BP921204 |
Clone id |
YMU001_000146_H09 |
Library |
YMU01 |
Length |
436 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000146_H09. |
Accession |
BP921204 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2657Contig1 |
Sequence |
AAAACGATAACGAATAAGTTACAGCTGACTGTTAATTGATGTTTGTACAAAACCATCAGT TAAAATATGATAGTAACTAAAAGGCCATCTTACTTTGTATCTTTGCAATATGAAGAAACA AAATGCGTCAAGTAGCAGTTGAGACTGGTAACTTTGAATGTACTGTTAAAACAAATTTGA GATGGTTAGTAAAAAGGTTGCATAGCAGGGAATTACCAGACTCACGCGATAGCCACAGAA TGACTATCAAGTAAACCGACCGGAGCCACTGCATTTATGGCTGCACCTCTTCTCATCAGT TCGTGATCCAAAAACACCACAATAACTGTGATATCGTCATGAAAATGACGTCTCACGCCT CTCTTGATCTTTTTCAAGTCTGCATAACGCACTTCTCGCTTCCTCGCCGCTACTTTCAGT GCAGCTTTTACAAGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5Z8P0 |
Definition |
sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica |
Align length |
35 |
Score (bit) |
58.5 |
E-value |
1.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SV72 |
Definition |
tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
38 |
Score (bit) |
64.3 |
E-value |
3.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921204|Adiantum capillus-veneris mRNA, clone: YMU001_000146_H09. (436 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella paten... 64 3e-09 tr|A9TD47|A9TD47_PHYPA Predicted protein OS=Physcomitrella paten... 64 5e-09 tr|B8LQT5|B8LQT5_PICSI Putative uncharacterized protein OS=Picea... 63 8e-09 tr|Q9ZSQ7|Q9ZSQ7_MESCR Protein phosphatase 2C homolog OS=Mesembr... 62 1e-08 tr|Q9SZN2|Q9SZN2_ARATH Putative uncharacterized protein F20M13.8... 60 5e-08 tr|Q9M3V0|Q9M3V0_FAGSY Protein phosphatase 2C (PP2C) OS=Fagus sy... 60 5e-08 tr|Q8W4N8|Q8W4N8_ARATH Putative uncharacterized protein At4g3852... 60 5e-08 tr|Q5PNS9|Q5PNS9_ARATH At4g38520 OS=Arabidopsis thaliana PE=2 SV=1 60 5e-08 tr|A7Q409|A7Q409_VITVI Chromosome chr13 scaffold_48, whole genom... 60 5e-08 tr|A7P8E3|A7P8E3_VITVI Chromosome chr3 scaffold_8, whole genome ... 60 5e-08 tr|A5C806|A5C806_VITVI Putative uncharacterized protein OS=Vitis... 60 5e-08 tr|A7PVW6|A7PVW6_VITVI Chromosome chr8 scaffold_34, whole genome... 60 7e-08 tr|B7FLN0|B7FLN0_MEDTR Putative uncharacterized protein OS=Medic... 59 9e-08 tr|B7FJF3|B7FJF3_MEDTR Putative uncharacterized protein OS=Medic... 59 9e-08 tr|B6SYG9|B6SYG9_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1 59 1e-07 tr|B6SV58|B6SV58_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1 59 1e-07 tr|A5B0L3|A5B0L3_VITVI Putative uncharacterized protein OS=Vitis... 59 1e-07 tr|Q9LHJ9|Q9LHJ9_ARATH Protein phosphatase 2C (Putative uncharac... 59 2e-07 tr|Q9C7B3|Q9C7B3_ARATH Protein phosphatase 2C, putative; 16828-1... 59 2e-07 tr|B8B2J1|B8B2J1_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A9TNG1|A9TNG1_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07 tr|A3BFG0|A3BFG0_ORYSJ Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|O82479|O82479_MESCR Protein phosphatase-2c (Fragment) OS=Mese... 58 2e-07 tr|A7PSU5|A7PSU5_VITVI Chromosome chr8 scaffold_29, whole genome... 58 2e-07 tr|B6T5D8|B6T5D8_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1 58 3e-07 tr|Q9LSN8|Q9LSN8_ARATH Protein phosphatase 2C-like protein OS=Ar... 57 4e-07 tr|Q8LEW2|Q8LEW2_ARATH Protein phosphatase-2c, putative OS=Arabi... 57 4e-07 tr|Q0V7V2|Q0V7V2_ARATH At3g17090 OS=Arabidopsis thaliana PE=2 SV=1 57 4e-07 tr|B7ZYA2|B7ZYA2_MAIZE Putative uncharacterized protein OS=Zea m... 57 4e-07 tr|B4F9M4|B4F9M4_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1 57 4e-07
>tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107052 PE=4 SV=1 Length = 371
Score = 64.3 bits (155), Expect = 3e-09 Identities = 27/38 (71%), Positives = 34/38 (89%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAIN 273 Y+DLKKI+RG+RRHFHDDITV+VVFLDH L+ G+ I+ Sbjct: 321 YSDLKKIERGIRRHFHDDITVVVVFLDHNLVSNGSGIS 358
>tr|A9TD47|A9TD47_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193911 PE=4 SV=1 Length = 371
Score = 63.5 bits (153), Expect = 5e-09 Identities = 26/38 (68%), Positives = 34/38 (89%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAIN 273 Y+DLKKI+RG+RRHFHDDITV+VVFLDH L+ G++ + Sbjct: 321 YSDLKKIERGIRRHFHDDITVVVVFLDHNLLSNGSSFS 358
>tr|B8LQT5|B8LQT5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 209
Score = 62.8 bits (151), Expect = 8e-09 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 4/56 (7%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELM----RRGAAINAVAPVGLLDSHSVA 231 Y+DLKKI RGVRRHFHDDITVIVVFLDH L+ RG I+ + + S+S+A Sbjct: 144 YSDLKKIDRGVRRHFHDDITVIVVFLDHSLISKFSSRGPTISIIGGGTTVPSNSLA 199
>tr|Q9ZSQ7|Q9ZSQ7_MESCR Protein phosphatase 2C homolog OS=Mesembryanthemum crystallinum GN=PP2C PE=2 SV=1 Length = 396
Score = 62.0 bits (149), Expect = 1e-08 Identities = 27/37 (72%), Positives = 33/37 (89%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAI 276 Y+DLKKI RGVRRHFHDDITV+VVFLD L+ RG+++ Sbjct: 329 YSDLKKIDRGVRRHFHDDITVVVVFLDSNLISRGSSV 365
>tr|Q9SZN2|Q9SZN2_ARATH Putative uncharacterized protein F20M13.80 (Putative uncharacterized protein AT4g38520) OS=Arabidopsis thaliana GN=F20M13.80 PE=2 SV=1 Length = 395
Score = 60.1 bits (144), Expect = 5e-08 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAINAVA 264 Y+DLKKI RGVRRHFHDDITVIVVF D L+ RG+ + A Sbjct: 325 YSDLKKIDRGVRRHFHDDITVIVVFFDTNLVSRGSMLRGPA 365
>tr|Q9M3V0|Q9M3V0_FAGSY Protein phosphatase 2C (PP2C) OS=Fagus sylvatica GN=pp2C2 PE=2 SV=1 Length = 397
Score = 60.1 bits (144), Expect = 5e-08 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAI 276 Y+DLKKI RGVRRHFHDDITVIVVFLD L+ R +++ Sbjct: 330 YSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSV 366
>tr|Q8W4N8|Q8W4N8_ARATH Putative uncharacterized protein At4g38520; F20M13.80 OS=Arabidopsis thaliana GN=At4g38520/F20M13.80 PE=2 SV=1 Length = 400
Score = 60.1 bits (144), Expect = 5e-08 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAINAVA 264 Y+DLKKI RGVRRHFHDDITVIVVF D L+ RG+ + A Sbjct: 330 YSDLKKIDRGVRRHFHDDITVIVVFFDTNLVSRGSMLRGPA 370
>tr|Q5PNS9|Q5PNS9_ARATH At4g38520 OS=Arabidopsis thaliana PE=2 SV=1 Length = 400
Score = 60.1 bits (144), Expect = 5e-08 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAINAVA 264 Y+DLKKI RGVRRHFHDDITVIVVF D L+ RG+ + A Sbjct: 330 YSDLKKIDRGVRRHFHDDITVIVVFFDTNLVSRGSMLRGPA 370
>tr|A7Q409|A7Q409_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029494001 PE=4 SV=1 Length = 385
Score = 60.1 bits (144), Expect = 5e-08 Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 4/54 (7%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELM----RRGAAINAVAPVGLLDSHS 237 Y+DLKKI+RGVRRHFHDDITV+V+FLD+ L+ RG +++ +A G+ + S Sbjct: 331 YSDLKKIERGVRRHFHDDITVVVLFLDYSLISRNSNRGPSLSIIAGGGVFANGS 384
>tr|A7P8E3|A7P8E3_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036147001 PE=4 SV=1 Length = 397
Score = 60.1 bits (144), Expect = 5e-08 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = -3
Query: 386 YADLKKIKRGVRRHFHDDITVIVVFLDHELMRRGAAI 276 Y+DLKKI RGVRRHFHDDITVIVVFLD L+ R +++ Sbjct: 330 YSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSV 366
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