BP921285
Clone id YMU001_000147_H07
Library
Length 230
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GATGGAACTACGAACACCTTCACAACCACAGCAGAAGTATTGACCTCGCTCCCGTCTTCC
AAACATCACGCAATTGTCATTTTAATCGGCGACAAACGCCTTAGGAATGACGATGGAAGC
ACCTCCAAATTTGAGCTCAAAATAGCCACAGGCCTTCAGCACCAGAGAAAGAACAAGAAT
CCCATTGATATTCATTTGCTGCACGATAGACTTATGATTATGATGCAGAT
■■Homology search results ■■ -
sp_hit_id Q90640
Definition sp|Q90640|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallus gallus
Align length 57
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921285|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_H07.
(230 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q90640|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallu... 32 1.3
sp|Q54JL7|CNRN_DICDI Phosphatidylinositol-3,4,5-trisphosphate 3-... 31 1.7
sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus m... 31 2.2
sp|Q54M70|DNPEP_DICDI Aspartyl aminopeptidase OS=Dictyostelium d... 29 8.5
sp|Q657B3|C3H7_ORYSJ Zinc finger CCCH domain-containing protein ... 29 8.5

>sp|Q90640|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallus
gallus GN=KIF4 PE=2 SV=1
Length = 1225

Score = 31.6 bits (70), Expect = 1.3
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1

Query: 13 NTFTTTAEVLTSLPSSKHHAIVILIGDKRLRNDDGST--SKFELKIATGLQHQRKNK 177
N T A + SS+ HAI + D++ +ND S+ SK L G + Q+K K
Sbjct: 196 NNCRTVASTAMNSQSSRSHAIFTICIDQKKKNDKNSSFHSKLHLVDLAGSERQKKTK 252


>sp|Q54JL7|CNRN_DICDI Phosphatidylinositol-3,4,5-trisphosphate
3-phosphatase cnrN OS=Dictyostelium discoideum GN=cnrN
PE=1 SV=1
Length = 639

Score = 31.2 bits (69), Expect = 1.7
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +1

Query: 7 TTNTFTTTAEVLTSLPSSKHHAIVILI 87
TT T TTT TSLPSS+H ILI
Sbjct: 407 TTTTTTTTTTTTTSLPSSEHSTPQILI 433


>sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus
musculus GN=Kif4 PE=2 SV=2
Length = 1231

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1

Query: 13 NTFTTTAEVLTSLPSSKHHAIVILIGDKRLRNDDGST--SKFELKIATGLQHQRKNK 177
N T A + SS+ HAI + ++R +ND S+ SK L G + Q+K K
Sbjct: 196 NNSRTVASTAMNSQSSRSHAIFTISIEQRKKNDKNSSFRSKLHLVDLAGSERQKKTK 252


>sp|Q54M70|DNPEP_DICDI Aspartyl aminopeptidase OS=Dictyostelium
discoideum GN=dnpep PE=3 SV=1
Length = 484

Score = 28.9 bits (63), Expect = 8.5
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +1

Query: 7 TTNTFTTTAEVLTSLP------SSKHHAIVILIGDKRLRNDDGSTSKFELKI 144
+T T TTT TS P ++KHHA+++ + K L G F+L +
Sbjct: 193 STTTTTTTESPKTSDPQDVNSSTTKHHAVLLELLSKELGCSVGDIQNFDLSV 244


>sp|Q657B3|C3H7_ORYSJ Zinc finger CCCH domain-containing protein 7
OS=Oryza sativa subsp. japonica GN=Os01g0572100 PE=2
SV=1
Length = 698

Score = 28.9 bits (63), Expect = 8.5
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1

Query: 28 TAEVLTSLPSSKHHAIVILIGDKRLRNDDGSTSKFELKIATGLQHQRKNKNPIDIHLLH 204
+ E TS+P KHH+I+ K L G+ K ++I G+Q NK D +LH
Sbjct: 549 SGEPATSVPI-KHHSIL-----KNLAGISGNAQKVPVRIPRGIQFLPFNKARPDSSILH 601


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921285|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_H07.
(230 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******