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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921250
Clone id YMU001_000147_E01
Library
Length 505
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGGCCGATATGATTCACCCCCTTCATCTGTTATTTGTCTCTGTGCTGCTGGTTCCATAGA
AAGAGGACCACCCATTTTCGAAAAATAATTGCCTTCCCCATGTGAACTTGTGTCTGTTAC
TTGTGCATTCAATATCATATTAGAATGACTGTATTTCAGTGAATTAAAGGCCGTGGCAGG
TATATCCGTGTTGTCATTTCTGCAATTGTCAGAAACTTTTTCACAAAACCTGGCAATACT
ATTCCTTTGCTCCTCCACGCTTATAACATCAGAATCAATAACAAAATCTGATGTTGGGAC
ACTTTGACTTTTCACTGCCTCAAGAGCATCTCCGCTGCCTTCTGCAGCAATGCAATGCCT
GCTTGGTTCAGAATGCAACAGAGAACAACCAGATGCTTCGTTGCAGCCATTCTGCTTCTC
CACACAATCACTATCTTGTCTTCTCTTCTCCTCATGCCTTTCAAAATTTTCTGCGGGTAA
TGTAATGTTCTGCCTGCTCGACTCT
■■Homology search results ■■ -
sp_hit_id P36112
Definition sp|P36112|YKZ6_YEAST Uncharacterized protein YKR016W OS=Saccharomyces cerevisiae
Align length 43
Score (bit) 32.3
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921250|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_E01.
         (505 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36112|YKZ6_YEAST Uncharacterized protein YKR016W OS=Saccharo...    32   1.3  
sp|Q3YSC4|PNP_EHRCJ Polyribonucleotide nucleotidyltransferase OS...    32   1.3  
sp|Q8BQJ6|TRM2_MOUSE tRNA (uracil-5-)-methyltransferase homolog ...    31   2.9  
sp|Q7QG73|AP2A_ANOGA AP-2 complex subunit alpha OS=Anopheles gam...    31   3.8  
sp|A6MMB3|RPOC1_CHLSC DNA-directed RNA polymerase subunit beta' ...    30   4.9  
sp|P38737|ECM29_YEAST Proteasome component ECM29 OS=Saccharomyce...    30   4.9  
sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo sa...    30   6.5  
sp|Q6FS63|MAD1_CANGA Spindle assembly checkpoint component MAD1 ...    30   6.5  
sp|Q07848|VE1_HPV65 Replication protein E1 OS=Human papillomavir...    30   8.4  
sp|Q969T3|SNX21_HUMAN Sorting nexin-21 OS=Homo sapiens GN=SNX21 ...    30   8.4  

>sp|P36112|YKZ6_YEAST Uncharacterized protein YKR016W
           OS=Saccharomyces cerevisiae GN=YKR016W PE=1 SV=1
          Length = 540

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -2

Query: 207 NCRND-NTDIPATAFNSLKYSHSNMILN-AQVTDTSSHGEGNY 85
           N  ND N  IP + FNS+K S+ NM+ N +Q+ +T      NY
Sbjct: 158 NSLNDSNLSIPESEFNSIKKSNQNMLTNLSQLNETLKEALSNY 200


>sp|Q3YSC4|PNP_EHRCJ Polyribonucleotide nucleotidyltransferase
           OS=Ehrlichia canis (strain Jake) GN=pnp PE=3 SV=1
          Length = 796

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = -2

Query: 303 SVPTSDFVIDSDVISVEEQRNSI-ARFCEKVS-DNCRNDNTDIPATAFNSLKYSHSNMIL 130
           S+  S+ V    V+ +EE R+ + + F EK S DN   DN D+     ++LK S    ++
Sbjct: 255 SLAYSNTVKKERVLKLEELRDKVLSDFAEKCSVDNVECDNQDV----ISALK-SFERSLV 309

Query: 129 NAQVTDTSSHGEGNYFSKM 73
            +Q+ +TSS  +G  F ++
Sbjct: 310 RSQIVETSSRIDGRAFDEI 328


>sp|Q8BQJ6|TRM2_MOUSE tRNA (uracil-5-)-methyltransferase homolog
           OS=Mus musculus GN=Trmt2b PE=2 SV=1
          Length = 493

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 381 ENNQMLRCSHSASPHNHYLVFSSPHAFQNFL 473
           + + M RCSH  SP+   L+F  PH F++ L
Sbjct: 271 QESTMTRCSHQQSPYQ--LLFGEPHIFEDLL 299


>sp|Q7QG73|AP2A_ANOGA AP-2 complex subunit alpha OS=Anopheles
           gambiae GN=alpha-Adaptin PE=3 SV=4
          Length = 934

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
 Frame = -2

Query: 345 AEGSGDALEAVKSQSVPTSDFV--IDSDVISVEEQRNSIARFCEKVSDNCRNDNTDIPAT 172
           AE    A E ++   V ++D +  +  ++ S  E+ +SI    +K       +N +I  T
Sbjct: 574 AELQQRASEYLQLSIVASTDVLATVLEEMPSFPERESSILAVLKKKKPGRVPENAEIRET 633

Query: 171 AFNSLKYSHSNMILNAQVTDTSSHGEGNYFSKMGGPLSMEPAAQ 40
             + +  SH+N   NAQ   TSS    N  S + G LS  PA+Q
Sbjct: 634 K-SPVPNSHNNAHSNAQTNHTSSANNANASSDLLG-LSTPPASQ 675


>sp|A6MMB3|RPOC1_CHLSC DNA-directed RNA polymerase subunit beta'
           OS=Chloranthus spicatus GN=rpoC1 PE=3 SV=1
          Length = 688

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -2

Query: 303 SVPTSDFVIDSDVISVEEQRNSIARFCEKVSDNCRNDNTDIPATAFNSLKYS 148
           SVPT D +I   V+++  +R   A        NCRNDN        N+ KY+
Sbjct: 533 SVPTQDMLIGLYVLTIGNRRGICANRYNPC--NCRNDNDQNETVDDNNYKYT 582


>sp|P38737|ECM29_YEAST Proteasome component ECM29 OS=Saccharomyces
           cerevisiae GN=ECM29 PE=1 SV=1
          Length = 1868

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -1

Query: 187 GYTCHGL*FTEIQSF*YDIECTSNRHKFTWGRQLFFENGWSSFYGTSSTETNNR 26
           GYTC GL  T++  F YD   T N+ +    ++  F+        T + E + R
Sbjct: 204 GYTCPGLSLTDVAFFTYDAGVTFNKEQLNKFKKAIFQFVCRGMAATQTIEQSPR 257


>sp|Q5JSH3|WDR44_HUMAN WD repeat-containing protein 44 OS=Homo
           sapiens GN=WDR44 PE=1 SV=1
          Length = 913

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 363 SRHCIAAEGSGDALEAVKSQSVPTSDFVIDSDVISVEEQRN 241
           ++  +  +G GD LE V S S+ T DF    +V   +  R+
Sbjct: 177 NKEAVEVKGGGDVLEPVSSDSLSTKDFAAVEEVAPAKPPRH 217


>sp|Q6FS63|MAD1_CANGA Spindle assembly checkpoint component MAD1
           OS=Candida glabrata GN=MAD1 PE=3 SV=1
          Length = 657

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -2

Query: 258 VEEQRNSIARFCEKVSDNCRNDNTD-IPATAFNSLKYSH 145
           + E+  ++    E +++N RN++ D IP T++NSLKY +
Sbjct: 508 LREENQNLLTMIENITEN-RNESFDKIPLTSYNSLKYQY 545


>sp|Q07848|VE1_HPV65 Replication protein E1 OS=Human papillomavirus
           type 65 GN=E1 PE=3 SV=1
          Length = 598

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -2

Query: 330 DALEAVKSQSVPTSDFVIDSDVISVEEQRNSIARFCEKVSDNCRN 196
           D LE +  +S      +ID DV+   +Q NS+A +  K++D+C N
Sbjct: 29  DTLEDLCDESDSNVSNLIDDDVV---DQGNSLALYNAKITDDCDN 70


>sp|Q969T3|SNX21_HUMAN Sorting nexin-21 OS=Homo sapiens GN=SNX21
           PE=2 SV=1
          Length = 373

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = -2

Query: 396 ASGCSLLHSEPSRHCIAAEGSGDALEAVKSQSVPTSDFVIDSDVISVEEQRNSIARFCEK 217
           A    LLH    RH +A +G G+A  + +++  P S  + D D   +  + +    F   
Sbjct: 9   AMASRLLHR--LRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSA 66

Query: 216 VSDNCRNDNTD 184
             D    D  D
Sbjct: 67  EDDEDDEDEDD 77
tr_hit_id B6KRY2
Definition tr|B6KRY2|B6KRY2_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 117
Score (bit) 37.0
E-value 0.54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921250|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_E01.
         (505 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KRY2|B6KRY2_TOXGO Putative uncharacterized protein OS=Toxop...    37   0.54 
tr|Q73FZ7|Q73FZ7_WOLPM Putative uncharacterized protein OS=Wolba...    36   1.2  
tr|Q7RGP2|Q7RGP2_PLAYO Putative uncharacterized protein PY04304 ...    36   1.2  
tr|B6AH45|B6AH45_9CRYT Putative uncharacterized protein OS=Crypt...    35   2.1  
tr|Q4EBK5|Q4EBK5_9RICK Putative uncharacterized protein OS=Wolba...    34   3.5  
tr|Q4E7H1|Q4E7H1_9RICK Putative uncharacterized protein (Fragmen...    34   3.5  
tr|Q9SX87|Q9SX87_ARATH F16N3.16 OS=Arabidopsis thaliana GN=F16N3...    34   3.5  
tr|B6VBW0|B6VBW0_9PELO Putative uncharacterized protein OS=Caeno...    34   3.5  
tr|A7SPJ9|A7SPJ9_NEMVE Predicted protein OS=Nematostella vectens...    34   3.5  
tr|B4RXF5|B4RXF5_ALTMD Putative excinuclease ABC subunit A OS=Al...    34   4.6  
tr|Q8MPW8|Q8MPW8_CAEEL Gex interacting protein protein 16, isofo...    34   4.6  
tr|Q8MPW7|Q8MPW7_CAEEL Gex interacting protein protein 16, isofo...    34   4.6  
tr|Q8MPW6|Q8MPW6_CAEEL Gex interacting protein protein 16, isofo...    34   4.6  
tr|Q8MPW4|Q8MPW4_CAEEL Gex interacting protein protein 16, isofo...    34   4.6  
tr|Q86DC7|Q86DC7_CAEEL Gex interacting protein protein 16, isofo...    34   4.6  
tr|B4LYQ9|B4LYQ9_DROVI GJ23898 OS=Drosophila virilis GN=GJ23898 ...    34   4.6  
tr|Q0IHU8|Q0IHU8_XENTR Densin-180 OS=Xenopus tropicalis GN=lrrc7...    33   6.0  
tr|Q54DS3|Q54DS3_DICDI Putative uncharacterized protein OS=Dicty...    33   6.0  
tr|B4LCS3|B4LCS3_DROVI GJ11255 OS=Drosophila virilis GN=GJ11255 ...    33   6.0  
tr|A2FNE3|A2FNE3_TRIVA Putative uncharacterized protein OS=Trich...    33   6.0  
tr|Q94I52|Q94I52_ORYSJ Os03g0565300 protein OS=Oryza sativa subs...    33   7.8  
tr|B8AKV1|B8AKV1_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.8  
tr|A3AJM2|A3AJM2_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.8  
tr|Q4P9Q6|Q4P9Q6_USTMA Putative uncharacterized protein OS=Ustil...    33   7.8  

>tr|B6KRY2|B6KRY2_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii ME49 GN=TGME49_018070 PE=4 SV=1
          Length = 1745

 Score = 37.0 bits (84), Expect = 0.54
 Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
 Frame = -2

Query: 504  ESSR-QNITLPAENFERHEEKRRQDSDCVEKQNGCNEASGCSLLHSEPSRHC------IA 346
            ES R +  T  A   ER ++K  +D++   ++NG    S C    SEPS H        A
Sbjct: 1276 ESQRAEEETFQAVREEREKQKAAKDAELDSRENGETMNSWCR--ESEPSAHGEARGTHAA 1333

Query: 345  AEGSGDALEAVKSQSVPTSDFVIDSDVISVEEQRNSIARFCE----KVSDNCRNDNT 187
             EG+    E   S S+P +   +D  +I  E  R S     E      +D C++ N+
Sbjct: 1334 VEGADAGGERRSSLSMPDASVGLDKALIEQERGRTSAENDAEAQEKTAADACQDGNS 1390


>tr|Q73FZ7|Q73FZ7_WOLPM Putative uncharacterized protein OS=Wolbachia
            pipientis wMel GN=WD_1174 PE=4 SV=1
          Length = 960

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
 Frame = -2

Query: 312  KSQSVPTSDFVIDSDVISVEEQRNSIARF-----CEKVSDNCRNDNTDIPATAFNS-LKY 151
            K++ V T D  I  D I +E   +  A       C+    +       +P     + LK 
Sbjct: 707  KNKDVYTDDLSIKFDRIKIEAWGSGEAGHIQGSGCDNQKCHSTESRVGMPGDYIKAKLKI 766

Query: 150  SHSNMILNAQVTDTSSHGEGNYFSKMGGPL------SMEPAAQRQITDEGGESYR 4
              +  I+  QVT+   + E N+  K GGP+      S +   Q+ IT  GG  YR
Sbjct: 767  DPNYPIIKVQVTEGGGNQESNFSDKDGGPVFIEMCNSQKQHCQQLITVAGGGEYR 821


>tr|Q7RGP2|Q7RGP2_PLAYO Putative uncharacterized protein PY04304
            OS=Plasmodium yoelii yoelii GN=PY04304 PE=4 SV=1
          Length = 1850

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 24/105 (22%), Positives = 43/105 (40%)
 Frame = -2

Query: 468  NFERHEEKRRQDSDCVEKQNGCNEASGCSLLHSEPSRHCIAAEGSGDALEAVKSQSVPTS 289
            N++ +      D++ ++  N  NE S   L+ +   +H I +  S   L   K       
Sbjct: 1557 NYDYNNSNNNDDNNFIDNSNIANEYSKQGLIQTNKYKHNIKSMSSMQRLGLSKE------ 1610

Query: 288  DFVIDSDVISVEEQRNSIARFCEKVSDNCRNDNTDIPATAFNSLK 154
                     ++E  +N I   C+K     +NDN+ I  +A+N  K
Sbjct: 1611 ---------NLEISKNGIENTCKKKDIGKKNDNSGIIVSAYNEYK 1646


>tr|B6AH45|B6AH45_9CRYT Putative uncharacterized protein
           OS=Cryptosporidium muris RN66 GN=CMU_037100 PE=4 SV=1
          Length = 488

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
 Frame = -2

Query: 363 SRHCIAAEGSGDALEAVKSQSVPTSDFVIDSDVISVEEQRNSIARFCE---------KVS 211
           S+ C+    +   L+  ++ ++ T D ++ S  I+++   N  +   E           S
Sbjct: 248 SKSCLHLATTNQQLKLKENNTIETQDILLVSQDITIKPTNNGNSLLVEDKLPINKNLSKS 307

Query: 210 DNCRNDNTDIPATAFNSLKYSHSNMILNAQVTDTSSHGEGNYFSKMGGPLS 58
            N  N   ++  +  NS   S S  + N+ +++T SH   NY  K+   +S
Sbjct: 308 QNNSNLTLNLTQSTENSKNSSLSKHLNNSTISNTDSHNSINYIVKISNKVS 358


>tr|Q4EBK5|Q4EBK5_9RICK Putative uncharacterized protein OS=Wolbachia
            endosymbiont of Drosophila ananassae GN=WwAna1729 PE=4
            SV=1
          Length = 956

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 12/115 (10%)
 Frame = -2

Query: 312  KSQSVPTSDFVIDSDVISVEEQRNSIARF-----CEKVSDNCRNDNTDIPATAFNS-LKY 151
            K++ V T D  I  D I +E   +  A       C+    +       +P     + LK 
Sbjct: 703  KNKDVYTDDLSIKFDRIKIEAWGSGEAGHIQGSGCDNQKCHSTESRVGMPGDYIKAKLKI 762

Query: 150  SHSNMILNAQVTDTSSHGEGNYFSKMGGPL------SMEPAAQRQITDEGGESYR 4
              +  I+  QVT+   + E N   K GGP+      S +   Q+ IT  GG  YR
Sbjct: 763  DPNYPIIKVQVTEGGGNQESNLSDKDGGPVFIEMCNSQKQHCQQLITVAGGGEYR 817


>tr|Q4E7H1|Q4E7H1_9RICK Putative uncharacterized protein (Fragment)
           OS=Wolbachia endosymbiont of Drosophila simulans
           GN=WwSim0542 PE=4 SV=1
          Length = 593

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 12/115 (10%)
 Frame = -2

Query: 312 KSQSVPTSDFVIDSDVISVEEQRNSIARF-----CEKVSDNCRNDNTDIPATAFNS-LKY 151
           K++ V T D  I  D I +E   +  A       C+    +       +P     + LK 
Sbjct: 340 KNKDVYTDDLSIKFDRIKIEAWGSGEAGHIQGSGCDNQKCHSTESRVGMPGDYIKAKLKI 399

Query: 150 SHSNMILNAQVTDTSSHGEGNYFSKMGGPL------SMEPAAQRQITDEGGESYR 4
             +  I+  QVT+   + E N   K GGP+      S +   Q+ IT  GG  YR
Sbjct: 400 DPNYPIIKVQVTEGGGNQESNLSDKDGGPVFIEMCNSQKQHCQQLITVAGGGEYR 454


>tr|Q9SX87|Q9SX87_ARATH F16N3.16 OS=Arabidopsis thaliana GN=F16N3.16
           PE=4 SV=1
          Length = 649

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
 Frame = -2

Query: 498 SRQNITLPAENFERHEEKRRQDSDCV-EKQNGCNEASGCS--LLHSEPSRHCIAAEGSGD 328
           S Q  T   ENF + EE    D DCV E+ + C         L++ E S  C   EG   
Sbjct: 304 SIQGTTAGMENFMQQEELNC-DRDCVFERDHWCAPYVNLETKLVNQEKSELCTGNEGEVK 362

Query: 327 ALEAVKSQSVPTSDFVIDSDVISVEEQRNSIARFCEKVSDNCRNDN 190
               V  Q V ++   +D D  +  + R+      + +   C +DN
Sbjct: 363 GCLEVSRQKVSSTFADLDKDDATTSQLRSPFGFVVDDLPSGCGSDN 408


>tr|B6VBW0|B6VBW0_9PELO Putative uncharacterized protein
           OS=Caenorhabditis sp. PS1010 GN=Csp3_JD04.002 PE=4 SV=1
          Length = 477

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 25/94 (26%), Positives = 38/94 (40%)
 Frame = -2

Query: 471 ENFERHEEKRRQDSDCVEKQNGCNEASGCSLLHSEPSRHCIAAEGSGDALEAVKSQSVPT 292
           E  +R EE RR +   VE++    E       H   SRH    EG        +  S+P 
Sbjct: 123 ETVQRFEETRRTEE--VERRVQRREKKERRSRHHSSSRHHSGWEGQTGGYIEHRGGSLPR 180

Query: 291 SDFVIDSDVISVEEQRNSIARFCEKVSDNCRNDN 190
              V ++D    E + + + R   K +D  R D+
Sbjct: 181 RTVVREADRAMTEREMDQVVRDAYKAADEARRDS 214


>tr|A7SPJ9|A7SPJ9_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g246586 PE=4 SV=1
          Length = 811

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
 Frame = -2

Query: 465 FERHEEKRRQDSDCVEKQNGCNEASGCSLLHSEPSRHCIAAEGSGDALEAVKSQSVPTSD 286
           FER+    + D DC+++   C E    + +H E  +     +   D +  + S S   ++
Sbjct: 85  FERYMSSAKPDVDCMDESLECTE----NEMHMEDKQ-----DHKSDFMSFISSSS-RQAE 134

Query: 285 FVIDSDVISVEEQRNSIARFCEKVSD--NCRNDNTDIPATAFNSLKYSHSNMILNAQVTD 112
           F + S   +++   +      E  S     +  + DIP T +  L Y +S  +   + T 
Sbjct: 135 FFLSSQASAIQSNESQALPPQELQSKIFQLQRASNDIPETHY--LSYLNSLRVGEYKQTV 192

Query: 111 TSSHGEGNYF-SKMGGPLSMEPAAQ-RQITDEGGESYR 4
            S H    YF  + G   S +PA +  ++ +E G+S+R
Sbjct: 193 DSLH---QYFDQQQGNKASSKPAIEGAEVMEEKGQSFR 227


>tr|B4RXF5|B4RXF5_ALTMD Putative excinuclease ABC subunit A
           OS=Alteromonas macleodii (strain DSM 17117 / Deep
           ecotype) GN=MADE_03329 PE=4 SV=1
          Length = 834

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
 Frame = -2

Query: 336 SGDALEAVKSQSVPTSDFVI-DSDVISVEEQRNSIARFCEKVS-DNCRNDNTDIP---AT 172
           SG   E  K ++ PT++FV  D  ++S E+  +S+    + VS +N  N + DIP    T
Sbjct: 452 SGPVDELAKVETSPTAEFVFNDKPLVSREKCNSSLTLSLKNVSRNNVNNIDIDIPLGVMT 511

Query: 171 AFNSLKYSHSNMILNAQVTDTSSHGEGNYFSKMGGPLSMEP--AAQRQITDEG 19
               +  S  + +++  + +    G G+   K  G ++     +++ ++T EG
Sbjct: 512 TVTGVSGSGKSSLISQALVELVKEGLGSVKDKTDGEVNEVALLSSEDKVTQEG 564