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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921268
Clone id YMU001_000147_F11
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTAAACGAATTCGCCCTTGAATATTACCTGCAGGTACTCGAGAAGGAGCCATCTTCTGGT
TTCTCAGATTTCCTGATGCAGCTCCAGCCACAAATGATTCATCAAATGACCCATTGGGAT
TCTCATTGTTTCACTTTGGAAGCCTTTCTACAGACGAGCAAGAGCTTACTATTCTTGCAA
AATCTGAGGAGCACATGAAGAGAAGCCTTTAAGCCACTGGATATGTCGTGTGGTAGGGCT
GTGCAACAGGAAGCTGCCGGAGCACCAAAATCAAGTCTACCTGTGGAAGAGTACAGTTTG
TTTGCAGCTACACCTTCTATTAGGTTTGGATTTTTCTAAAGCATAGGATTGTAAGAGTTG
GTATTGTGCCAGATGTAGTTGGAGCTACCTGCATACTCCAATGGAGTCATTTCATGGGTC
CTTGATGACTGAGTCGGCCTGTACAAGTAGTGTGAAGCGGATCCCTTTATTCAGTATTTT
TCTTATATTCAAGCAACATAGGTCATCATTCATTAATAAGACTCATTGGTGAACTTGGGC
TTTCGATT
■■Homology search results ■■ -
sp_hit_id Q9IAB0
Definition sp|Q9IAB0|VMDCO_AGKCO Zinc metalloproteinase/disintegrin OS=Agkistrodon contortrix contortrix
Align length 57
Score (bit) 34.3
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921268|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F11.
         (530 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9IAB0|VMDCO_AGKCO Zinc metalloproteinase/disintegrin OS=Agki...    34   0.38 
sp|Q805F6|VMDAB_AGKCO Zinc metalloproteinase/disintegrin OS=Agki...    34   0.38 
sp|Q805F4|DISB_AGKPI Zinc metalloproteinase/disintegrin OS=Agkis...    33   0.85 
sp|Q7SZE0|VMSAX_GLOSA Zinc metalloproteinase/disintegrin OS=Gloy...    32   2.5  
sp|Q9PVK9|VMMTD_AGKHB Zinc metalloproteinase/disintegrin OS=Agki...    30   5.5  
sp|Q1PHZ4|VMMP1_BOTJR Zinc metalloproteinase-disintegrin BjussuM...    30   7.2  
sp|Q90WC0|VMSA1_AGKHB Zinc metalloproteinase/disintegrin (Fragme...    30   9.4  
sp|Q9Y6W6|DUS10_HUMAN Dual specificity protein phosphatase 10 OS...    30   9.4  
sp|P55965|BYN_DROME T-related protein OS=Drosophila melanogaster...    30   9.4  

>sp|Q9IAB0|VMDCO_AGKCO Zinc metalloproteinase/disintegrin
           OS=Agkistrodon contortrix contortrix PE=1 SV=1
          Length = 483

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -1

Query: 293 VAANKLYSSTGRLDFGAPAASCCTALPHDISSGLKASLHVLLRFCKNSKLLLVCRKA 123
           V+ N+L  +    DF APA  CC A    +++G + +  +    CK  K   VCR+A
Sbjct: 404 VSGNELLETGEESDFDAPANPCCDAATCKLTTGSQCADGLCCDQCKFMKEGTVCRRA 460


>sp|Q805F6|VMDAB_AGKCO Zinc metalloproteinase/disintegrin
           OS=Agkistrodon contortrix contortrix PE=1 SV=1
          Length = 483

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -1

Query: 293 VAANKLYSSTGRLDFGAPAASCCTALPHDISSGLKASLHVLLRFCKNSKLLLVCRKA 123
           V+ N+L  +    DF APA  CC A    +++G + +  +    CK  K   VCR+A
Sbjct: 404 VSGNELLETGEESDFDAPANPCCDAATCKLTTGSQCADGLCCDQCKFMKEGTVCRRA 460


>sp|Q805F4|DISB_AGKPI Zinc metalloproteinase/disintegrin
           OS=Agkistrodon piscivorus piscivorus PE=1 SV=1
          Length = 483

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -1

Query: 293 VAANKLYSSTGRLDFGAPAASCCTALPHDISSGLKASLHVLLRFCKNSKLLLVCRKA 123
           V+ N+L+ +    DF APA  CC A    ++ G + +  +    CK  K   VC +A
Sbjct: 404 VSGNELWETGEESDFDAPANPCCDAATCKLTPGSQCAEGLCCDQCKFMKEGTVCHRA 460


>sp|Q7SZE0|VMSAX_GLOSA Zinc metalloproteinase/disintegrin
           OS=Gloydius saxatilis PE=2 SV=1
          Length = 483

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -1

Query: 293 VAANKLYSSTGRLDFGAPAASCCTALPHDISSGLKASLHVLLRFCKNSKLLLVCRKA 123
           V+ N+L  +    D G PA  CC A    +  G + +  +    CK ++   +CR+A
Sbjct: 404 VSGNELLETGEECDCGTPANPCCDAATCKLRPGAQCAEGLCCDQCKFTRAGKICRRA 460


>sp|Q9PVK9|VMMTD_AGKHB Zinc metalloproteinase/disintegrin
           OS=Agkistrodon halys brevicaudus PE=2 SV=1
          Length = 482

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -1

Query: 293 VAANKLYSSTGRLDFGAPAASCCTALPHDISSGLKASLHVLLRFCKNSKLLLVCRKA 123
           V+ N+L  +    D GAPA  CC A    +  G + +  +    C+  K   +CR A
Sbjct: 403 VSGNELLEAGVECDCGAPANPCCDAATCKLRPGAQCAEGLCCDQCRFMKEGTICRMA 459


>sp|Q1PHZ4|VMMP1_BOTJR Zinc metalloproteinase-disintegrin BjussuMP-1
           (Fragment) OS=Bothrops jararacussu PE=1 SV=1
          Length = 547

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 21/82 (25%), Positives = 33/82 (40%)
 Frame = -1

Query: 368 SSNYIWHNTNSYNPML*KNPNLIEGVAANKLYSSTGRLDFGAPAASCCTALPHDISSGLK 189
           S N        +NP    N  L+  V+ N+L  +    D GAP   CC A    +  G +
Sbjct: 317 SQNQYQTYLTKHNPQCILNEPLLT-VSGNELLEAGEECDCGAPENPCCDAATCKLRPGAQ 375

Query: 188 ASLHVLLRFCKNSKLLLVCRKA 123
            +  +    C+      +CR+A
Sbjct: 376 CAEGLCCDQCRFKGAGKICRRA 397


>sp|Q90WC0|VMSA1_AGKHB Zinc metalloproteinase/disintegrin (Fragment)
           OS=Agkistrodon halys brevicaudus PE=1 SV=1
          Length = 317

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = -1

Query: 293 VAANKLYSSTGRLDFGAPAASCCTALPHDISSGLKASLHVLLRFCKNSKLLLVCRKA 123
           V+ N+L  +    D G+P   CC A    +  G + +  +    C+  K   +CR+A
Sbjct: 238 VSGNELLEAGEECDCGSPGNPCCDAATCKLRQGAQCAEGLCCDQCRFMKEGTICRRA 294


>sp|Q9Y6W6|DUS10_HUMAN Dual specificity protein phosphatase 10
           OS=Homo sapiens GN=DUSP10 PE=1 SV=1
          Length = 482

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
 Frame = -1

Query: 428 LYRPTQSSRTHEMTPLEYAGSSNYIWHNTNSYNPML*KNPNLIEGVAANKLY--SSTGR- 258
           L RP +    +      Y GS+N     +NS+ P++     ++   AAN  Y  SS+G  
Sbjct: 14  LSRPVRPQDLNLCLDSSYLGSAN---PGSNSHPPVI--ATTVVSLKAANLTYMPSSSGSA 68

Query: 257 --LDFGAPAASCCTALPHD 207
             L+ G  +ASCCT   +D
Sbjct: 69  RSLNCGCSSASCCTVATYD 87


>sp|P55965|BYN_DROME T-related protein OS=Drosophila melanogaster
           GN=byn PE=1 SV=2
          Length = 697

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
 Frame = -1

Query: 446 GSASHYLYRPTQSSRTHEM---------TPLEYAGSSNYIWHN 345
           G+A+H +Y PT +S TH++         + L Y+ S    WHN
Sbjct: 531 GAAAHQVYHPTPTSPTHQLYTNAVLNAPSALSYSASG---WHN 570
tr_hit_id B0ACP8
Definition tr|B0ACP8|B0ACP8_9CLOT Putative uncharacterized protein OS=Clostridium bartlettii DSM 16795
Align length 86
Score (bit) 35.0
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921268|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F11.
         (530 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0ACP8|B0ACP8_9CLOT Putative uncharacterized protein OS=Clost...    35   2.4  
tr|Q09DU9|Q09DU9_STIAU Matrix-associated zinc metalloprotease Fi...    34   5.3  
tr|Q97Q05|Q97Q05_STRPN Putative uncharacterized protein OS=Strep...    33   6.9  
tr|A5LQT4|A5LQT4_STRPN Putative uncharacterized protein OS=Strep...    33   6.9  
tr|Q5WFB5|Q5WFB5_BACSK Choline/glycine betaine transporter OS=Ba...    33   9.0  
tr|B7C565|B7C565_9FIRM Putative uncharacterized protein (Fragmen...    33   9.0  

>tr|B0ACP8|B0ACP8_9CLOT Putative uncharacterized protein
           OS=Clostridium bartlettii DSM 16795 GN=CLOBAR_02413 PE=4
           SV=1
          Length = 923

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = -1

Query: 416 TQSSRTHEMTPLEYAGSSNYIWHNTNSYNPML*KNPNLIEGVAANKLYSSTGRLDFGAPA 237
           +Q+S T E  P+E  G+      N   YN +     N+I G A   + S      FG  A
Sbjct: 206 SQASLTGESEPIEKLGNIQEKNENITEYNNIAFMGSNIISGTATAVVVSVGDSTLFGKMA 265

Query: 236 ASCC-TALPHDISSGLKASLHVLLRF 162
           AS    A+    + G+ A   VL+RF
Sbjct: 266 ASVAEEAVETSFTKGVNAVSWVLIRF 291


>tr|Q09DU9|Q09DU9_STIAU Matrix-associated zinc metalloprotease FibA
           OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_5576 PE=4
           SV=1
          Length = 750

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 452 IKGSASHYLYRPTQSSRTHEMTPLEYAGSSNYIWHNTNS 336
           I G A  Y+  PTQ   +H+  P  Y GSS+Y   ++NS
Sbjct: 408 IPGDALRYMGNPTQDDSSHDYYPERYRGSSDYGGVHSNS 446


>tr|Q97Q05|Q97Q05_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae GN=SP_1428 PE=4 SV=1
          Length = 103

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +2

Query: 269 KSTVCLQLHLLLGLDFSKA*DCKSWY-CARCSWSYLHTPMESFHGSLMTES--ACTSSVK 439
           K T C+  H  L +   +  DCK +Y C RC  S  H P E +  SL+ +    C   +K
Sbjct: 11  KQTRCIHYHSKLDIIALQCYDCKKYYACYRCHDSLEHHPFEPYPLSLIQDKPILCGVCLK 70

Query: 440 RIPLFSIFLIFKQHRSS 490
                   L +KQ++ S
Sbjct: 71  -------LLTYKQYKES 80


>tr|A5LQT4|A5LQT4_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae SP6-BS73 GN=CGSSp6BS73_01188
           PE=4 SV=1
          Length = 103

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +2

Query: 269 KSTVCLQLHLLLGLDFSKA*DCKSWY-CARCSWSYLHTPMESFHGSLMTES--ACTSSVK 439
           K T C+  H  L +   +  DCK +Y C RC  S  H P E +  SL+ +    C   +K
Sbjct: 11  KQTRCIHYHSKLDIIALQCYDCKKYYACYRCHDSLEHHPFEPYPLSLIQDKPILCGVCLK 70

Query: 440 RIPLFSIFLIFKQHRSS 490
                   L +KQ++ S
Sbjct: 71  -------LLTYKQYKES 80


>tr|Q5WFB5|Q5WFB5_BACSK Choline/glycine betaine transporter
           OS=Bacillus clausii (strain KSM-K16) GN=ABC2410 PE=4
           SV=1
          Length = 548

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = +3

Query: 3   ILPAGTREGAIFW--------FLRFPDAAPATNDSSNDPLGFSLFHFG 122
           +  AG   G +FW        +   PDAAP T D++   + +++FH+G
Sbjct: 90  LFTAGMGIGLVFWGAAEPLSHYFAPPDAAPGTQDAAAQAMRYAIFHWG 137


>tr|B7C565|B7C565_9FIRM Putative uncharacterized protein (Fragment)
           OS=Roseburia intestinalis L1-82 GN=ROSINTL182_04170 PE=4
           SV=1
          Length = 72

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 335 KSWYCARCSWSYLHTPMESFHGSLMTESACTSSVKRIPLFSIFLIFK 475
           + W C  C W  L T ++  H  +   S CT S+  I    I +I K
Sbjct: 19  QGWSCPVCGWGTLTTYIDKIHQDMTEYSICTKSITNIDKDKIKVISK 65