BP921266
Clone id YMU001_000147_F09
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTCATGACACGTTGAGCGGGTTGACCTCCTTTAGAACTTTCATCCCAAATAGCTTGGCAA
GTATCATTAACCCATCGATCAAAGATTCGGGGGTTTATCCACTTTGGTTTTGCTAGAAAA
CTCTGGAGTTCCCTTCCTTTGTCGTCTGCTCGAAGCTAAATCCCTAGGGGTTGACCGTGG
GGCACTTAGAAGCCGCCCAAACGACATTGGGGTCACTTGAAATGCAACAAAGGTTTGTAT
GTTCCCTTGGCTTGTTTTTAACCCATCTGATCTCTGTCCGAGAGTAAAAGCTTCTGCTTC
CCTTAATACCTACCATACAACTAGTATCTGCTATACGATATTGGACATAGGGTTTGCAAA
AGATCCCGGAGCCTTTAGGAAATCCCCAAAAGCTCTGGCGGAGATCGTTATTTTCCCGTG
CTTCAGCCATTTCAGCCCCTAGACTCTTAACCGTATGTATGAATATGATGGCTACGCCAC
ATCTTGAGGATGATAGG
■■Homology search results ■■ -
sp_hit_id Q5LUR8
Definition sp|Q5LUR8|ZNUC_SILPO Zinc import ATP-binding protein znuC OS=Silicibacter pomeroyi
Align length 60
Score (bit) 34.3
E-value 0.33
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921266|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F09.
(497 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5LUR8|ZNUC_SILPO Zinc import ATP-binding protein znuC OS=Sil... 34 0.33
sp|O73954|TOP1_PYRFU DNA topoisomerase 1 OS=Pyrococcus furiosus ... 31 3.6
sp|Q4WPG0|GPI10_ASPFU GPI mannosyltransferase 3 OS=Aspergillus f... 30 4.7

>sp|Q5LUR8|ZNUC_SILPO Zinc import ATP-binding protein znuC
OS=Silicibacter pomeroyi GN=znuC PE=3 SV=1
Length = 256

Score = 34.3 bits (77), Expect = 0.33
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3

Query: 273 RSDGLKTSQGNIQTFVAFQVT-PMSFGRLLSAPRSTPRDLASSRRQRKGTPEFSSKTKVD 97
R+ GL+ G + +A T P++ R LS PR P+D+A+ R G P+ +++ D
Sbjct: 64 RAPGLRI--GYVPQKLAIDATLPITVSRFLSLPRRVPQDVAAEALARAGVPDLANRQMTD 121


>sp|O73954|TOP1_PYRFU DNA topoisomerase 1 OS=Pyrococcus furiosus
GN=topA PE=3 SV=2
Length = 1060

Score = 30.8 bits (68), Expect = 3.6
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = -1

Query: 143 DKGRELQSFLAKPKWINPRIFDR-----WVNDTCQAIWDES 36
D+ RE+QSF+ +P W+ IF++ N IWDE+
Sbjct: 210 DREREIQSFVPQPYWVIKLIFEKNGKKYTANYEKDKIWDEN 250


>sp|Q4WPG0|GPI10_ASPFU GPI mannosyltransferase 3 OS=Aspergillus
fumigatus GN=gpi10 PE=3 SV=1
Length = 771

Score = 30.4 bits (67), Expect = 4.7
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3

Query: 177 VGHLEAAQTTLGSLEMQQRFVCSLGLFLTHLISVRE*KLLLPLIPTIQLVSA 332
+GHL++ ++ Q +C + F+ L+S +E + + PL+P++ ++SA
Sbjct: 373 LGHLQSL------VQAQLALICVIMPFVLSLVSHKEVRFIYPLLPSLHILSA 418


tr_hit_id Q1YN71
Definition tr|Q1YN71|Q1YN71_MOBAS NADH-quinone oxidoreductase OS=Manganese-oxidizing bacterium (strain SI85-9A1)
Align length 42
Score (bit) 32.7
E-value 9.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921266|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F09.
(497 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1YN71|Q1YN71_MOBAS NADH-quinone oxidoreductase OS=Manganese-... 33 9.8
tr|B6VY22|B6VY22_9BACE Putative uncharacterized protein OS=Bacte... 33 9.8

>tr|Q1YN71|Q1YN71_MOBAS NADH-quinone oxidoreductase
OS=Manganese-oxidizing bacterium (strain SI85-9A1)
GN=SI859A1_01971 PE=3 SV=1
Length = 691

Score = 32.7 bits (73), Expect = 9.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1

Query: 167 LGI*LRADDKGRELQSFLAKPKWINPRIFDRWVNDTCQAIWD 42
+G +R D +GRE+ L + IN I + W++D + IWD
Sbjct: 236 VGSNIRVDTRGREVMRILPR---INEEINEEWISDKTRFIWD 274


>tr|B6VY22|B6VY22_9BACE Putative uncharacterized protein
OS=Bacteroides dorei DSM 17855 GN=BACDOR_02183 PE=4 SV=1
Length = 367

Score = 32.7 bits (73), Expect = 9.8
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2

Query: 436 AEMAEARENNDLRQSFWGFPKGS-GIFCKPYVQYRIADTSCMVGIKGSR 293
AEM A+ N+LRQ +W F +GS G F K +++Y D ++ IK R
Sbjct: 108 AEMRNAKVINNLRQ-YWKFCQGSAGFFPKSWLEYFFKDCQDLLDIKVKR 155