BP921210
Clone id YMU001_000147_A06
Library
Length 509
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGCCTAAAGGTTTACCACTTGGCAGATAATATATGTTGTGTTGCACATCCCATGTAGATG
GTAAACCAGTATGTAAGTCATTAAAAAAAACATTGATGTATTCTTGAAGAAACTCCTTCC
CTTGCAGAGGCATCTTTAACTTGAGTATCCCTGACTTTGGTGTCGTGCCTGTTAATCAAT
GCTACCTTCTAACAATGTGACATGGCCATTTGTGGAAGATTGAGCTTCTTAACTGAATTA
TAGTTAAGAAAATTCGTGATTTTCTCAAAAAGAAGGAAATTTGCTATAGTTAAGAAAATT
CATGATTTTCTTGAAAAAAAGGAACTTTGCTACAATTCTCTTGAATTTGTTGTAGCTTGT
TATGATTTCAATGAGGAACTTGGGAATCAATCTACGTGCACATTGTTATGCCCTTGTCTG
CACACAAATAACTACTTAAAAAAGATGGGCCTTCATTCTAACACAAATAATTAAACATCA
AGTACTTTAGTACACAATGTGATTTGCAC
■■Homology search results ■■ -
sp_hit_id Q6TND0
Definition sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii
Align length 28
Score (bit) 30.8
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921210|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_A06.
(509 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1 31 3.9
sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1 31 3.9
sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorgh... 30 6.6
sp|Q07606|T4BB_BACCO Restriction enzyme BgcI subunit beta OS=Bac... 30 8.6

>sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1
Length = 512

Score = 30.8 bits (68), Expect = 3.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3

Query: 369 EIITSYNKFKRIVAKFLFFKKIMNFLNY 286
E+I SYNK + I A F FF+ +LNY
Sbjct: 122 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 149


>sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1
Length = 509

Score = 30.8 bits (68), Expect = 3.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3

Query: 369 EIITSYNKFKRIVAKFLFFKKIMNFLNY 286
E+I SYNK + I A F FF+ +LNY
Sbjct: 119 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 146


>sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorghum
bicolor PE=1 SV=2
Length = 960

Score = 30.0 bits (66), Expect = 6.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1

Query: 262 FSKRRKFAIVKKIHDFLEKKELCYNSL 342
FS+ + A+ KI +FLE ELCY SL
Sbjct: 388 FSEISEDAVFTKIEEFLEPLELCYKSL 414


>sp|Q07606|T4BB_BACCO Restriction enzyme BgcI subunit beta
OS=Bacillus coagulans GN=bcgIB PE=1 SV=1
Length = 341

Score = 29.6 bits (65), Expect = 8.6
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = -2

Query: 145 LKLKMPLQGKEFLQEYINVFFNDLHTGLPSTWDVQHN 35
LK+ +P++G+E +Y+N + + + + + +DVQ N
Sbjct: 131 LKILLPIKGEEPDWDYMNTYISKILSNMEKNFDVQQN 167


tr_hit_id Q3LWD7
Definition tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein OS=Bigelowiella natans
Align length 95
Score (bit) 33.5
E-value 6.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921210|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_A06.
(509 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein OS=Bigel... 33 6.1

>tr|Q3LWD7|Q3LWD7_BIGNA Putative uncharacterized protein
OS=Bigelowiella natans PE=4 SV=1
Length = 500

Score = 33.5 bits (75), Expect = 6.1
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = -1

Query: 407 NNVHVD*FPSSSLKS*QATTNSREL*QSSFFSRKS*IF----LTIANFLLFEKITNFLNY 240
N++ + F + +K + TN + + ++ FFS+ + I+ LLF+K +N +N+
Sbjct: 175 NSLKLIDFIINRIKYYKNKTNIKNIFRNVFFSKYKNWYSHNSFFISKGLLFQKYSNHINF 234

Query: 239 NSVKKLNLPQMAMSHC*KVALINRHDTKVRDTQVK 135
K N P + + +LIN+ D+K +D+ +K
Sbjct: 235 KRTSKSN-PSIIII---PTSLINKKDSKFKDSSIK 265