BP921288
Clone id YMU001_000148_A01
Library
Length 216
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGCACCCAAAATGCCGAAATCCAGTTTATAGGTAGGATAAGTGACCAACTGCATACAAA
GGATATACCCAGAGTTACATCCAGACAATCATCTCCAGCCTCAGAAAATGTTTCCTTTAA
AGTCTGACTTACCAACACGCTGATGCCTCCTCATGTTCATGTTTCAATAGTATTACTGGA
CAGGCGAAGCGCCGGGAGAGATTTTATCTCCTCTCT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921288|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_A01.
(216 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A7QUH6
Definition tr|A7QUH6|A7QUH6_VITVI Chromosome undetermined scaffold_178, whole genome shotgun sequence OS=Vitis vinifera
Align length 16
Score (bit) 35.4
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921288|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_A01.
(216 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QUH6|A7QUH6_VITVI Chromosome undetermined scaffold_178, who... 35 0.16
tr|A7PJ62|A7PJ62_VITVI Chromosome chr12 scaffold_18, whole genom... 35 0.26
tr|A5BQT6|A5BQT6_VITVI Putative uncharacterized protein OS=Vitis... 35 0.26
tr|A9RGC6|A9RGC6_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.5
tr|Q4PL84|Q4PL84_ARATH Putative uncharacterized protein OS=Arabi... 31 6.9
tr|Q4PL83|Q4PL83_ARATH Putative uncharacterized protein OS=Arabi... 31 7.0
tr|Q0IR50|Q0IR50_ORYSJ Os11g0677500 protein OS=Oryza sativa subs... 29 8.4
tr|B8BII2|B8BII2_ORYSI Putative uncharacterized protein OS=Oryza... 29 8.9
tr|Q2QZQ0|Q2QZQ0_ORYSJ Ribonucleases P/MRP protein subunit POP1 ... 29 8.9
tr|A3CDW7|A3CDW7_ORYSJ Putative uncharacterized protein OS=Oryza... 29 8.9

>tr|A7QUH6|A7QUH6_VITVI Chromosome undetermined scaffold_178, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00006851001 PE=4 SV=1
Length = 634

Score = 35.4 bits (80), Expect(2) = 0.16
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -1

Query: 48 WSLILPINWISAFWVP 1
WS+ILP++W+ AFW+P
Sbjct: 371 WSIILPLSWVKAFWIP 386



Score = 22.3 bits (46), Expect(2) = 0.16
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -2

Query: 185 ACPVILLKHEHEEASACW 132
+CP++LLK+ +++ W
Sbjct: 354 SCPILLLKNNNQKGMIGW 371


>tr|A7PJ62|A7PJ62_VITVI Chromosome chr12 scaffold_18, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018608001
PE=4 SV=1
Length = 806

Score = 35.4 bits (80), Expect(2) = 0.26
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -1

Query: 48 WSLILPINWISAFWVP 1
WS+ILP++W+ AFW+P
Sbjct: 471 WSIILPLSWVKAFWIP 486



Score = 21.6 bits (44), Expect(2) = 0.26
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -2

Query: 185 ACPVILLKHEHEEASACW 132
+CP++LLK +++ W
Sbjct: 454 SCPILLLKSNNQKGMIGW 471


>tr|A5BQT6|A5BQT6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_012793 PE=4 SV=1
Length = 743

Score = 35.4 bits (80), Expect(2) = 0.26
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -1

Query: 48 WSLILPINWISAFWVP 1
WS+ILP++W+ AFW+P
Sbjct: 459 WSIILPLSWVKAFWIP 474



Score = 21.6 bits (44), Expect(2) = 0.26
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -2

Query: 185 ACPVILLKHEHEEASACW 132
+CP++LLK +++ W
Sbjct: 442 SCPILLLKSNNQKGMIGW 459


>tr|A9RGC6|A9RGC6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_65760 PE=4 SV=1
Length = 1055

Score = 34.7 bits (78), Expect = 2.5
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1

Query: 54 CSWSLILPINWISAFWVP 1
C +SLI+PI W+ AFWVP
Sbjct: 502 CGFSLIMPIAWVRAFWVP 519


>tr|Q4PL84|Q4PL84_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana GN=At2g47290 PE=2 SV=1
Length = 826

Score = 31.2 bits (69), Expect(2) = 6.9
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1

Query: 48 WSLILPINWISAFW 7
WSLILP++WI FW
Sbjct: 490 WSLILPLSWIKVFW 503



Score = 20.8 bits (42), Expect(2) = 6.9
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -2

Query: 185 ACPVILLKHE 156
+CP++LLKH+
Sbjct: 472 SCPLLLLKHK 481


>tr|Q4PL83|Q4PL83_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana GN=At2g47290 PE=2 SV=1
Length = 659

Score = 31.2 bits (69), Expect(2) = 7.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1

Query: 48 WSLILPINWISAFW 7
WSLILP++WI FW
Sbjct: 323 WSLILPLSWIKVFW 336



Score = 20.8 bits (42), Expect(2) = 7.0
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -2

Query: 185 ACPVILLKHE 156
+CP++LLKH+
Sbjct: 305 SCPLLLLKHK 314


>tr|Q0IR50|Q0IR50_ORYSJ Os11g0677500 protein OS=Oryza sativa subsp.
japonica GN=Os11g0677500 PE=4 SV=1
Length = 2381

Score = 29.3 bits (64), Expect(2) = 8.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1

Query: 48 WSLILPINWISAFW 7
WS+ILP++W+ FW
Sbjct: 341 WSVILPLSWVKPFW 354



Score = 22.3 bits (46), Expect(2) = 8.4
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2

Query: 185 ACPVILLKH 159
+CPVILLKH
Sbjct: 323 SCPVILLKH 331


>tr|B8BII2|B8BII2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_36989 PE=4 SV=1
Length = 914

Score = 29.3 bits (64), Expect(2) = 8.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1

Query: 48 WSLILPINWISAFW 7
WS+ILP++W+ FW
Sbjct: 503 WSVILPLSWVKPFW 516



Score = 22.3 bits (46), Expect(2) = 8.9
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2

Query: 185 ACPVILLKH 159
+CPVILLKH
Sbjct: 485 SCPVILLKH 493


>tr|Q2QZQ0|Q2QZQ0_ORYSJ Ribonucleases P/MRP protein subunit POP1
containing protein, expressed OS=Oryza sativa subsp.
japonica GN=LOC_Os11g45250 PE=4 SV=1
Length = 856

Score = 29.3 bits (64), Expect(2) = 8.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1

Query: 48 WSLILPINWISAFW 7
WS+ILP++W+ FW
Sbjct: 503 WSVILPLSWVKPFW 516



Score = 22.3 bits (46), Expect(2) = 8.9
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2

Query: 185 ACPVILLKH 159
+CPVILLKH
Sbjct: 485 SCPVILLKH 493


>tr|A3CDW7|A3CDW7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_033489 PE=4 SV=1
Length = 825

Score = 29.3 bits (64), Expect(2) = 8.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1

Query: 48 WSLILPINWISAFW 7
WS+ILP++W+ FW
Sbjct: 385 WSVILPLSWVKPFW 398



Score = 22.3 bits (46), Expect(2) = 8.9
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2

Query: 185 ACPVILLKH 159
+CPVILLKH
Sbjct: 367 SCPVILLKH 375