BP921201 |
Clone id |
YMU001_000146_H06 |
Library |
YMU01 |
Length |
392 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000146_H06. |
Accession |
BP921201 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL859Contig1 |
Sequence |
CTCACAAGTCACAGCAAGGCTCAGTTGAGGACCACCGGACTCTCTCCTCAACGATGTTAC GCTGGAAGCTTGGAGACCATATCCTGGTGTGTTCGTGAAGTAAGGACTCATTAAATTAGC TGGCTCATTGGGGCAGTAGGTCGGAGCAGAGCATCCATTGTTGCCTCTACTACTGCTGGT GGTGGCTGCCATATCTATCCTGCAAATTCCATAATGAGGTCCAATAATTGCATGATGTTG GGTATCTCCATTTATATGCTGAGCAACAAGGGAGGGAGTTCTGCTGATTTCCTTGACGGC ATGGCCGGATGGTGCGGCAGTCGAGCTCGAGCTGCCCAAGCTGAGAGTGGACGAGGAGGA GCTCTGCTCTTGTTTCTCAAGCTGGGTACTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RHP9 |
Definition |
sp|Q5RHP9|CA173_HUMAN Uncharacterized protein C1orf173 OS=Homo sapiens |
Align length |
31 |
Score (bit) |
32.3 |
E-value |
0.76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q1DBJ6 |
Definition |
tr|Q1DBJ6|Q1DBJ6_MYXXD Transcriptional regulator, LysR family OS=Myxococcus xanthus (strain DK 1622) |
Align length |
83 |
Score (bit) |
37.7 |
E-value |
0.29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921201|Adiantum capillus-veneris mRNA, clone: YMU001_000146_H06. (392 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q1DBJ6|Q1DBJ6_MYXXD Transcriptional regulator, LysR family OS... 38 0.29 tr|B7Q1A2|B7Q1A2_IXOSC Putative uncharacterized protein OS=Ixode... 36 1.1 tr|B5JZB3|B5JZB3_9RHOB Putative uncharacterized protein OS=Octad... 34 4.2 tr|Q4FX38|Q4FX38_LEIMA Putative uncharacterized protein OS=Leish... 34 4.2 tr|B1XWZ2|B1XWZ2_LEPCP Putative uncharacterized protein OS=Lepto... 33 5.4 tr|A7Y2G9|A7Y2G9_PIG Tumor necrosis factor receptor 2 isoform OS... 33 7.1 tr|A7Y2G6|A7Y2G6_PIG Tumor necrosis factor receptor 2 OS=Sus scr... 33 7.1 tr|B6KGY9|B6KGY9_TOXGO Putative uncharacterized protein OS=Toxop... 33 7.1 tr|A6W500|A6W500_KINRD Putative uncharacterized protein OS=Kineo... 33 9.3 tr|A5EQP1|A5EQP1_BRASB Putative uncharacterized protein OS=Brady... 33 9.3 tr|A1YPR7|A1YPR7_PIG Tumor necrosis factor receptor 2 OS=Sus scr... 33 9.3
>tr|Q1DBJ6|Q1DBJ6_MYXXD Transcriptional regulator, LysR family OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_1726 PE=4 SV=1 Length = 293
Score = 37.7 bits (86), Expect = 0.29 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 10/83 (12%) Frame = +1
Query: 118 SWLIGAVGRSRASIVASTTAGGGCHIYPANSIMRSNNCM----------MLGISIYMLSN 267 +W IG S AS+ A+ +AG G + PA+S+ + + L +++Y SN Sbjct: 208 AWRIGYSSASLASLCAAVSAGLGVSLLPASSVQAGHRVLGEKDGFPVVDGLELALYARSN 267
Query: 268 KGGSSADFLDGMAGWCGSRARAA 336 G D ++ C RA AA Sbjct: 268 LGAVGRTLRDELSDLCTQRAEAA 290
>tr|B7Q1A2|B7Q1A2_IXOSC Putative uncharacterized protein OS=Ixodes scapularis GN=IscW_ISCW008863 PE=4 SV=1 Length = 446
Score = 35.8 bits (81), Expect = 1.1 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 12/90 (13%) Frame = -3
Query: 240 QHHAIIGPHYGICRIDMAATTSSSRGNN------GCSAPTYCPNEPANLMSPYFTNTP-- 85 + HA++G Y D A + ++ G N G + P+ AN +SP T + Sbjct: 187 KEHAMVGRVYSF---DAATSLKNAPGQNTRRPLPGYPSVCTAPSSTANSLSPLGTRSAQS 243
Query: 84 ----GYGLQASSVTSLRRESGGPQLSLAVT 7 G G AS+ SL++ +GGP +AVT Sbjct: 244 PDSGGTGGPASAAASLQQHNGGPMTLVAVT 273
>tr|B5JZB3|B5JZB3_9RHOB Putative uncharacterized protein OS=Octadecabacter antarcticus 238 GN=OA238_5079 PE=4 SV=1 Length = 455
Score = 33.9 bits (76), Expect = 4.2 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = -2
Query: 334 QLELDCRTIRPCRQGNQQNSLPCCSAYKWRYPTSCNYWTSLWNLQDRYGSH 182 ++EL ++R ++G + +L + Y RYPT WT+L +L G H Sbjct: 6 RVELRISSVRAHQEGRLREALDGYTRYLERYPTDAGVWTNLGSLYRTMGRH 56
>tr|Q4FX38|Q4FX38_LEIMA Putative uncharacterized protein OS=Leishmania major strain Friedlin GN=LMJ_1010 PE=4 SV=1 Length = 779
Score = 33.9 bits (76), Expect = 4.2 Identities = 26/81 (32%), Positives = 32/81 (39%) Frame = -1
Query: 371 KSRAPPRPLSAWAARARLPHHPAMPSRKSAELPPLLLSI*MEIPNIMQLLDLIMEFAG*I 192 K +PPR L A R PH S +A PP+ LS Sbjct: 114 KHASPPR-LKASQKRFTSPHSSVTTSETAAGQPPVRLS---------------------- 150
Query: 191 WQPPPAVVEATMDALLRPTAP 129 PPP V+E T+D RP+AP Sbjct: 151 --PPPRVLEETVDKRCRPSAP 169
>tr|B1XWZ2|B1XWZ2_LEPCP Putative uncharacterized protein OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=Lcho_0363 PE=4 SV=1 Length = 372
Score = 33.5 bits (75), Expect = 5.4 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = -2
Query: 370 RAELLLVHSQLGQLELDCRTIRPCRQGNQQNSLPCCSAYKWRYPTSCNYWTSL 212 RAE +VH++LG+LEL R + R ++ + P +A+ W +Y+ +L Sbjct: 25 RAERAVVHARLGELELARREVAILRGLSETQTSPALNAWLWLAEGLADYYENL 77
>tr|A7Y2G9|A7Y2G9_PIG Tumor necrosis factor receptor 2 isoform OS=Sus scrofa GN=TNFR2 PE=2 SV=1 Length = 411
Score = 33.1 bits (74), Expect = 7.1 Identities = 25/96 (26%), Positives = 39/96 (40%) Frame = -3
Query: 291 EISRTPSLVAQHINGDTQHHAIIGPHYGICRIDMAATTSSSRGNNGCSAPTYCPNEPANL 112 ++ P+ A+ + G Q H + A ++SSS + SAP P+ L Sbjct: 249 KVPHLPAKKARSVPGPEQQHLLT----------TAPSSSSSSLESSASAPDRRAPTPSQL 298
Query: 111 MSPYFTNTPGYGLQASSVTSLRRESGGPQLSLAVTC 4 +P T G G +S +S SG + VTC Sbjct: 299 QAPGADKTSGSGEARASSSSSESSSGSHGTQVNVTC 334
>tr|A7Y2G6|A7Y2G6_PIG Tumor necrosis factor receptor 2 OS=Sus scrofa GN=TNFR2 PE=2 SV=1 Length = 461
Score = 33.1 bits (74), Expect = 7.1 Identities = 25/96 (26%), Positives = 39/96 (40%) Frame = -3
Query: 291 EISRTPSLVAQHINGDTQHHAIIGPHYGICRIDMAATTSSSRGNNGCSAPTYCPNEPANL 112 ++ P+ A+ + G Q H + A ++SSS + SAP P+ L Sbjct: 299 KVPHLPAKKARSVPGPEQQHLLT----------TAPSSSSSSLESSASAPDRRAPTPSQL 348
Query: 111 MSPYFTNTPGYGLQASSVTSLRRESGGPQLSLAVTC 4 +P T G G +S +S SG + VTC Sbjct: 349 QAPGADKTSGSGEARASSSSSESSSGSHGTQVNVTC 384
>tr|B6KGY9|B6KGY9_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_047450 PE=4 SV=1 Length = 2303
Score = 33.1 bits (74), Expect = 7.1 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = +1
Query: 241 GISIYMLSNKGGSSADFLDGMAGWCGSRARAAQAESGRGG 360 GISI L+ +GGSS D++DG G R R+ S R G Sbjct: 924 GISI-RLAGRGGSSRDYMDGRGPGSGGRGRSPSPHSRRRG 962
>tr|A6W500|A6W500_KINRD Putative uncharacterized protein OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=Krad_0399 PE=4 SV=1 Length = 157
Score = 32.7 bits (73), Expect = 9.3 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = -3
Query: 234 HAIIGP--HYGICRIDMAATTSSSRGNNGCSAPTYCPNEPANLMSPYFTNTP 85 H + GP +G+ + AA T S +G + P P E LMS YF TP Sbjct: 12 HRLPGPDLRHGVVAVRRAAATLRSAPRSGRAYPRRVPFERLRLMSDYFAPTP 63
>tr|A5EQP1|A5EQP1_BRASB Putative uncharacterized protein OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=BBta_6581 PE=4 SV=1 Length = 466
Score = 32.7 bits (73), Expect = 9.3 Identities = 18/70 (25%), Positives = 33/70 (47%) Frame = +1
Query: 151 ASIVASTTAGGGCHIYPANSIMRSNNCMMLGISIYMLSNKGGSSADFLDGMAGWCGSRAR 330 A++ +T AG G ++Y + +NC++ G+++ +S SA DG G Sbjct: 248 AALSCATMAGSG-YVYWVGNHANPSNCVVTGVNVTAISITNCGSAHQFDGFTVTAGGTFA 306
Query: 331 AAQAESGRGG 360 + A+ G G Sbjct: 307 GSGAQDGMNG 316
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