BP921205
Clone id YMU001_000146_H10
Library
Length 488
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000146_H10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAATGGCAGCAGATGCAGACATGCGAATGAGTACGGACTCTGGAAAGTAGCTCTCTTCT
GTGGAATGACTTACGCAGAGGGCAAGCTGATGGAGATGGTGACAATGGAAGAACTTGAGC
ACGCGAGATCAAGTCCACAAGAATCTCTGACAGATCTTGTGCTCTGACATGACCGTAGTT
TTCGATCTCGCAAGGCCTTTCTCCTCCCCTTTGTTAGCGTTACCAGCCCTGCCATCTGAC
CTAGCTATGGCAGTGATGAGCTTGATTCCGGTCACAGATAGAAGAGGAGATGGCCAAAGC
CCTCTTTTCATGCTTCAATCTGAAAAAGTTTGAGATGATGATGCTGATGTTGCAACAGTC
CTGGGAGTCTGGCGGGAAGCAATTGGAAAAGAAAGACAAGCACAGGAATTTTGCTAGGGC
AAATGCAGAGACAGAGATGGTGCTCTTGGAACAAGTAAAGATGTAAGTAGAACATTCATG
GTACTTCT
■■Homology search results ■■ -
sp_hit_id Q40731
Definition sp|Q40731|STAD_ORYSJ Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Oryza sativa subsp. japonica
Align length 31
Score (bit) 29.6
E-value 7.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921205|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_H10.
(488 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40731|STAD_ORYSJ Acyl-[acyl-carrier-protein] desaturase, chl... 30 7.6

>sp|Q40731|STAD_ORYSJ Acyl-[acyl-carrier-protein] desaturase,
chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0379900 PE=2 SV=1
Length = 390

Score = 29.6 bits (65), Expect = 7.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3

Query: 3 NGSRCRHANEYGLWKVALFCGMTYAEGKLME 95
+G+ RHA EYG K+A CG A+ K E
Sbjct: 230 HGNTARHAKEYGDLKLAQICGTIAADEKRHE 260


tr_hit_id B4LX46
Definition tr|B4LX46|B4LX46_DROVI GJ23485 OS=Drosophila virilis
Align length 80
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921205|Adiantum capillus-veneris mRNA, clone:
YMU001_000146_H10.
(488 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4LX46|B4LX46_DROVI GJ23485 OS=Drosophila virilis GN=GJ23485 ... 33 9.3

>tr|B4LX46|B4LX46_DROVI GJ23485 OS=Drosophila virilis GN=GJ23485
PE=4 SV=1
Length = 403

Score = 32.7 bits (73), Expect = 9.3
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = -1

Query: 290 SPLLSVTGIKLITAIARSDGRAGNANKGEEKGLARSKTTVMSEHKICQRFLWT*SRVLKF 111
S L+S T I+ + + + +GN +K E+ A+ S +K+ Q+F W +
Sbjct: 68 SKLISFTHIRRVEFMEQV---SGNLSKALERWEAKGNAIWQSANKLQQKFQWNDEQARSL 124

Query: 110 FHCHHLHQLALCVSHSTEES 51
H + L L + ST ES
Sbjct: 125 EEMHSMLALLLASNQSTRES 144