +T +G Q N+ +VD + PSSG I
Sbjct: 39 LAPFLIRKRWETEPHPYIFFNDDHVSMTF-IGFHLQPNEQNYVDAIEPSSGKI 90


>tr|B3SA57|B3SA57_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_61141 PE=4 SV=1
Length = 443

Score = 33.5 bits (75), Expect = 5.5
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -1

Query: 208 GLLLPFCESYM*RDSLFRNAA*SGCLFAACSITLLHLIQAILSFKIVLYL*SVSVFCGNV 29
G+LLP CE+ R+ R A G + SIT LH AIL + Y + S+F +
Sbjct: 294 GILLPLCEA---RNCSLREAVIIGSILNKTSITSLHACAAILKLTELEYTGANSIFIRIL 350

Query: 28 MD 23
+D
Sbjct: 351 LD 352


>tr|B8QQ57|B8QQ57_9PERC RNF213 (Fragment) OS=Gnathanodon speciosus
GN=RNF213 PE=4 SV=1
Length = 328

Score = 33.1 bits (74), Expect = 7.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + K+ T PH +DDH+ +T +G Q N+ VD + P+SG +
Sbjct: 39 LAPFKIRKRWETEPHPYIFFNDDHVSMT-FIGFHLQPNEENFVDAIDPTSGRV 90


>tr|B8QQ50|B8QQ50_ECHNA RNF213 (Fragment) OS=Echeneis naucrates
GN=RNF213 PE=4 SV=1
Length = 328

Score = 33.1 bits (74), Expect = 7.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + K+ T PH +DDH+ +T +G Q N+ +VD + P+SG +
Sbjct: 39 LAPFLIRKRWETEPHPYIFFNDDHVSMTF-IGFHLQPNERKYVDAIEPASGKV 90


>tr|B8QQ40|B8QQ40_9PERC RNF213 (Fragment) OS=Chloroscombrus
chrysurus GN=RNF213 PE=4 SV=1
Length = 328

Score = 33.1 bits (74), Expect = 7.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1

Query: 169 LVTYNFHKKGATAPHLQNLVDDDHL*VTASVGHQEQSNQTLHVDILGPSSGNI 327
L + K+ T PH +DDH+ +T +G Q N+ VD + P+SG +
Sbjct: 39 LAPFKIRKRWETEPHPYIFFNDDHVSMT-FIGFHLQPNEQNFVDAIDPTSGRV 90