BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921218|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_B04.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Z1K7|APC2_MOUSE Adenomatous polyposis coli protein 2 OS=Mus...    30   7.6  
sp|A4FVP2|OCIS_ARATH (E)-beta-ocimene synthase, chloroplastic OS...    30   9.9  

>sp|Q9Z1K7|APC2_MOUSE Adenomatous polyposis coli protein 2 OS=Mus
           musculus GN=Apc2 PE=1 SV=1
          Length = 2274

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +1

Query: 217 HLIITKGH*LRLARQSPPQSETTTKSPTIKLPQIQH 324
           HL+   GH   L +QS P++ETT+K P   LP ++H
Sbjct: 727 HLVHALGH---LEKQSLPEAETTSKKP---LPPLRH 756


>sp|A4FVP2|OCIS_ARATH (E)-beta-ocimene synthase, chloroplastic
           OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1
          Length = 565

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
 Frame = +1

Query: 124 WLGKS-PKVIFHLLPSCIIHECHLGIFGIIYLHLIITKGH*LRLARQSPPQSETTTKSPT 300
           W+  S P ++ HL   C++ +  L I G     ++ +    LRLA      SE   +  T
Sbjct: 418 WISSSVPTILLHLF--CLLSDQTLDILGSYNHSVVRSSATILRLANDLATSSEELARGDT 475

Query: 301 IKLPQIQHDEK*LQHFQYPKKIRLRTGIQWLTLVLRKE 414
           +K  Q    E      +    I+   G+ W  L + K+
Sbjct: 476 MKSVQCHMHETGASEAESRAYIQGIIGVAWDDLNMEKK 513

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921218|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_B04.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0I638|Q0I638_SYNS3 Putative uncharacterized protein OS=Synec...    34   5.7  
tr|A9VDF8|A9VDF8_MONBE Predicted protein OS=Monosiga brevicollis...    33   9.7  

>tr|Q0I638|Q0I638_SYNS3 Putative uncharacterized protein
           OS=Synechococcus sp. (strain CC9311) GN=sync_2897 PE=4
           SV=1
          Length = 228

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 425 AESPSFRSTRVSHWMPVLSLIFLGYWKCWSYFSSCWI 315
           ++ P  R    +  + V SL FLG W CW    SCWI
Sbjct: 96  SDVPLIRERLKAEGVVVKSLPFLGAWDCWWGLMSCWI 132


>tr|A9VDF8|A9VDF8_MONBE Predicted protein OS=Monosiga brevicollis
           GN=12827 PE=4 SV=1
          Length = 747

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 408 KGRTFCYPSQXXXXXXXWAILVSMHHHPPHCKQVCTAFFH 527
           KG    Y S         A L ++HHHPPHC  + T FFH
Sbjct: 64  KGHESFYRSLQHRNEDIKAELCTLHHHPPHC--LPTPFFH 101