BP921232 [AcEST]

BP921232
Clone id	YMU001_000147_C06
Library	YMU01
Length	422
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000147_C06.
Accession	BP921232
Tissue type	prothallium
Developmental stage	-
Contig ID	CL1983Contig1
Sequence	ATGCTAGCAAAGCAAGAACCACTGACATAGAATGTCAATCCGTGGGATGTAGCTGACCCA ACTAGTGCATGCAGGCTACAAGAAATAGCTAATCTCTAAAAATTCCCCAGTCCAATGTGC TCTTGCCTAGATCAGTCGCAGATGTGTGTCAAACATAAAAAGGAACTTTCCATACCCGAT GATTTTGTATAGCGATGATGCTCTAAATGCAGTGAAACTTACTACCTAGAATGTGCAAAG TATCCTCAACATCCCTATATACTTAAAAGCCATTTATCATACTCAAAAAAAGTGGTGTCT AAGATAAACAACCTATATCGGTTAGGCAGTTTCAACCTCTGAAGCACTCTGTAGATTGCT TAGGACATGCTCTATCAATCCCTATGGTTAAAAATCAGTCTAGATGCATGTATTGTGCGT AG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q86VS3
Definition	sp\|Q86VS3\|IQCH_HUMAN IQ domain-containing protein H OS=Homo sapiens
Align length	27
Score (bit)	30.8
E-value	2.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921232\|Adiantum capillus-veneris mRNA, clone: YMU001_000147_C06. (422 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q86VS3\|IQCH_HUMAN IQ domain-containing protein H OS=Homo sapi... 31 2.3 sp\|Q54WH5\|ELMOE_DICDI ELMO domain-containing protein E OS=Dictyo... 30 5.0 >sp\|Q86VS3\|IQCH_HUMAN IQ domain-containing protein H OS=Homo sapiens GN=IQCH PE=2 SV=1 Length = 1027 Score = 30.8 bits (68), Expect = 2.3 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 241 YPQHPYILKSHLSYSKKVVSKINNLYR 321 +P+H L +HL YS K + +I NL R Sbjct: 543 FPKHHMCLATHLMYSPKAIKRIKNLIR 569 >sp\|Q54WH5\|ELMOE_DICDI ELMO domain-containing protein E OS=Dictyostelium discoideum GN=elmoE PE=4 SV=1 Length = 1677 Score = 29.6 bits (65), Expect = 5.0 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +1 Query: 211 SETYYLECAKYPQHPYILKSHLSYSKKVVSKINNLYRL 324 S +YL P + ++++H ++S INN+YRL Sbjct: 393 SSNFYLHILNNPAYNEVIETHFEMVCLILSLINNMYRL 430
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B4ET99
Definition	tr\|B4ET99\|B4ET99_PROMH Putative membrane-associated phosphatase OS=Proteus mirabilis (strain HI4320)
Align length	80
Score (bit)	33.1
E-value	7.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921232\|Adiantum capillus-veneris mRNA, clone: YMU001_000147_C06. (422 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B4ET99\|B4ET99_PROMH Putative membrane-associated phosphatase ... 33 7.0 >tr\|B4ET99\|B4ET99_PROMH Putative membrane-associated phosphatase OS=Proteus mirabilis (strain HI4320) GN=PMI0832 PE=4 SV=1 Length = 240 Score = 33.1 bits (74), Expect = 7.0 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Frame = -3 Query: 252 MLRILCTFV--VSFTAFRASSLYKIIGYGKFLFMFDTHLRLIARAHWTGEFLEISYFL 79 ML I C+F + +SF +F + L +I L + A AHW + L S L Sbjct: 157 MLLIFCSFILRYLSFRSFLCALLITVI----------FSLPRVMAGAHWASDILVGSISL 206 Query: 78 *PACTSWVSYIPRIDILCQW 19 TSW+ P DI+ W Sbjct: 207 TLVTTSWLLITPASDIIIHW 226