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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921212
Clone id YMU001_000147_A09
Library
Length 361
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGCATCCATAACTTTGCTGCGTATGTGAAGGGGTGTTATGACATCCTTTAAAGAGCCAGA
ATCAGCTTTTCTTTTCCCTTGCCTCACCAGCACGCTAAGCGGGCAACCAGACTTCAACTT
GGACAATGCTTCACCCTCCTCCAGGACGGATGGCAAATATGACCGGTCAGCCATTGTATA
TCCCTCCACGCTTATGTAGATTGACACAGGAAGAGGTATGTCATGTACAAGCTTTAAATT
TGTAAAGGCATCTCCAACAACATCCTTAATAAGTGGAAATTCCAATGTCGCAAAGGAGGT
AAGTAGCCTCAGATTTTGAAGCATCCACAGAATCCACTGCATACTTCATTGCAGAAAAAA
C
■■Homology search results ■■ -
sp_hit_id O35904
Definition sp|O35904|PK3CD_MOUSE Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta isoform OS=Mus musculus
Align length 108
Score (bit) 33.1
E-value 0.45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921212|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_A09.
         (361 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O35904|PK3CD_MOUSE Phosphatidylinositol-4,5-bisphosphate 3-ki...    33   0.45 
sp|Q59468|HMDH_HALVO 3-hydroxy-3-methylglutaryl-coenzyme A reduc...    32   0.76 
sp|P95895|TDXH_SULSO Probable peroxiredoxin OS=Sulfolobus solfat...    31   1.7  
sp|B0JFQ0|UVRC_MICAN UvrABC system protein C OS=Microcystis aeru...    31   2.2  
sp|Q96XS5|TDXH2_SULTO Probable peroxiredoxin 2 OS=Sulfolobus tok...    31   2.2  
sp|Q6L240|TDXH1_PICTO Probable peroxiredoxin 1 OS=Picrophilus to...    31   2.2  
sp|Q58550|Y1150_METJA UPF0215 protein MJ1150 OS=Methanocaldococc...    30   2.9  
sp|P53118|ROG1_YEAST Putative lipase ROG1 OS=Saccharomyces cerev...    30   2.9  
sp|O00329|PK3CD_HUMAN Phosphatidylinositol-4,5-bisphosphate 3-ki...    30   2.9  
sp|O14338|YB33_SCHPO Uncharacterized serine-rich protein C2F12.0...    29   8.4  
sp|O26803|GATE_METTH Glutamyl-tRNA(Gln) amidotransferase subunit...    29   8.4  

>sp|O35904|PK3CD_MOUSE Phosphatidylinositol-4,5-bisphosphate
           3-kinase catalytic subunit delta isoform OS=Mus musculus
           GN=Pik3cd PE=1 SV=1
          Length = 1043

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++G A  N K+ H +            + +   + +E 
Sbjct: 610 YLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLHSEMHVPSVALRFGLIMEA 669

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 670 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKVSSQKTTKPQTKEMM 714


>sp|Q59468|HMDH_HALVO 3-hydroxy-3-methylglutaryl-coenzyme A
           reductase OS=Halobacterium volcanii GN=hmgA PE=2 SV=1
          Length = 403

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 219 IPLPVSIYISVEGYTMADRSYLPSVLEEGEALSKLKSGC 103
           +P+ V+  +SV+G ++A   YLP    EG  L+ +  GC
Sbjct: 72  VPMGVAGPVSVDGGSVAGEKYLPLATTEGALLASVNRGC 110


>sp|P95895|TDXH_SULSO Probable peroxiredoxin OS=Sulfolobus
           solfataricus GN=SSO2121 PE=3 SV=1
          Length = 215

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -2

Query: 342 MQWILWMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVH 223
           ++WI+W+ +NL++      + FP+I D +G+    L ++H
Sbjct: 82  IEWIMWIEKNLKV-----EIPFPIIADPMGNVAKRLGMIH 116


>sp|B0JFQ0|UVRC_MICAN UvrABC system protein C OS=Microcystis
           aeruginosa (strain NIES-843) GN=uvrC PE=3 SV=1
          Length = 625

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -2

Query: 198 YISVEGYTMADRSYLPSVLEEGEALS---KLKSGCPLSVLVRQGKRKAD 61
           Y+SVEG  +     LP  L EGE L+   + K G  + + V Q + KAD
Sbjct: 316 YLSVEGVEIPSEILLPCELPEGEVLAGWLREKKGRKVELTVPQRQSKAD 364


>sp|Q96XS5|TDXH2_SULTO Probable peroxiredoxin 2 OS=Sulfolobus
           tokodaii GN=ST2442 PE=3 SV=1
          Length = 212

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = -2

Query: 342 MQWILWMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVH 223
           ++W++W+ +NL++      + FP+I D +G+    L ++H
Sbjct: 82  IEWVMWIEKNLKV-----EIPFPIIADPMGNVAKRLGMIH 116


>sp|Q6L240|TDXH1_PICTO Probable peroxiredoxin 1 OS=Picrophilus
           torridus GN=PTO0377 PE=3 SV=1
          Length = 227

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -2

Query: 342 MQWILWMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLV 226
           ++WI W+ QNL++      ++FP+I D +G   T L ++
Sbjct: 81  IEWINWIKQNLKI-----DIKFPIIADPMGHVATKLGMI 114


>sp|Q58550|Y1150_METJA UPF0215 protein MJ1150 OS=Methanocaldococcus
           jannaschii GN=MJ1150 PE=3 SV=1
          Length = 184

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/68 (25%), Positives = 34/68 (50%)
 Frame = -2

Query: 279 FPLIKDVVGDAFTNLKLVHDIPLPVSIYISVEGYTMADRSYLPSVLEEGEALSKLKSGCP 100
           F  +K    DA   +KL++  P P  +      Y  AD+ ++ +V+++ +  SK+     
Sbjct: 112 FLALKKYFDDADERIKLINSFPEPEKMENIYVQYVGADKEFVKNVIKKTKLKSKIPECLR 171

Query: 99  LSVLVRQG 76
           +S L+ +G
Sbjct: 172 ISHLIGRG 179


>sp|P53118|ROG1_YEAST Putative lipase ROG1 OS=Saccharomyces
           cerevisiae GN=ROG1 PE=1 SV=1
          Length = 685

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = -2

Query: 297 SFATLEFPLIKDVVGDAFTNLKLVHDIPLPVSIYIS--VEGYTMADRSYLPSVLEEGEAL 124
           +F TL  PL           L +V D P  + + +S  V G T  D   L + +E G+ L
Sbjct: 297 NFITLASPL-----------LGIVTDNPAYIKVLLSFGVIGKTGQDLG-LENDVEVGKPL 344

Query: 123 SKLKSGCPLSVLVRQGKRK-ADSGSLKDVITPLHIRS 16
             L SG PL  ++R+ KR+   + ++ D I PL+  S
Sbjct: 345 LYLLSGLPLIEILRRFKRRTVYANAINDGIVPLYTAS 381


>sp|O00329|PK3CD_HUMAN Phosphatidylinositol-4,5-bisphosphate
           3-kinase catalytic subunit delta isoform OS=Homo sapiens
           GN=PIK3CD PE=1 SV=2
          Length = 1044

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++  A  N K+ H +            + +   + +E 
Sbjct: 611 YLLQLVQVLKYESYLDCELTKFLLDRALANRKIGHFLFWHLRSEMHVPSVALRFGLILEA 670

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 671 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKLSSQKTPKPQTKELM 715


>sp|O14338|YB33_SCHPO Uncharacterized serine-rich protein C2F12.03c
           OS=Schizosaccharomyces pombe GN=SPBC2F12.03c PE=1 SV=1
          Length = 891

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 218 MSCTSFKFVKASPTTSLISGNSNVAKEVSSL 310
           MS +SF   ++SPT+  +SG  ++A + SS+
Sbjct: 732 MSSSSFPSAQSSPTSPFLSGTPSIANQSSSI 762
tr_hit_id A2Q1R4
Definition tr|A2Q1R4|A2Q1R4_MEDTR HEAT OS=Medicago truncatula
Align length 29
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921212|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_A09.
         (361 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2Q1R4|A2Q1R4_MEDTR HEAT OS=Medicago truncatula GN=MtrDRAFT_A...    34   3.2  
tr|B8B0N3|B8B0N3_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|A7R037|A7R037_VITVI Chromosome undetermined scaffold_296, who...    34   4.2  
tr|A5AJA7|A5AJA7_VITVI Putative uncharacterized protein OS=Vitis...    34   4.2  
tr|Q8CJ28|Q8CJ28_MOUSE Phosphatidylinositol 3-kinase catalytic d...    33   7.2  
tr|Q8CI98|Q8CI98_MOUSE Phosphatidylinositol 3-kinase catalytic d...    33   7.2  
tr|Q8BS14|Q8BS14_MOUSE Putative uncharacterized protein OS=Mus m...    33   7.2  
tr|Q546P7|Q546P7_MOUSE Phosphatidylinositol 3-kinase p110 delta ...    33   7.2  
tr|Q3UDT3|Q3UDT3_MOUSE Putative uncharacterized protein OS=Mus m...    33   7.2  
tr|Q3TBW3|Q3TBW3_MOUSE Phosphatidylinositol 3-kinase catalytic d...    33   7.2  
tr|Q3T9Y0|Q3T9Y0_MOUSE Phosphatidylinositol 3-kinase catalytic d...    33   7.2  
tr|B0QZL5|B0QZL5_MOUSE Phosphatidylinositol 3-kinase catalytic d...    33   7.2  
tr|Q4S9V1|Q4S9V1_TETNG Chromosome undetermined SCAF14694, whole ...    33   9.3  
tr|Q5VMT5|Q5VMT5_ORYSJ cDNA clone:J023074F05, full insert sequen...    33   9.3  
tr|A3BAS3|A3BAS3_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.3  
tr|A1XFD1|A1XFD1_ORYSI AF-4 domain containing protein-like prote...    33   9.3  
tr|Q97XY3|Q97XY3_SULSO Nitric oxide reductase, subunit I (Cytoch...    33   9.3  

>tr|A2Q1R4|A2Q1R4_MEDTR HEAT OS=Medicago truncatula
            GN=MtrDRAFT_AC149032g29v2 PE=4 SV=1
          Length = 1683

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 12/29 (41%), Positives = 24/29 (82%)
 Frame = -1

Query: 361  VFSAMKYAVDSVDASKSEATYLLCDIGIS 275
            +F ++K + D+VDASKS+ ++ +CD+G++
Sbjct: 1030 IFQSIKLSEDAVDASKSKNSHAICDLGLA 1058


>tr|B8B0N3|B8B0N3_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_22577 PE=4 SV=1
          Length = 1530

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = -1

Query: 361  VFSAMKYAVDSVDASKSEATYLLCDIGI 278
            +F ++KY+ D+VD +K++  + +CD+GI
Sbjct: 991  IFKSIKYSQDAVDVNKTKTLHAICDLGI 1018


>tr|A7R037|A7R037_VITVI Chromosome undetermined scaffold_296, whole
            genome shotgun sequence OS=Vitis vinifera
            GN=GSVIVT00010956001 PE=4 SV=1
          Length = 1787

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/29 (44%), Positives = 23/29 (79%)
 Frame = -1

Query: 361  VFSAMKYAVDSVDASKSEATYLLCDIGIS 275
            +F ++K + D VDA+KS+ ++ LCD+G+S
Sbjct: 1008 IFQSIKLSEDIVDAAKSKNSHALCDLGLS 1036


>tr|A5AJA7|A5AJA7_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_030148 PE=4 SV=1
          Length = 1922

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/29 (44%), Positives = 23/29 (79%)
 Frame = -1

Query: 361  VFSAMKYAVDSVDASKSEATYLLCDIGIS 275
            +F ++K + D VDA+KS+ ++ LCD+G+S
Sbjct: 1065 IFQSIKLSEDIVDAAKSKNSHALCDLGLS 1093


>tr|Q8CJ28|Q8CJ28_MOUSE Phosphatidylinositol 3-kinase catalytic
           delta polypeptide OS=Mus musculus GN=2610208K16Rik PE=2
           SV=1
          Length = 1043

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++G A  N K+ H +            + +   + +E 
Sbjct: 610 YLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRFGLIMEA 669

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 670 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKVSSQKTTKPQTKEMM 714


>tr|Q8CI98|Q8CI98_MOUSE Phosphatidylinositol 3-kinase catalytic
           delta polypeptide OS=Mus musculus GN=Pik3cd PE=2 SV=2
          Length = 1045

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++G A  N K+ H +            + +   + +E 
Sbjct: 611 YLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRFGLIMEA 670

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 671 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKVSSQKTTKPQTKEMM 715


>tr|Q8BS14|Q8BS14_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=Pik3cd PE=2 SV=1
          Length = 1047

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++G A  N K+ H +            + +   + +E 
Sbjct: 614 YLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRFGLIMEA 673

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 674 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKVSSQKTTKPQTKEMM 718


>tr|Q546P7|Q546P7_MOUSE Phosphatidylinositol 3-kinase p110 delta
           OS=Mus musculus GN=2610208K16Rik PE=2 SV=1
          Length = 1043

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++G A  N K+ H +            + +   + +E 
Sbjct: 610 YLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLHSEMHVPSVALRFGLIMEA 669

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 670 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKVSSQKTTKPQTKEMM 714


>tr|Q3UDT3|Q3UDT3_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=Pik3cd PE=2 SV=1
          Length = 1044

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++G A  N K+ H +            + +   + +E 
Sbjct: 611 YLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRFGLIMEA 670

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 671 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKVSSQKTTKPQTKEMM 715


>tr|Q3TBW3|Q3TBW3_MOUSE Phosphatidylinositol 3-kinase catalytic
           delta polypeptide OS=Mus musculus GN=Pik3cd PE=2 SV=1
          Length = 1046

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
 Frame = -2

Query: 327 WMLQNLRLLTSFATLEFPLIKDVVGDAFTNLKLVHDI-----------PLPVSIYISVEG 181
           ++LQ +++L   + L+  L K ++G A  N K+ H +            + +   + +E 
Sbjct: 613 YLLQLVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALRFGLIMEA 672

Query: 180 YTMADRSYLPSVLEEGEALSKLKSGCPLSVLVRQGKRKADSGSLKDVI 37
           Y      ++  ++++GEALSKLK+   L+  V+   +K      K+++
Sbjct: 673 YCRGSTHHMKVLMKQGEALSKLKA---LNDFVKVSSQKTTKPQTKEMM 717