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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921276
Clone id YMU001_000147_G10
Library
Length 500
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGGTTGCTTTGACTCACTCGTGTTCCTATTCGGCAAACCAATCCCAATCTTCTTGGATG
CCCTCCTCAAAGCGTAGAGGAAAAAAAATTGTCGGAAAATTCAGCCTTGAATTGAATCCA
AGTCTTGTTGTAAGTTCCTTGCAGAGCCTTGGTATACCACCAAATACTTGCAATCCCCTT
GAGTTGTTTGGTCACATGCCTCACCTTTGACGCTTCTCAAAAATTGCCATTTGCAAAGGC
AACTTCATACTGTCGAATGATAGCGGTAGCTTTCAGGACATCTTCCCTTCCGTCAAAAGT
ATCAAACTTGACCGGAGGGTTCTGAGGTCTAAAGACCTTCATATCCTCACCGAAATGACG
GGATTTCTTGGCTATGGTTCTGGATTGATGTTCATGGATGTCTTCTGGGTTCTGAAGTAT
CTCGAGCATTCCGCTCCTCAGATTCTCTAGGTTCTTGAGCATCATGCTCTTGTCACCTTC
GCAATTCGCGGCCGCGAATT
■■Homology search results ■■ -
sp_hit_id Q9VPC0
Definition sp|Q9VPC0|KP58_DROME Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster
Align length 77
Score (bit) 31.2
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921276|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_G10.
         (468 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VPC0|KP58_DROME Serine/threonine-protein kinase PITSLRE OS=...    31   2.3  
sp|A1KSP4|ARLY_NEIMF Argininosuccinate lyase OS=Neisseria mening...    30   4.0  
sp|Q9K0G8|ARLY_NEIMB Argininosuccinate lyase OS=Neisseria mening...    30   4.0  
sp|Q9JVG7|ARLY_NEIMA Argininosuccinate lyase OS=Neisseria mening...    30   4.0  
sp|A9M2R4|ARLY_NEIM0 Argininosuccinate lyase OS=Neisseria mening...    30   4.0  
sp|P11619|NEP_I83A1 Nuclear export protein OS=Influenza A virus ...    30   5.2  
sp|Q3YPZ0|NEP_I71A1 Nuclear export protein OS=Influenza A virus ...    30   6.8  
sp|A4VJR9|GLND_PSEU5 [Protein-PII] uridylyltransferase OS=Pseudo...    30   6.8  
sp|A7Z4E6|MURB_BACA2 UDP-N-acetylenolpyruvoylglucosamine reducta...    29   8.9  
sp|Q4ZWT0|GLND_PSEU2 [Protein-PII] uridylyltransferase OS=Pseudo...    29   8.9  
sp|Q886P5|GLND_PSESM [Protein-PII] uridylyltransferase OS=Pseudo...    29   8.9  

>sp|Q9VPC0|KP58_DROME Serine/threonine-protein kinase PITSLRE
           OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1
          Length = 952

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/77 (25%), Positives = 41/77 (53%)
 Frame = -3

Query: 466 EGDKSMMLKNLENLRSGMLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQNPPVKFD 287
           E ++++   + +N    ++E+L +PE  H HQ +  + +S+ + E+++V R +  P   +
Sbjct: 235 ERERTVRSTHKQNRHDRVIELLDSPEQEHHHQHQHKSHRSK-WREEVEVIR-RKVPEDLE 292

Query: 286 TFDGREDVLKATAIIRQ 236
               RE +L A    RQ
Sbjct: 293 LLARREKLLAAERESRQ 309


>sp|A1KSP4|ARLY_NEIMF Argininosuccinate lyase OS=Neisseria
           meningitidis serogroup C / serotype 2a (strain ATCC
           700532 / FAM18) GN=argH PE=3 SV=1
          Length = 458

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -3

Query: 448 MLKNLENLRSGMLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQNPPVKFD 287
           M + LE +RSG +E   + ED+H +  R +  K    G+ +   R +N  V  D
Sbjct: 64  MAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGKRLHTGRSRNDQVATD 117


>sp|Q9K0G8|ARLY_NEIMB Argininosuccinate lyase OS=Neisseria
           meningitidis serogroup B GN=argH PE=3 SV=1
          Length = 458

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -3

Query: 448 MLKNLENLRSGMLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQNPPVKFD 287
           M + LE +RSG +E   + ED+H +  R +  K    G+ +   R +N  V  D
Sbjct: 64  MAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGKRLHTGRSRNDQVATD 117


>sp|Q9JVG7|ARLY_NEIMA Argininosuccinate lyase OS=Neisseria
           meningitidis serogroup A GN=argH PE=3 SV=1
          Length = 458

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -3

Query: 448 MLKNLENLRSGMLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQNPPVKFD 287
           M + LE +RSG +E   + ED+H +  R +  K    G+ +   R +N  V  D
Sbjct: 64  MAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGKRLHTGRSRNDQVATD 117


>sp|A9M2R4|ARLY_NEIM0 Argininosuccinate lyase OS=Neisseria
           meningitidis serogroup C (strain 053442) GN=argH PE=3
           SV=1
          Length = 458

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -3

Query: 448 MLKNLENLRSGMLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQNPPVKFD 287
           M + LE +RSG +E   + ED+H +  R +  K    G+ +   R +N  V  D
Sbjct: 64  MAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGKRLHTGRSRNDQVATD 117


>sp|P11619|NEP_I83A1 Nuclear export protein OS=Influenza A virus
           (strain A/Chile/1/1983 H1N1) GN=NS PE=3 SV=1
          Length = 121

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
 Frame = +2

Query: 200 FSKIAICKGNFILSNDSGSFQDIFPSVKSIKLDR-----RVLRSKDLHILTEMTGFLGYG 364
           F  I +      L + SG    +    +S+KL R      V+R  DLH L    G     
Sbjct: 9   FQDILMRMSKMQLGSSSGDLNGMITQFESLKLYRDSLGEAVMRMGDLHSLQNRNGKWREQ 68

Query: 365 SGLMFMDVFWVLKYLEH 415
            G  F ++ W+++ + H
Sbjct: 69  LGQKFEEIRWLIEEVRH 85


>sp|Q3YPZ0|NEP_I71A1 Nuclear export protein OS=Influenza A virus
           (strain A/Memphis/1/1971 H3N2) GN=NS PE=3 SV=1
          Length = 121

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
 Frame = +2

Query: 200 FSKIAICKGNFILSNDSGSFQDIFPSVKSIKLDR-----RVLRSKDLHILTEMTGFLGYG 364
           F  I +      L + S     +    +S+KL R      V+R  DLH L    G     
Sbjct: 9   FQDILLRMSKMQLGSSSEDLNGMITQFESLKLYRDSLGEAVMRMGDLHSLQNRNGKWREQ 68

Query: 365 SGLMFMDVFWVLKYLEH 415
            GL F ++ W+++ + H
Sbjct: 69  LGLKFEEIRWLIEEVRH 85


>sp|A4VJR9|GLND_PSEU5 [Protein-PII] uridylyltransferase
           OS=Pseudomonas stutzeri (strain A1501) GN=glnD PE=3 SV=1
          Length = 900

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -3

Query: 442 KNLENLRSGMLEILQNPEDIHEHQSRTIAKKSRHF 338
           + +E +RSG++  L+NP+D      R + ++ +HF
Sbjct: 764 ERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHF 798


>sp|A7Z4E6|MURB_BACA2 UDP-N-acetylenolpyruvoylglucosamine reductase
           OS=Bacillus amyloliquefaciens (strain FZB42) GN=murB
           PE=3 SV=1
          Length = 303

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 17/70 (24%), Positives = 33/70 (47%)
 Frame = +2

Query: 140 IPPNTCNPLELFGHMPHL*RFSKIAICKGNFILSNDSGSFQDIFPSVKSIKLDRRVLRSK 319
           +P +  N +E  G   H    +K++   GNFI++    + +D+   ++ +K   R     
Sbjct: 231 LPDHAGNLVEKAGLKGHQIGGAKVSEMHGNFIVNAGGATAKDVLDLIEYVKKTIREQYDV 290

Query: 320 DLHILTEMTG 349
           D+H   E+ G
Sbjct: 291 DMHTEVEIIG 300


>sp|Q4ZWT0|GLND_PSEU2 [Protein-PII] uridylyltransferase
           OS=Pseudomonas syringae pv. syringae (strain B728a)
           GN=glnD PE=3 SV=1
          Length = 898

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -3

Query: 442 KNLENLRSGMLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQ 308
           + ++++R G+ E L+NP+D      R + ++ +HF      F PQ
Sbjct: 763 ERIQDIREGLTEALRNPDDYPTIIKRRVPRQLKHF-----AFAPQ 802
tr_hit_id Q2R193
Definition tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica
Align length 93
Score (bit) 40.0
E-value 0.059
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921276|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_G10.
         (468 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gy...    40   0.059
tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1    40   0.059
tr|Q84KB1|Q84KB1_CUCME Gag-protease polyprotein OS=Cucumis melo ...    40   0.077
tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gy...    39   0.17 
tr|Q2QTW2|Q2QTW2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    38   0.22 
tr|B4FMK6|B4FMK6_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.38 
tr|A5AZ16|A5AZ16_VITVI Putative uncharacterized protein OS=Vitis...    37   0.38 
tr|Q4RQT6|Q4RQT6_TETNG Chromosome 2 SCAF15004, whole genome shot...    37   0.65 
tr|Q7G774|Q7G774_ORYSJ Putative polyprotein (Retrotransposon pro...    36   0.85 
tr|Q4QXS8|Q4QXS8_HORVD Polyprotein OS=Hordeum vulgare var. disti...    36   0.85 
tr|Q01M74|Q01M74_ORYSA H0616A11.5 protein OS=Oryza sativa GN=H06...    36   0.85 
tr|Q8LLB6|Q8LLB6_HORVU Sukkula-1b polyprotein OS=Hordeum vulgare...    36   1.1  
tr|Q8LLB4|Q8LLB4_HORVU Sukkula-1a polyprotein OS=Hordeum vulgare...    36   1.1  
tr|A5JSC4|A5JSC4_MAIZE Polyprotein OS=Zea mays PE=4 SV=1               36   1.1  
tr|A2YTU7|A2YTU7_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.1  
tr|Q2R4W2|Q2R4W2_ORYSJ Retrotransposon, putative, centromere-spe...    35   1.4  
tr|Q2R1L3|Q2R1L3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    35   1.4  
tr|Q2QTC9|Q2QTC9_ORYSJ Retrotransposon protein, putative, Ty3-gy...    35   1.4  
tr|Q2R3T2|Q2R3T2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    35   1.9  
tr|A5B1A3|A5B1A3_VITVI Putative uncharacterized protein OS=Vitis...    35   1.9  
tr|Q852G2|Q852G2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    34   3.2  
tr|Q7F2E9|Q7F2E9_ORYSJ Putative polyprotein OS=Oryza sativa subs...    34   3.2  
tr|Q6F330|Q6F330_ORYSJ Putative polyprotein OS=Oryza sativa subs...    34   3.2  
tr|Q53J53|Q53J53_ORYSJ Retrotransposon protein, putative, Ty3-gy...    34   3.2  
tr|Q10JR0|Q10JR0_ORYSJ Retrotransposon protein, putative, Ty3-gy...    34   3.2  
tr|A5BDH9|A5BDH9_VITVI Putative uncharacterized protein OS=Vitis...    34   3.2  
tr|Q7XUI0|Q7XUI0_ORYSJ OSJNBa0020J04.2 protein OS=Oryza sativa s...    34   4.2  
tr|Q6UUS2|Q6UUS2_ORYSJ Putative gag-pol protein OS=Oryza sativa ...    34   4.2  
tr|Q2QQZ1|Q2QQZ1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    34   4.2  
tr|Q0J6I2|Q0J6I2_ORYSJ Os08g0317300 protein OS=Oryza sativa subs...    34   4.2  

>tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g39950 PE=4 SV=1
          Length = 1712

 Score = 40.0 bits (92), Expect = 0.059
 Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
 Frame = -3

Query: 340 FGEDMKVFRPQNPPVKFDTFDGREDVLKATAIIRQYEVAFANGNF*EASKVRHVTKQLKG 161
           FGE M+      PP    TF   E+ + A   +R  E         EA KV     QL+G
Sbjct: 389 FGEFMRT----KPP----TFATAEEPMDAEDCLRVIEKKLTLVRVREADKVIFAANQLEG 440

Query: 160 IASIWW--YTKALQ-GTYNKTWIQFKAEFSDNF 71
            A  WW  Y +A + G    TW +F A F +NF
Sbjct: 441 PAGDWWDTYKEAREDGAGEPTWEEFTAAFRENF 473


>tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1
          Length = 1469

 Score = 40.0 bits (92), Expect = 0.059
 Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
 Frame = -3

Query: 337 GEDMKVFRPQNPPVKFDTFDGREDVLKATAIIRQYEVAFANGNF*EASKVRHVTKQLKGI 158
           G  +  F    PP    TF   E+ + A   +R  E         EA +V   T QL+G 
Sbjct: 45  GSSLGEFMRAKPP----TFSTAEEPMDAEDWLRVIEKKLTLVRVREADRVVFATNQLEGP 100

Query: 157 ASIWWYT---KALQGTYNKTWIQFKAEFSDNF 71
           AS WW T      +     TW +F A F +NF
Sbjct: 101 ASDWWDTYKETRAEDAGEPTWEEFTAAFRENF 132


>tr|Q84KB1|Q84KB1_CUCME Gag-protease polyprotein OS=Cucumis melo
           PE=4 SV=1
          Length = 429

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = -3

Query: 328 MKVFRPQNPPVKFDTFDGR-EDVLKATAIIRQYEVAFANGNF*EASKVRHVTKQLKGIAS 152
           ++ FR  NP     TFDG  ED  +A   +   E  F      E  KV+     L    +
Sbjct: 60  LRDFRKYNPT----TFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGT 115

Query: 151 IWWYT--KALQGTYNK-TWIQFKAEFSDNFFSSTL 56
            WW T  + L G  ++ TW QFK  F   FFS++L
Sbjct: 116 AWWETTERMLGGDVSQITWQQFKESFYAKFFSASL 150


>tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g28690 PE=4 SV=1
          Length = 1470

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = -3

Query: 340 FGEDMKVFRPQNPPVKFDTFDGREDVLKATAIIRQYEVAFANGNF*EASKVRHVTKQLKG 161
           FGE M+      PP    TF   ++ ++A   +R  E         EA KV     QL+G
Sbjct: 48  FGEFMRT----KPP----TFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEG 99

Query: 160 IASIWW--YTKALQ-GTYNKTWIQFKAEFSDNF 71
            A  WW  Y +A + G    TW +F A F +NF
Sbjct: 100 PAGDWWDTYKEAREDGAGEPTWEEFTAAFRENF 132


>tr|Q2QTW2|Q2QTW2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g18320 PE=4 SV=1
          Length = 1226

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
 Frame = -3

Query: 352 KSRHFGEDMKVFRPQNPPVKFDTFDGREDVLKATAIIRQYEVAFANGNF*EASKVRHVTK 173
           +  H G     F    PP    TF   ++ ++A   +R  E         EA KV     
Sbjct: 40  QGNHEGSSFGEFMSTKPP----TFTTTDEPMEAEDWLRIIEKKLTLIRVREADKVIFAVN 95

Query: 172 QLKGIASIWW--YTKALQGTYNK-TWIQFKAEFSDNF 71
           QL+G A  WW  Y +A +    + TW +F A F +NF
Sbjct: 96  QLEGPAGDWWDTYKEAREEDAGEPTWEEFTAAFRENF 132


>tr|B4FMK6|B4FMK6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 441

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
 Frame = -3

Query: 319 FRPQNPPVKFDTFDGREDVLKATAIIRQYEVAFA--NGNF*EASKVRHVTKQLKGIASIW 146
           F    PP+    F   ED L A   +R  E  F   +G   E +KVR  T+QL+G A  W
Sbjct: 63  FLSTQPPL----FTRAEDPLDADVWLRVVESKFPLLHGVCSEVTKVRFATQQLRGPARTW 118

Query: 145 W-YTKALQGTYNKT-WIQFKAEF 83
           W +  A+Q    +  W +FKA F
Sbjct: 119 WDHFLAMQPEDREVEWREFKAAF 141


>tr|A5AZ16|A5AZ16_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016761 PE=4 SV=1
          Length = 1404

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
 Frame = -3

Query: 415 MLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQNPPVKFD---TFDGREDVLKATAI 245
           ++ +  + E   E  +  +  + +   +++ +++   P VK     TF G+ D  +    
Sbjct: 103 VMSMFASVESRMEALTARVEARDQEIRQELAIYKTAAPRVKVPKPHTFSGKRDAKEIDNF 162

Query: 244 IRQYEVAF-ANGNF*EASKVRHVTKQLKGIASIWWYTKAL---QGTYN-KTWIQFKAEFS 80
           +   E  F A     EA+KVR  T  L   A++WW+ +     +GT    TW  FK E  
Sbjct: 163 LWHMERYFEAIALTDEATKVRTTTLYLTDNATLWWHRRFADIERGTCTIBTWDAFKREIK 222

Query: 79  DNFF 68
             F+
Sbjct: 223 RQFY 226


>tr|Q4RQT6|Q4RQT6_TETNG Chromosome 2 SCAF15004, whole genome shotgun
            sequence OS=Tetraodon nigroviridis GN=GSTENG00030465001
            PE=4 SV=1
          Length = 1605

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
 Frame = -3

Query: 466  EGDKSMMLKNLENL--------RSGMLEILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRP 311
            E D+SM  + +E L        +   L+  Q  +   E Q RT+  K++      ++  P
Sbjct: 1207 EDDRSMATEQIEPLPKVLTPAKKPAALQKKQTQQKKTEKQERTVKPKAKAMRPKGRISTP 1266

Query: 310  QNPPVKFD-TFDGREDVLKATAIIRQYEVA 224
            +  PV+ +  +  REDV K  A+IR+ E A
Sbjct: 1267 ERKPVRTEPVYIPREDVKKKKAVIRKTEFA 1296


>tr|Q7G774|Q7G774_ORYSJ Putative polyprotein (Retrotransposon
           protein, putative, Ty3-gypsy subclass) OS=Oryza sativa
           subsp. japonica GN=OSJNBa0034B05.13 PE=4 SV=1
          Length = 1569

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = -3

Query: 340 FGEDMKVFRPQNPPVKFDTFDGREDVLKATAIIRQYEVAFANGNF*EASKVRHVTKQLKG 161
           FGE M+      PP    TF   +  ++A   +R  E         EA KV  V  QL+G
Sbjct: 259 FGEFMRT----KPP----TFAMADKPMEAEDWLRIIEKKLTLVRVREADKVIFVVNQLEG 310

Query: 160 IASIWW--YTKALQGTYNK-TWIQFKAEFSDNF 71
            A  WW  Y +A +    + TW +F A F +NF
Sbjct: 311 PAGDWWDTYKEAREEDAGEPTWEEFTAAFHENF 343


>tr|Q4QXS8|Q4QXS8_HORVD Polyprotein OS=Hordeum vulgare var.
           distichum PE=4 SV=1
          Length = 1486

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 1/117 (0%)
 Frame = -3

Query: 406 ILQNPEDIHEHQSRTIAKKSRHFGEDMKVFRPQNPPVKFDTFDGREDVLKATAIIRQYEV 227
           +LQ  ++   HQ     +   HF   +  F    P     TF   +    A   IR    
Sbjct: 52  LLQLIQERANHQQGNFQQGGNHFAS-LSQFLSNQPR----TFTSCDQPFDAEDWIRDMNK 106

Query: 226 AFANGNF*EASKVRHVTKQLKGIASIWW-YTKALQGTYNKTWIQFKAEFSDNFFSST 59
                N      V+  T QLKG ASIWW + K  +G    +W +F  +F  ++  S+
Sbjct: 107 HSECSNVRPEDYVKFATFQLKGQASIWWQHLKDSRGGRVMSWDEFCRDFRSHYIPSS 163