BP921269
Clone id YMU001_000147_F12
Library
Length 551
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTATCAACATGAGGCAATGCCACTACTCATATCACTGATGTGTGTATATAGAAGTCCT
CAAGGCTCAAAGCTCCCCTTTCATGTTTGGAGCTTAAGGCACGTCATGTTGAAGTGGAGA
GAGACATGGTCTAAAGCTTGTGCTTCACAGCCAGGGGTGAGAGATGGATGCGGTCGAGAC
AAAATGGCAATGGGCGAGTATCAGCTGTGAGACCTTAATAAGGTCAATTTCCCCTGCTTC
AGTATCTAGGAATCATAGTTGGCATGGAGCGTCTCCTCTGAATTGAAAGCAAACACTCAT
GTTCCAACATGAAAATTTTGAGACCCCGCAGAATCGTCGTGGCAAATTTTCTTACAACAA
GTTTGCATACAATCTAACTGTTTTTCCTTATGCAGAGACAACAACACCATCAAAATTTTG
AAGGGTTAAAGTGGATGTTCCACTCTATCCTTTTATGCCATTTGATTTGACTTAGCAGTT
AAGAGTAGAAAAGACAAGTTCTGCAGAGTTTTTCTAGTAACACTGTTCATATTTAGATTC
AGTCATCATAC
■■Homology search results ■■ -
sp_hit_id Q80SU7
Definition sp|Q80SU7|GVIN1_MOUSE Interferon-induced very large GTPase 1 OS=Mus musculus
Align length 38
Score (bit) 30.8
E-value 4.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921269|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F12.
(551 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q80SU7|GVIN1_MOUSE Interferon-induced very large GTPase 1 OS=... 31 4.6

>sp|Q80SU7|GVIN1_MOUSE Interferon-induced very large GTPase 1 OS=Mus
musculus GN=Gvin1 PE=1 SV=1
Length = 2427

Score = 30.8 bits (68), Expect = 4.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1

Query: 10 HEAMPLLISLMCVYRSPQGSKLPFHVWSLRHVMLKWRE 123
H A+PL++ +P S++ F++WSLR + W++
Sbjct: 1002 HYALPLVVP------NPNTSQIEFYLWSLRQIRKSWQD 1033


tr_hit_id Q23R97
Definition tr|Q23R97|Q23R97_TETTH Protein kinase domain containing protein OS=Tetrahymena thermophila SB210
Align length 61
Score (bit) 33.5
E-value 7.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921269|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_F12.
(551 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q23R97|Q23R97_TETTH Protein kinase domain containing protein ... 33 7.7

>tr|Q23R97|Q23R97_TETTH Protein kinase domain containing protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00389910 PE=4
SV=1
Length = 1715

Score = 33.5 bits (75), Expect = 7.7
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2

Query: 227 ISPASVSRN-HSWHGASPLN*KQTLMFQHENFETPQNRRGKFSYNKFAYNLTVFPYAETT 403
I SVS N S +PL+ K+T H +F +PQ + KFS++ + N+T P A TT
Sbjct: 1366 IENKSVSSNVASSQAMTPLDLKKT----HSDFLSPQLKNNKFSFDSSSINIT--PQAHTT 1419

Query: 404 T 406
T
Sbjct: 1420 T 1420