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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921242
Clone id YMU001_000147_D05
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGAATCAAACAAGTGAACAACCTGTAGGGAGTTCACATCCACATCTTTTCTCCATAGACT
CTGATACCTCTGGAGACATTTTAGGTTTGTACAAAGCTACCCAGAGAATTTTCATATCAT
GAGTAGCAGTTCAAAATCGCACTGCAGCCTGTAGCTTCTCATATATAGTTACAAGTATGA
TCCCGTTGGTGCACTGTTTGAACAAGCAGATTTTGTGGTTCAAAATTTGCCGGAACCTAA
ACGGTAACCAGGTCTTACAAAATGGCCTCTCCACCCTCCGCAAATGCACCAAAAAGGGTG
ATATAATCTCACAAAATAGACCCTTATGGCTTGCGTGTTGCTTTTATTAGCACAAGCGCA
TTCAAAGGCCACATCAAGCATCGTCAGGAGATCCATCCATTAAGATGATCTCATGTCAAT
CTACATTTCATTTTCCCTTCAAAATTGCATGTGTGGTGGCACTTATATGCTTAAACAGCT
GGTTCCGTGAGTCAAAATCTTCACCA
■■Homology search results ■■ -
sp_hit_id P53863
Definition sp|P53863|JJJ1_YEAST J protein JJJ1 OS=Saccharomyces cerevisiae
Align length 23
Score (bit) 33.1
E-value 0.71
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921242|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_D05.
         (493 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53863|JJJ1_YEAST J protein JJJ1 OS=Saccharomyces cerevisiae ...    33   0.71 
sp|Q6QLN1|POLN_AHEV Non-structural polyprotein pORF1 OS=Avian he...    33   0.93 
sp|P09714|US01_HCMVA Uncharacterized protein HQLF3 OS=Human cyto...    32   1.6  
sp|P09707|US31_HCMVA Uncharacterized protein HHRF6 OS=Human cyto...    32   2.0  
sp|Q99KF0|CAR14_MOUSE Caspase recruitment domain-containing prot...    30   7.9  

>sp|P53863|JJJ1_YEAST J protein JJJ1 OS=Saccharomyces cerevisiae
           GN=JJJ1 PE=1 SV=1
          Length = 590

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 492 GEDFDSRNQLFKHISATTHAILK 424
           GE FDSRN+LF H+    HA +K
Sbjct: 555 GESFDSRNKLFNHVKIAGHAAVK 577


>sp|Q6QLN1|POLN_AHEV Non-structural polyprotein pORF1 OS=Avian
           hepatitis E virus (isolate Chicken/California/Meng)
           GN=ORF1 PE=3 SV=1
          Length = 1531

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 26/87 (29%), Positives = 42/87 (48%)
 Frame = -2

Query: 327 QHASHKGLFCEIISPFLVHLRRVERPFCKTWLPFRFRQILNHKICLFKQCTNGIILVTIY 148
           Q A  +GL C +I   L++  +V R FC+          L    C   QC  GI L +++
Sbjct: 119 QVAPRRGL-CNLIRRALLNGVKVAREFCQ----------LGFGACSH-QCEVGIALYSLH 166

Query: 147 EKLQAAVRF*TATHDMKILWVALYKPK 67
           +   A V    A H+M+ ++V L+ P+
Sbjct: 167 DMRPADVACAMARHNMRTMYVVLHLPE 193


>sp|P09714|US01_HCMVA Uncharacterized protein HQLF3 OS=Human
           cytomegalovirus (strain AD169) GN=US1 PE=3 SV=2
          Length = 156

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -3

Query: 299 VRLYHPFWCICGGWRGHFVRPGYRLGSGKF*TTKSACSNSAPTGSYL 159
           V   H  WC CG W+GH +R   R       T +S  S+S+ + S L
Sbjct: 71  VHAAHDVWCNCGDWQGHALRSRSR-------TAESGRSSSSSSVSVL 110


>sp|P09707|US31_HCMVA Uncharacterized protein HHRF6 OS=Human
           cytomegalovirus (strain AD169) GN=US31 PE=3 SV=3
          Length = 161

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 299 VRLYHPFWCICGGWRGHFVRPGYRLGSGKF*TTKSACSNSAPTG 168
           VR  H  WC+C  WR H +R       G++ T  S+ S+++ +G
Sbjct: 60  VRDSHDRWCLCNAWRDHALR-------GRWGTAYSSGSSASSSG 96


>sp|Q99KF0|CAR14_MOUSE Caspase recruitment domain-containing protein
           14 OS=Mus musculus GN=Card14 PE=2 SV=2
          Length = 999

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -2

Query: 300 CEIISPF-LVHLRRVERPFCKTWLPFRFRQILNHKICL---FKQCT 175
           C  ++P+ LVH  R  RP    ++P    +IL  K+CL   FKQC+
Sbjct: 806 CFTLAPYTLVHPHRPARPRPVLFVPRLVGRILGKKLCLLQGFKQCS 851
tr_hit_id A9SF91
Definition tr|A9SF91|A9SF91_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 25
Score (bit) 45.8
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921242|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_D05.
         (493 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SF91|A9SF91_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|Q8IBP1|Q8IBP1_PLAF7 Putative uncharacterized protein PF07_008...    35   1.5  
tr|B6KUY3|B6KUY3_TOXGO DnaJ / zinc finger (C2H2 type) domain-con...    35   1.9  
tr|Q2QQ93|Q2QQ93_ORYSJ Os12g0502700 protein OS=Oryza sativa subs...    34   3.3  
tr|Q8QRS9|Q8QRS9_9BETA US31 OS=Panine herpesvirus 2 PE=4 SV=1          34   4.2  
tr|B5WY38|B5WY38_9VIRU Non-structural polyprotein (Fragment) OS=...    33   5.6  
tr|B5WY34|B5WY34_9VIRU Non-structural polyprotein OS=Avian hepat...    33   7.3  
tr|B3LP69|B3LP69_YEAS1 Putative uncharacterized protein OS=Sacch...    33   7.3  
tr|A6ZRL4|A6ZRL4_YEAS7 J-protein (Type III) OS=Saccharomyces cer...    33   7.3  
tr|A3LQT9|A3LQT9_PICST Predicted protein OS=Pichia stipitis GN=P...    33   7.3  
tr|A8DMP6|A8DMP6_9VIRU ORF2 OS=Anellovirus PRA1 PE=4 SV=1              33   9.3  
tr|B4HXA6|B4HXA6_DROSE GM15071 OS=Drosophila sechellia GN=GM1507...    33   9.3  

>tr|A9SF91|A9SF91_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_233176 PE=4 SV=1
          Length = 809

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -2

Query: 492 GEDFDSRNQLFKHISATTHAILKGK 418
           GEDF+SR+QLFKHI+AT HAILK K
Sbjct: 785 GEDFESRSQLFKHIAATNHAILKSK 809


>tr|Q8IBP1|Q8IBP1_PLAF7 Putative uncharacterized protein PF07_0086
            OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0086 PE=4
            SV=1
          Length = 3429

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -2

Query: 225  RFRQILNHKICLFKQCTNGIILVTIYEKLQAAVRF*TATHDMKILWVALYKPKMS 61
            +++ ILNH I  FK C N II+  IY+K +  V       D     + LY+ KM+
Sbjct: 922  KYKYILNHSIYFFKSCDNNIII--IYDKYKLYVYQIMLKGDSNFCILLLYEKKMN 974


>tr|B6KUY3|B6KUY3_TOXGO DnaJ / zinc finger (C2H2 type)
           domain-containing protein OS=Toxoplasma gondii ME49
           GN=TGME49_101340 PE=4 SV=1
          Length = 692

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = -2

Query: 492 GEDFDSRNQLFKHISATTHAILK 424
           GE FDSRN++F+HI A  HA LK
Sbjct: 654 GEAFDSRNKMFQHIKAEGHAALK 676


>tr|Q2QQ93|Q2QQ93_ORYSJ Os12g0502700 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0502700 PE=4 SV=2
          Length = 607

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -2

Query: 492 GEDFDSRNQLFKHISATTHAILK 424
           G  FDSRN+LF H+  T HA+LK
Sbjct: 579 GSTFDSRNKLFSHLEETGHAMLK 601


>tr|Q8QRS9|Q8QRS9_9BETA US31 OS=Panine herpesvirus 2 PE=4 SV=1
          Length = 153

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 299 VRLYHPFWCICGGWRGHFVRPGYRLGSGKF*TTKSACSNSAPTG 168
           VR  H  WC+C GWR H +R       G++ T  S+ S+++ +G
Sbjct: 60  VRDSHDRWCLCNGWRDHALR-------GRWGTAYSSGSSASSSG 96


>tr|B5WY38|B5WY38_9VIRU Non-structural polyprotein (Fragment)
           OS=Avian hepatitis E virus PE=4 SV=2
          Length = 1531

 Score = 33.5 bits (75), Expect = 5.6
 Identities = 26/87 (29%), Positives = 42/87 (48%)
 Frame = -2

Query: 327 QHASHKGLFCEIISPFLVHLRRVERPFCKTWLPFRFRQILNHKICLFKQCTNGIILVTIY 148
           Q A  +GL C +I   L++  RV R FC+          L    C   QC  GI L +++
Sbjct: 118 QVAPRRGL-CNLIRRALLNGVRVAREFCQ----------LGFGSCSH-QCEVGIALYSLH 165

Query: 147 EKLQAAVRF*TATHDMKILWVALYKPK 67
           +   A V    A H+M+ +++ L+ P+
Sbjct: 166 DMRPAEVACAMARHNMRTMYIVLHLPE 192


>tr|B5WY34|B5WY34_9VIRU Non-structural polyprotein OS=Avian
           hepatitis E virus PE=4 SV=2
          Length = 1532

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 27/87 (31%), Positives = 42/87 (48%)
 Frame = -2

Query: 327 QHASHKGLFCEIISPFLVHLRRVERPFCKTWLPFRFRQILNHKICLFKQCTNGIILVTIY 148
           Q A  +GL C +I   L++  +V R FC+          L    C   QC  GI L +++
Sbjct: 119 QVAPRRGL-CNLIRRALLNGVKVTREFCQ----------LGFGSCSH-QCEVGIALYSLH 166

Query: 147 EKLQAAVRF*TATHDMKILWVALYKPK 67
           +   A V    A H+M+ L+V L+ P+
Sbjct: 167 DMRPADVACAMARHNMRTLYVVLHLPE 193


>tr|B3LP69|B3LP69_YEAS1 Putative uncharacterized protein
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_03352 PE=4 SV=1
          Length = 590

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 492 GEDFDSRNQLFKHISATTHAILK 424
           GE FDSRN+LF H+    HA +K
Sbjct: 555 GESFDSRNKLFNHVKIAGHAAVK 577


>tr|A6ZRL4|A6ZRL4_YEAS7 J-protein (Type III) OS=Saccharomyces
           cerevisiae (strain YJM789) GN=JJJ1 PE=4 SV=1
          Length = 590

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 492 GEDFDSRNQLFKHISATTHAILK 424
           GE FDSRN+LF H+    HA +K
Sbjct: 555 GESFDSRNKLFNHVKIAGHAAVK 577


>tr|A3LQT9|A3LQT9_PICST Predicted protein OS=Pichia stipitis
           GN=PICST_67190 PE=4 SV=2
          Length = 574

 Score = 33.1 bits (74), Expect = 7.3
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -2

Query: 489 EDFDSRNQLFKHISATTHAILKGK 418
           E F SRN+LF+H+++T HA LK K
Sbjct: 543 ETFTSRNKLFQHVNSTGHAALKMK 566