BP921227
Clone id YMU001_000147_C01
Library
Length 601
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGATATTACCTGCAGGTACTCAGGATATAAACCACGACGGTGGTGAATAATGCCAAGTA
ATCCAACCATGTGACACTATAAGGAACGTAGTGGTATATACCCATCGTCTCAAGAAAACG
TGGCTGCCATGGAGGAGCTGGGTGAAGCATCCCACTAACTACGAAGAGTGTGAACTAAGT
CTAGATACCACTAATTGTATCCACAGAAGTGGGATCCTCTTTAACAGCATTAGCTAAAAT
GAGCTCGCACGGGTGAGACTCAAAAGCATGTATAGTATCTGGCAGCATATCCAATGTGCG
ACAAATGTCTGTCAACAAGGAAATGGGATCTTTTCCTTCCCCCCAACAAGTGAGGTGGGA
ACTTCTGGACTATAACAACTAGAAAATTAAACCCCACAAGACAAGACCTGTGCAGACACC
CACCCGACATAGGAGGTCATACACTGCACGCCTTAACATATGCGCATGTGGGCAACCCAA
CGACAGTGGTTAATAGCCTCATCTACATGTAAGGTGCAGCACGAACAAGAACGCTCATAG
CCAACATTGCCAGCCCAAGTGCCCACCAGGAAACCAGCATGAACGATCAAACACATGGCA
T
■■Homology search results ■■ -
sp_hit_id O13978
Definition sp|O13978|MUG66_SCHPO Meiotically up-regulated gene 66 protein OS=Schizosaccharomyces pombe
Align length 59
Score (bit) 32.0
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921227|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_C01.
(601 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O13978|MUG66_SCHPO Meiotically up-regulated gene 66 protein O... 32 2.5
sp|Q9NS15|LTBP3_HUMAN Latent-transforming growth factor beta-bin... 32 3.2

>sp|O13978|MUG66_SCHPO Meiotically up-regulated gene 66 protein
OS=Schizosaccharomyces pombe GN=mug66 PE=1 SV=1
Length = 184

Score = 32.0 bits (71), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 21/59 (35%)
Frame = +1

Query: 73 DTIRN---------VVVYTHRLKKTW------LPWRSWVKHPT------NYEECELSLD 186
DTIRN +++Y KK+W +PW W+ H T +Y+E LSL+
Sbjct: 69 DTIRNEAGANGQMILLLYERSPKKSWFGKGNTIPWEQWILHTTILEEGDSYQESSLSLE 127


>sp|Q9NS15|LTBP3_HUMAN Latent-transforming growth factor
beta-binding protein 3 OS=Homo sapiens GN=LTBP3 PE=1
SV=4
Length = 1303

Score = 31.6 bits (70), Expect = 3.2
Identities = 22/76 (28%), Positives = 31/76 (40%)
Frame = +2

Query: 320 EMGSFPSPQQVRWELLDYNN*KIKPHKTRPVQTPTRHRRSYTARLNICACGQPNDSG**P 499
E+ S PSP +RW L D + P ++ PT+ + RLN CG P
Sbjct: 541 ELISRPSPPTMRWFLPD-----LPPSRSAVEIAPTQVTETDECRLNQNICGHGECVPGPP 595

Query: 500 HLHVRCSTNKNAHSQH 547
C+ +H QH
Sbjct: 596 DYSCHCNPGYRSHPQH 611


tr_hit_id Q0EZE2
Definition tr|Q0EZE2|Q0EZE2_9PROT Putative uncharacterized protein OS=Mariprofundus ferrooxydans PV-1
Align length 59
Score (bit) 34.3
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921227|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_C01.
(601 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0EZE2|Q0EZE2_9PROT Putative uncharacterized protein OS=Marip... 34 5.6
tr|Q2FMG1|Q2FMG1_METHJ Putative uncharacterized protein OS=Metha... 33 9.8

>tr|Q0EZE2|Q0EZE2_9PROT Putative uncharacterized protein
OS=Mariprofundus ferrooxydans PV-1 GN=SPV1_14299 PE=4
SV=1
Length = 240

Score = 34.3 bits (77), Expect = 5.6
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Frame = +3

Query: 411 CRHPPD--------IGGHTLHALTYAHVGNPTTVVNSLIYM*GAARTRTLIANIASPSA 563
C HPP +GG +HAL YA+V P ++N+LI + A L+A+ + P+A
Sbjct: 120 CLHPPGGATALIAVVGGQDIHALGYAYVLEP-VMLNALILLCVALLFNNLVASRSYPAA 177


>tr|Q2FMG1|Q2FMG1_METHJ Putative uncharacterized protein
OS=Methanospirillum hungatei (strain JF-1 / DSM 864)
GN=Mhun_2006 PE=4 SV=1
Length = 279

Score = 33.5 bits (75), Expect = 9.8
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1

Query: 409 RSCLVGFNFLVVIVQKFPPHLLGGRKRSH--FLVDRHLSHIGYAARYYTCF*VSPVRAH 239
RS F+ L++ F LL GR+R+H FL++ H S + + +R T SP+R H
Sbjct: 98 RSRHAEFSSLIIRTDPFLSELLTGRERNHLAFLIECHDSRVDFTSRRIT----SPLRMH 152