BP921254
Clone id YMU001_000147_E07
Library
Length 349
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGTCAACTAGGAGAGGGGGGTTTCCTTTCAGGTAAAAGCTTGGGCTTCCATTTCTGCGC
CGCCGTGTGCTCTTGCTTATCCCATAACCATCATCCTCCCGGACACATTCTATATTCTCA
TCTTGGACCCTGATTACCCTTGGCGCAGGCTATCGAAGGACTTAATTAATGGTCTCGCTT
CTTGGAAAACTGGTGGGCCCTCTGAAGGGCGAAGATGAGCTCCCTGCTGACTATGCTGGT
GGCTTGCCAGCACAAGATGCAAGTAAAGAGTCAGCTGATATCATCGATGAATACGACAAA
GGCGGCGGCGGCGGCGGCGACGACGACAGTGGCTACAAGACCATTGTTG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921254|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_E07.
(349 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q97N16
Definition tr|Q97N16|Q97N16_CLOAB Aspartate-semialdehyde dehydrogenase OS=Clostridium acetobutylicum
Align length 48
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921254|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_E07.
(349 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q97N16|Q97N16_CLOAB Aspartate-semialdehyde dehydrogenase OS=C... 34 4.1
tr|A8LSC9|A8LSC9_DINSH D-isomer specific 2-hydroxyacid dehydroge... 33 7.0
tr|Q5KFN9|Q5KFN9_CRYNE Mating-type switching protein swi10, puta... 33 7.0

>tr|Q97N16|Q97N16_CLOAB Aspartate-semialdehyde dehydrogenase
OS=Clostridium acetobutylicum GN=asd PE=4 SV=1
Length = 360

Score = 33.9 bits (76), Expect = 4.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3

Query: 33 VKAWASISAPPCALAYPITIILPDTFYILILDPDYPWRRLSKDLINGL 176
+ AW + AP CAL P P F +PD P +L +D NG+
Sbjct: 268 IDAWENFKAPECALNLPSA---PKKFLHYFDEPDRPQTKLDRDFENGM 312


>tr|A8LSC9|A8LSC9_DINSH D-isomer specific 2-hydroxyacid
dehydrogenase NAD-binding OS=Dinoroseobacter shibae
(strain DFL 12) GN=Dshi_1001 PE=3 SV=1
Length = 316

Score = 33.1 bits (74), Expect = 7.0
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2

Query: 8 LGEGGFLSGKSLGFHFCAAVCSCLSHNHHPPGHILYS---HLGP*LPL 142
LGEGG ++G+ LG + C AV ++ P + HLGP PL
Sbjct: 135 LGEGGEIAGRKLGLYGCGAVAQAVARLAKPLSMTILGHDPHLGPGHPL 182


>tr|Q5KFN9|Q5KFN9_CRYNE Mating-type switching protein swi10,
putative OS=Cryptococcus neoformans GN=CNF01110 PE=4
SV=1
Length = 390

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1

Query: 232 SQQGAHLRPSEGPPVFQEARPLIKSFDS-LRQG*SGSKMRI*NVSG 98
S G + PS GPPVFQ A ++KS + G S S M + N SG
Sbjct: 9 SSNGGSIGPSMGPPVFQTASSVLKSVAAQASPGASTSTMSLRNASG 54