BP921286 |
Clone id |
YMU001_000147_H10 |
Library |
YMU01 |
Length |
286 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000147_H10. |
Accession |
BP921286 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TCCATGTGCATTTTCTCTCTTTGGGACACACCGACAAATAGCCCAGCATGTTGCTGCATG ATTGGAACCATCTCCTCATCCAGAAAATGAGCACCAAGCGTAAGGGTTTCTGAATCAGGC CCCCTTCCTTTATACAAGGATTTAAAAGCATCCCTGTTCTTCTGCAAGTAAGAGAAGGCC TCTGCTTTGCTTAGGGCTTCATCAATTATTGCACAATAGGTGAAAATGCCATCTATGATG CAGATGAATCTGCGCTGATTAGTCATGTGACTGAATTTACTATGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23429 |
Definition |
sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana |
Align length |
84 |
Score (bit) |
43.1 |
E-value |
0.0004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TZJ4 |
Definition |
tr|A9TZJ4|A9TZJ4_PHYPA VAMP-like protein OS=Physcomitrella patens subsp. patens |
Align length |
90 |
Score (bit) |
67.4 |
E-value |
3.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921286|Adiantum capillus-veneris mRNA, clone: YMU001_000147_H10. (286 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TZJ4|A9TZJ4_PHYPA VAMP-like protein OS=Physcomitrella paten... 67 3e-10 tr|A9T8L7|A9T8L7_PHYPA VAMP-like protein OS=Physcomitrella paten... 66 8e-10 tr|Q9STP2|Q9STP2_ARATH Putative uncharacterized protein T27E11.8... 48 3e-04 tr|Q9LVV3|Q9LVV3_ARATH Genomic DNA, chromosome 5, P1 clone:MNB8 ... 48 3e-04 tr|Q9SN26|Q9SN26_ARATH Putative uncharacterized protein F28M11.9... 46 0.001 tr|Q84VZ3|Q84VZ3_ARATH At5g52990 (Putative uncharacterized prote... 45 0.002 tr|A9P2K7|A9P2K7_PICSI Putative uncharacterized protein OS=Picea... 45 0.002 tr|A9TZW1|A9TZW1_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella ... 44 0.003 tr|A9SDL2|A9SDL2_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella ... 43 0.009 tr|A9P970|A9P970_POPTR Putative uncharacterized protein OS=Popul... 43 0.009 tr|B7FI15|B7FI15_MEDTR Putative uncharacterized protein OS=Medic... 42 0.012 tr|A7NW41|A7NW41_VITVI Chromosome chr5 scaffold_2, whole genome ... 42 0.012 tr|A9NUI3|A9NUI3_PICSI Putative uncharacterized protein OS=Picea... 42 0.015 tr|A9TFG8|A9TFG8_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella ... 42 0.020 tr|A9NRR4|A9NRR4_PICSI Putative uncharacterized protein OS=Picea... 42 0.020 tr|B7FI10|B7FI10_MEDTR Putative uncharacterized protein OS=Medic... 41 0.034 tr|B7FGH4|B7FGH4_MEDTR Putative uncharacterized protein OS=Medic... 41 0.034 tr|A5BQJ0|A5BQJ0_VITVI Putative uncharacterized protein (Chromos... 41 0.034 tr|B3TLT3|B3TLT3_ELAGV Synaptobrevin 1 OS=Elaeis guineensis var.... 40 0.076 tr|A9TMZ3|A9TMZ3_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella ... 40 0.076 tr|A9TGQ9|A9TGQ9_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella ... 38 0.29 tr|A7QTI2|A7QTI2_VITVI Chromosome undetermined scaffold_168, who... 38 0.29 tr|A5BSN2|A5BSN2_VITVI Putative uncharacterized protein OS=Vitis... 38 0.29 tr|Q8H3D2|Q8H3D2_ORYSJ Os07g0249200 protein OS=Oryza sativa subs... 37 0.50 tr|Q7X9C5|Q7X9C5_PYRPY Synptobrevin-related protein (Fragment) O... 37 0.50 tr|B8B4S2|B8B4S2_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.50 tr|A3BI92|A3BI92_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.50 tr|A9NNA8|A9NNA8_PICSI Putative uncharacterized protein OS=Picea... 37 0.65 tr|B6T746|B6T746_MAIZE Vesicle-associated membrane protein 725 O... 36 1.1 tr|B6U039|B6U039_MAIZE Putative uncharacterized protein OS=Zea m... 35 1.4
>tr|A9TZJ4|A9TZJ4_PHYPA VAMP-like protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226941 PE=4 SV=1 Length = 265
Score = 67.4 bits (163), Expect = 3e-10 Identities = 35/90 (38%), Positives = 50/90 (55%) Frame = -3
Query: 284 HSKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSET 105 H +FS+ QR FI +ID F YCAI+DEAL K + F +L++ RD FK L + RG D Sbjct: 46 HLQFSYTIKQRMFIFLIDSPFIYCAIVDEALGKGKTFGFLERVRDEFKILIRSRGLDPMR 105
Query: 104 LTLGAHFLDEEMVPIMQQHAGLFVGVSQRE 15 L A + + + + VG+ Q+E Sbjct: 106 LDYNA--MSSDFAGVFKHLVKPLVGIPQKE 133
>tr|A9T8L7|A9T8L7_PHYPA VAMP-like protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228770 PE=4 SV=1 Length = 217
Score = 66.2 bits (160), Expect = 8e-10 Identities = 34/90 (37%), Positives = 53/90 (58%) Frame = -3
Query: 284 HSKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSET 105 H++F++ QR F+ +IDG FTYCA++DEAL K ++ +L++ RD FK L + RG D Sbjct: 45 HNQFTYTIKQRMFMFLIDGPFTYCAVVDEALGKGKSIWFLERVRDEFKLLIRSRGLDG-- 102
Query: 104 LTLGAHFLDEEMVPIMQQHAGLFVGVSQRE 15 + L L + + Q VG+ Q+E Sbjct: 103 MGLEKMSLAYDFAGVFNQLVKPLVGIPQKE 132
>tr|Q9STP2|Q9STP2_ARATH Putative uncharacterized protein T27E11.80 (At4g27840/T27E11_80) (Putative uncharacterized protein AT4g27840) OS=Arabidopsis thaliana GN=AT4g27840 PE=2 SV=1 Length = 260
Score = 47.8 bits (112), Expect = 3e-04 Identities = 24/82 (29%), Positives = 43/82 (52%) Frame = -3
Query: 284 HSKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSET 105 HS SH ++R + IIDG+F+Y AI+DE ++K+E+ + + A +SL + Sbjct: 46 HSMISHTVHKRTYALIIDGLFSYFAILDEVVAKSESVWLFNRLKSATESLMEDGSTADSL 105
Query: 104 LTLGAHFLDEEMVPIMQQHAGL 39 H L ++ P+ + A + Sbjct: 106 DNPTQHCLQSKLDPVFAEIAAI 127
>tr|Q9LVV3|Q9LVV3_ARATH Genomic DNA, chromosome 5, P1 clone:MNB8 OS=Arabidopsis thaliana PE=4 SV=1 Length = 272
Score = 47.8 bits (112), Expect = 3e-04 Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%) Frame = -3
Query: 284 HSKFSHMTNQRRF-ICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSE 108 HS FSH +++ + I D F Y +I DE++ K E+F L + R A + L K G D E Sbjct: 46 HSMFSHTVHKKTYTFAIDDDSFVYFSISDESMEKPESFWVLNRLRSAIEDLIKDGGSDVE 105
Query: 107 TL-TLGAHFLDEEMVPIMQQHAGL 39 TL +H L ++ P+ + G+ Sbjct: 106 TLINPVSHCLQLKLDPVFAEIVGV 129
>tr|Q9SN26|Q9SN26_ARATH Putative uncharacterized protein F28M11.90 (Putative uncharacterized protein At4g10170) (At4g10170) OS=Arabidopsis thaliana GN=AT4g10170 PE=2 SV=1 Length = 254
Score = 45.8 bits (107), Expect = 0.001 Identities = 22/76 (28%), Positives = 41/76 (53%) Frame = -3
Query: 284 HSKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSET 105 H+ + +RRF +I F Y AI+DE L ++ +L+ RD FK + S T Sbjct: 45 HTWYFETIGKRRFGFLIGDGFVYFAIVDEVLKRSSVLKFLEHLRDEFKKAARENSRGSFT 104
Query: 104 LTLGAHFLDEEMVPIM 57 +G+ +++++VP++ Sbjct: 105 AMIGSINVEDQLVPVV 120
>tr|Q84VZ3|Q84VZ3_ARATH At5g52990 (Putative uncharacterized protein At5g52990) OS=Arabidopsis thaliana GN=At5g52990 PE=2 SV=1 Length = 272
Score = 45.1 bits (105), Expect = 0.002 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Frame = -3
Query: 284 HSKFSHMTNQRRF-ICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSE 108 HS FSH +++ + I D F Y +I E++ K E+F L + R A + L K G D E Sbjct: 46 HSMFSHTVHKKTYTFAIDDDSFVYFSISGESMEKPESFWVLNRLRSAIEDLIKDGGSDVE 105
Query: 107 TL-TLGAHFLDEEMVPIMQQHAGL 39 TL +H L ++ P+ + G+ Sbjct: 106 TLINPVSHCLQLKLDPVFAEIVGV 129
>tr|A9P2K7|A9P2K7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 219
Score = 44.7 bits (104), Expect = 0.002 Identities = 23/78 (29%), Positives = 41/78 (52%) Frame = -3
Query: 281 SKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSETL 102 +KF++ + F ++D F + + DEA + F +L++ ++ FK Y GR S Sbjct: 44 NKFTYTCDNHTFNYLVDDGFVFLVVSDEAAGRQVPFLFLERVKEDFKRRYGGRAETSM-- 101
Query: 101 TLGAHFLDEEMVPIMQQH 48 AH LD++ PI++ H Sbjct: 102 ---AHSLDKDYGPILRDH 116
>tr|A9TZW1|A9TZW1_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella patens subsp. patens GN=VAMP72A2 PE=4 SV=1 Length = 220
Score = 44.3 bits (103), Expect = 0.003 Identities = 22/79 (27%), Positives = 43/79 (54%) Frame = -3
Query: 284 HSKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSET 105 ++KF++ ++ F +++ +TY + DE + F++L++ ++ FK Y G DS Sbjct: 43 NNKFTYTCDRHTFNYLVEEGYTYLVVADEEFGRQIPFAFLERVKEDFKRRYAGGKADSAI 102
Query: 104 LTLGAHFLDEEMVPIMQQH 48 AH LD+E P ++ H Sbjct: 103 ----AHSLDKEFGPKLKDH 117
>tr|A9SDL2|A9SDL2_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella patens subsp. patens GN=VAMP72B3 PE=4 SV=1 Length = 238
Score = 42.7 bits (99), Expect = 0.009 Identities = 22/78 (28%), Positives = 43/78 (55%) Frame = -3
Query: 281 SKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSETL 102 SK +++ ++ F ++ FT+ + +EAL + F++L++ +D FK Y+G D Sbjct: 44 SKQTYVMDRHTFNFFVENGFTFLVVAEEALGRLIPFAFLERVKDDFKHHYQGGRADLAV- 102
Query: 101 TLGAHFLDEEMVPIMQQH 48 +H LD E P +++H Sbjct: 103 ---SHSLDAEFGPKLKEH 117
>tr|A9P970|A9P970_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 221
Score = 42.7 bits (99), Expect = 0.009 Identities = 22/79 (27%), Positives = 43/79 (54%) Frame = -3
Query: 284 HSKFSHMTNQRRFICIIDGIFTYCAIIDEALSKAEAFSYLQKNRDAFKSLYKGRGPDSET 105 ++KF++ + F + D FTYC + DE+ + ++L++ +D F S Y G + Sbjct: 43 NNKFTYNCDGHTFNYLADNGFTYCVVADESAGRQVPMAFLERVKDDFVSKYGG----GKA 98
Query: 104 LTLGAHFLDEEMVPIMQQH 48 T A+ L++E P +++H Sbjct: 99 ATAQANGLNKEFGPKLKEH 117
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