BP921287
Clone id YMU001_000147_H11
Library
Length 445
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000147_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGGGGCCAACCACATCGAACATTTCAATATTTGAAAACTAGTTATTAATAGTTCGCCCGC
TAGAATAACCCCCTTCGAGTCTCTGTACCTATCCCGCTTTATTAGCGGATCTGATCACTA
CTCCACAACGTGGAACGGGATTTGGCTCAGGATTGCCTGCTGAATAATCCCAGGTTTCCC
TGAATCTGGGAGTTGCCACTTGATACGTTTCCATACCTAGGCTCAATCCGATTGAGTCCG
CTGCGTCTACCATTTCGCCATATCCCCACCTTTAGGCCCCAAGGAACCGCGAAGGAAAAT
ACCTAGATATTTCCTCATTATCGAAAGTTCAAAGTAATTTTGGTGCACTTTCCTTTTATT
TGTCAACTTGCTTCCATTCTATCCAGGTGAAAAGTCATCAAGTGGGAAAGATTAGCACAT
ATGTACAAATATGCGCATGTCTAAT
■■Homology search results ■■ -
sp_hit_id Q42435
Definition sp|Q42435|CCS_CAPAN Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum
Align length 23
Score (bit) 29.6
E-value 6.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921287|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_H11.
(445 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q42435|CCS_CAPAN Capsanthin/capsorubin synthase, chromoplast ... 30 6.0
sp|Q8G0E0|CDSA_BRUSU Phosphatidate cytidylyltransferase OS=Bruce... 29 7.7
sp|Q8YHH2|CDSA_BRUME Phosphatidate cytidylyltransferase OS=Bruce... 29 7.7
sp|Q08409|AUS1_YEAST ATP-dependent permease AUS1 OS=Saccharomyce... 29 10.0

>sp|Q42435|CCS_CAPAN Capsanthin/capsorubin synthase, chromoplast
OS=Capsicum annuum GN=CCS PE=2 SV=1
Length = 498

Score = 29.6 bits (65), Expect = 6.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2

Query: 77 ESLYLSRFISGSDHYSTTWNGIW 145
ESL +R I GS Y WNG+W
Sbjct: 383 ESLGSTRMIRGSQLYHRVWNGLW 405


>sp|Q8G0E0|CDSA_BRUSU Phosphatidate cytidylyltransferase OS=Brucella
suis GN=cdsA PE=3 SV=1
Length = 270

Score = 29.3 bits (64), Expect = 7.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3

Query: 302 VFSFAVPWGLKVGIWRNGRRSGLNRIEPRYGNVSSGNSQIQG 177
VF FAV W + + NGR G ++ PR+ + + I G
Sbjct: 132 VFLFAVVWSTDIAAYFNGRALGGPKLAPRFSPNKTWSGAIGG 173


>sp|Q8YHH2|CDSA_BRUME Phosphatidate cytidylyltransferase OS=Brucella
melitensis GN=cdsA PE=3 SV=2
Length = 270

Score = 29.3 bits (64), Expect = 7.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3

Query: 302 VFSFAVPWGLKVGIWRNGRRSGLNRIEPRYGNVSSGNSQIQG 177
VF FAV W + + NGR G ++ PR+ + + I G
Sbjct: 132 VFLFAVVWSTDIAAYFNGRALGGPKLAPRFSPNKTWSGAIGG 173


>sp|Q08409|AUS1_YEAST ATP-dependent permease AUS1 OS=Saccharomyces
cerevisiae GN=AUS1 PE=1 SV=1
Length = 1394

Score = 28.9 bits (63), Expect = 10.0
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3

Query: 204 YVSIPRLNPIESAASTISPYPHL*APRNRE 293
YV IP+ + + S++S++S P+ +P N+E
Sbjct: 700 YVGIPKSHSVSSSSSSLSAVPYQISPSNKE 729


tr_hit_id Q7X9D8
Definition tr|Q7X9D8|Q7X9D8_MARQU ABRH15 (Fragment) OS=Marsilea quadrifolia
Align length 50
Score (bit) 63.5
E-value 1.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921287|Adiantum capillus-veneris mRNA, clone:
YMU001_000147_H11.
(445 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7X9D8|Q7X9D8_MARQU ABRH15 (Fragment) OS=Marsilea quadrifolia... 64 1e-10
tr|B6YLV9|B6YLV9_9BACT Cystathionine gamma-synthase OS=Thermotog... 35 2.4
tr|A5GLC6|A5GLC6_SYNPW Predicted peptidase (U32 family) OS=Synec... 33 9.1

>tr|Q7X9D8|Q7X9D8_MARQU ABRH15 (Fragment) OS=Marsilea quadrifolia
PE=2 SV=1
Length = 92

Score = 63.5 bits (153), Expect(2) = 1e-10
Identities = 34/50 (68%), Positives = 34/50 (68%)
Frame = -1

Query: 280 GA*RWGYGEMVDAADSIGLSLGMETYQVATPRFRETWDYSAGNPEPNPVP 131
G R GYG MVDAAD I LSL MET QV RFR T DY AGNPEPN P
Sbjct: 1 GPTRGGYGGMVDAADLIRLSLSMETDQVTALRFRGTQDYFAGNPEPNLAP 50



Score = 25.4 bits (54), Expect(2) = 1e-10
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3

Query: 98 SGIGTETRRGLF*R 57
SGIGTETRR LF R
Sbjct: 59 SGIGTETRRELFQR 72


>tr|B6YLV9|B6YLV9_9BACT Cystathionine gamma-synthase
OS=Thermotogales bacterium TBF 19.5.1 GN=KoleDRAFT_1310
PE=4 SV=1
Length = 395

Score = 34.7 bits (78), Expect = 2.4
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3

Query: 183 NLGVAT*YVSIPRLNPIESAASTISPYPHL*APRNREGKYLDISSLSKVQSNFG 344
N G+ T YV++ L +E + + + +L P N + +DI+ LSK+ N+G
Sbjct: 124 NYGIITRYVNMSDLKQVEKSITPKTKVLYLETPTNPSLEIIDIAELSKIARNYG 177


>tr|A5GLC6|A5GLC6_SYNPW Predicted peptidase (U32 family)
OS=Synechococcus sp. (strain WH7803) GN=SynWH7803_1315
PE=4 SV=1
Length = 854

Score = 32.7 bits (73), Expect = 9.1
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1

Query: 238 DSIGLSLGMETYQVATPRFRETWDYSAGNPEPNPVPRCGVVIRSANKAG*VQRLEGGYSS 59
D+ GL G + + P++ TW AG P +V+R V LEG +SS
Sbjct: 386 DARGLLPGAPVWLTSDPQWHSTWTRRAGRQTPPQEAPLSLVVRGRIGEPLVLELEGAHSS 445

Query: 58 G 56
G
Sbjct: 446 G 446