BP921267
Clone id YMU001_000147_F10
Library
Length 161
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GATGGCAGATTAAGATTCCAGCGGCCTAAGTGCATCTCGGCTTGGGCAGACAGGCCTTGG
TGCAGTCGGTGTACTGGTTGACCTTAAGGCCCAGCTTGATGCCACACTTGTCAGAGAGGT
CGGAGACGCGGGCGGAAACGAGGTTGGGGATGCTGCGCGCG
■■Homology search results ■■ -
sp_hit_id Q42642
Definition sp|Q42642|NLTPB_BRAOT Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica
Align length 33
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921267|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F10.
(161 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q42642|NLTPB_BRAOT Non-specific lipid-transfer protein B OS=B... 30 2.9
sp|Q42615|NLTP2_BRANA Non-specific lipid-transfer protein 2 OS=B... 30 2.9
sp|Q43766|NLTP3_HORVU Non-specific lipid-transfer protein 3 OS=H... 29 6.4
sp|Q42614|NLTP1_BRANA Non-specific lipid-transfer protein 1 OS=B... 29 6.4

>sp|Q42642|NLTPB_BRAOT Non-specific lipid-transfer protein B
OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1
Length = 117

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2

Query: 160 ARSIPNLVSARVSDLSDKCGIKLGLKVNQYTDC 62
A S P L +AR + L CG+ + K+++ T+C
Sbjct: 81 ANSFPTLNAARAAGLPKACGVNIPYKISKSTNC 113


>sp|Q42615|NLTP2_BRANA Non-specific lipid-transfer protein 2
OS=Brassica napus GN=LTP2 PE=3 SV=1
Length = 117

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2

Query: 160 ARSIPNLVSARVSDLSDKCGIKLGLKVNQYTDC 62
A S P L +AR + L CG+ + K+++ T+C
Sbjct: 81 ANSFPTLNAARAAGLPKACGVNIPYKISKSTNC 113


>sp|Q43766|NLTP3_HORVU Non-specific lipid-transfer protein 3
OS=Hordeum vulgare GN=LTP3 PE=3 SV=1
Length = 118

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2

Query: 160 ARSIPNLVSARVSDLSDKCGIKLGLKVNQYTDCTK 56
A SI + +VS + KCG+ + ++ TDC K
Sbjct: 82 ATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNK 116


>sp|Q42614|NLTP1_BRANA Non-specific lipid-transfer protein 1
OS=Brassica napus GN=LTP1 PE=3 SV=1
Length = 117

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2

Query: 160 ARSIPNLVSARVSDLSDKCGIKLGLKVNQYTDC 62
A + P L +AR + L CG+ + K+++ T+C
Sbjct: 81 ANAFPTLNAARAAGLPKACGVNIPYKISKSTNC 113


tr_hit_id B8LRP3
Definition tr|B8LRP3|B8LRP3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 30
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921267|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F10.
(161 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LRP3|B8LRP3_PICSI Putative uncharacterized protein OS=Picea... 34 3.2

>tr|B8LRP3|B8LRP3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 127

Score = 34.3 bits (77), Expect = 3.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2

Query: 148 PNLVSARVSDLSDKCGIKLGLKVNQYTDCT 59
PN+ SA VS+L CG+ L K++ TDC+
Sbjct: 95 PNVNSAAVSNLPGSCGVNLPFKISPQTDCS 124