BP921289 |
Clone id |
YMU001_000148_A03 |
Library |
YMU01 |
Length |
518 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000148_A03. |
Accession |
BP921289 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1974Contig1 |
Sequence |
GATATTACCTGCAGGTACTCGAGTACCTGCGCTTTTGTTCCTCTTCCACAACATCCATGA TGTCAGCCACGAATAGCTTATCGACTCTCATCTGTCGTTTCATTCATGCTGACTGCTTCA GTGACTACCTTCCAGTCGGATGTTAAGCCCAATTCTCTTGTTGGATCCTCCAACAACCTT CTGAAGTCGAGGATCAACAGCCTGAATGAACAACTCAACCTTCTGATCCCTCATTGAACC TTGCTCCGAACTTTGCTCCGTCGAGGACAGTTGCTCGAATTTCTTCTCAAATTCCCATAA TAACTCTCGTGCAGATAGATTTTTTCTCTTCTTCTGCACCCACTTCATAAAGCTTTGCCT TGTTACTCTTTGTGAATCCTCAAGGAAGTATTCCTCCTGAAATGCCTTCTTGAAATCCTG CCAATTCGGGCCTTGAACTGCCTGAATTTCTTTAATTCAGTTCCTAAGTTCCAGCTCCGC AATTAAATGGAACCCTTCCACCGCATTCTGATCATGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8N7Z2 |
Definition |
sp|Q8N7Z2|GG6L1_HUMAN Golgin subfamily A member 6-like protein 1 OS=Homo sapiens |
Align length |
47 |
Score (bit) |
33.1 |
E-value |
0.8 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T3X3 |
Definition |
tr|A9T3X3|A9T3X3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
112 |
Score (bit) |
84.7 |
E-value |
2.0e-18 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921289|Adiantum capillus-veneris mRNA, clone: YMU001_000148_A03. (518 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T3X3|A9T3X3_PHYPA Predicted protein OS=Physcomitrella paten... 85 2e-18 tr|A9RKY7|A9RKY7_PHYPA Predicted protein OS=Physcomitrella paten... 83 2e-17 tr|A9SS06|A9SS06_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-17 tr|A9S3G8|A9S3G8_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-17 tr|A9S1P6|A9S1P6_PHYPA Predicted protein OS=Physcomitrella paten... 84 1e-16 tr|A9T9C2|A9T9C2_PHYPA Predicted protein OS=Physcomitrella paten... 80 1e-16 tr|A9RUP3|A9RUP3_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-16 tr|A9RAS6|A9RAS6_PHYPA Predicted protein OS=Physcomitrella paten... 77 3e-16 tr|A9SLX3|A9SLX3_PHYPA Predicted protein OS=Physcomitrella paten... 77 4e-16 tr|A9S3S0|A9S3S0_PHYPA Predicted protein OS=Physcomitrella paten... 78 4e-16 tr|A9U5C5|A9U5C5_PHYPA Predicted protein OS=Physcomitrella paten... 77 4e-16 tr|A9TKJ4|A9TKJ4_PHYPA Predicted protein OS=Physcomitrella paten... 79 7e-16 tr|A9RWG6|A9RWG6_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-15 tr|A9SZU1|A9SZU1_PHYPA Predicted protein OS=Physcomitrella paten... 81 2e-15 tr|A9TQP2|A9TQP2_PHYPA Predicted protein OS=Physcomitrella paten... 76 2e-15 tr|A9TU52|A9TU52_PHYPA Predicted protein OS=Physcomitrella paten... 74 3e-15 tr|A9RZA8|A9RZA8_PHYPA Predicted protein OS=Physcomitrella paten... 80 3e-15 tr|A9SRC0|A9SRC0_PHYPA Predicted protein OS=Physcomitrella paten... 75 4e-15 tr|A9TA76|A9TA76_PHYPA Predicted protein OS=Physcomitrella paten... 80 4e-15 tr|A9S7A3|A9S7A3_PHYPA Predicted protein OS=Physcomitrella paten... 74 5e-15 tr|A9T5E2|A9T5E2_PHYPA Predicted protein OS=Physcomitrella paten... 80 5e-15 tr|A9STE6|A9STE6_PHYPA Predicted protein OS=Physcomitrella paten... 81 5e-15 tr|A9U619|A9U619_PHYPA Predicted protein OS=Physcomitrella paten... 80 5e-15 tr|A9SQH0|A9SQH0_PHYPA Predicted protein OS=Physcomitrella paten... 80 5e-15 tr|A9SQ06|A9SQ06_PHYPA Predicted protein OS=Physcomitrella paten... 80 5e-15 tr|A9RD75|A9RD75_PHYPA Predicted protein OS=Physcomitrella paten... 78 6e-15 tr|A9RRY8|A9RRY8_PHYPA Predicted protein OS=Physcomitrella paten... 79 6e-15 tr|A9T1S7|A9T1S7_PHYPA Predicted protein OS=Physcomitrella paten... 79 6e-15 tr|A9U3C5|A9U3C5_PHYPA Predicted protein OS=Physcomitrella paten... 79 6e-15 tr|A9RQQ6|A9RQQ6_PHYPA Predicted protein OS=Physcomitrella paten... 80 6e-15
>tr|A9T3X3|A9T3X3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87748 PE=4 SV=1 Length = 707
Score = 84.7 bits (208), Expect(2) = 2e-18 Identities = 47/112 (41%), Positives = 66/112 (58%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L LELR+ IK I G W+DF +EEY LED++RVTR+SFM+WV Sbjct: 85 EKDMILTFELAVVLELRDHIKGIIKTHGDRWEDFILQLKEEYSLEDAERVTRKSFMEWVN 144
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K L A EL EFE++F ++ + KVELF+Q+ D LQ+ Sbjct: 145 KSNKELVATELFREFERQF----LQLSRVEKLTLENDKVELFLQSADNDLQR 192
Score = 30.4 bits (67), Expect(2) = 2e-18 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T++ GLT+DWK V EAV + Sbjct: 199 EDNTKDNGLTTDWKKVFEAVGI 220
>tr|A9RKY7|A9RKY7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_67516 PE=4 SV=1 Length = 760
Score = 83.2 bits (204), Expect(2) = 2e-17 Identities = 46/112 (41%), Positives = 65/112 (58%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L ELR IK+I G W+DF +EEY LED++RVTR+SFM+WV Sbjct: 39 EKDMILTFELAVVSELREHIKDIIKTHGDRWEDFVLQLKEEYSLEDAERVTRKSFMEWVN 98
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K L A ELL EFE++F ++ + KVELF+Q+ LQ+ Sbjct: 99 KSNKGLVATELLREFERQF----LQLSRVEKLTLENDKVELFLQSAGDDLQR 146
Score = 28.9 bits (63), Expect(2) = 2e-17 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T + GLT++WK V+EAV + Sbjct: 153 EDNTEDNGLTTNWKKVSEAVGI 174
>tr|A9SS06|A9SS06_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_83204 PE=4 SV=1 Length = 416
Score = 81.3 bits (199), Expect(2) = 2e-17 Identities = 45/112 (40%), Positives = 63/112 (56%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L ELR IKEI G W+DF + EY LED++RVTR+SFM+W+ Sbjct: 192 EKDMILTFQLAIVPELREHIKEIIKTHGEKWEDFTLQLKGEYSLEDAERVTRKSFMEWIN 251
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K L A EL EFE+KF ++ + KVELF+Q+ LQ+ Sbjct: 252 KSNKELVATELFQEFERKF----LQLSRVEKLTLENDKVELFLQSASNDLQR 299
Score = 30.8 bits (68), Expect(2) = 2e-17 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T + GLT+DWK V+EAV + Sbjct: 306 EDNTEDNGLTTDWKKVSEAVGI 327
>tr|A9S3G8|A9S3G8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74076 PE=4 SV=1 Length = 715
Score = 80.9 bits (198), Expect(2) = 2e-17 Identities = 46/112 (41%), Positives = 64/112 (57%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L ELR IK I G W+DF +EEY LED++RVTR+SFM+WV Sbjct: 85 EKDMILTFELAVVPELREYIKGIIKTHGDRWEDFILQLKEEYSLEDAERVTRKSFMEWVN 144
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K L A ELL EFE++F ++ + KVELF+Q+ LQ+ Sbjct: 145 KSNKGLVATELLREFERQF----LQLSRVEKLTLENDKVELFLQSAGDDLQR 192
Score = 30.8 bits (68), Expect(2) = 2e-17 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T + GLT+DWK V+EAV + Sbjct: 199 EDNTEDNGLTTDWKKVSEAVGI 220
>tr|A9S1P6|A9S1P6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_73305 PE=4 SV=1 Length = 831
Score = 83.6 bits (205), Expect(2) = 1e-16 Identities = 44/111 (39%), Positives = 66/111 (59%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 ++ VE F L LE+R+ I I G +W+DF A ++EYFLED+ RVT++ F+ W++ Sbjct: 66 EKKMVELFRLATILEIRDHITSITDRYGNSWEDFSHALKDEYFLEDTDRVTKKLFLGWIE 125
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQ 181 + KNL A ELL EFE+++ ++ KV+LF+QA D LQ Sbjct: 126 RPNKNLQATELLREFERQY----SQLSKVEKLTLEPNKVDLFLQAADGELQ 172
Score = 25.4 bits (54), Expect(2) = 1e-16 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED + GLT+ WK V +AV + Sbjct: 180 EDKEEDEGLTTKWKTVEDAVGL 201
>tr|A9T9C2|A9T9C2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_89784 PE=4 SV=1 Length = 750
Score = 80.1 bits (196), Expect(2) = 1e-16 Identities = 45/112 (40%), Positives = 65/112 (58%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L ELR+ IK I G W+DF +EEY LED++RVTR+SFM+WV Sbjct: 59 EKDMILTFELAVVPELRDHIKGIIKTHGDRWEDFILQLKEEYSLEDAERVTRKSFMEWVN 118
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K+L A EL EFE++F ++ + KVELF+Q+ LQ+ Sbjct: 119 KSNKDLVATELFREFERQF----LQLSRVKKLTLENDKVELFLQSASNDLQR 166
Score = 28.9 bits (63), Expect(2) = 1e-16 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED + GLT+DWK V+EAV + Sbjct: 173 EDNAEDNGLTTDWKKVSEAVGI 194
>tr|A9RUP3|A9RUP3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_70793 PE=4 SV=1 Length = 254
Score = 80.9 bits (198), Expect(2) = 2e-16 Identities = 45/112 (40%), Positives = 64/112 (57%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L+ E R IK I G W+DF +EEY LED++RVTR+SFM+WV Sbjct: 8 EKDMILTFELVVVPEFREHIKGIIKTHGDRWEDFILQLKEEYSLEDAERVTRKSFMEWVN 67
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K L A ELL EFE++F ++ + KVELF+Q+ LQ+ Sbjct: 68 KPNKRLVATELLREFERQF----LQLSRVEKLTLENDKVELFLQSAGNNLQR 115
Score = 27.7 bits (60), Expect(2) = 2e-16 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T + GLT++WK V++AV + Sbjct: 122 EDNTEDNGLTTNWKKVSQAVGI 143
>tr|A9RAS6|A9RAS6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_63637 PE=4 SV=1 Length = 315
Score = 77.4 bits (189), Expect(2) = 3e-16 Identities = 44/105 (41%), Positives = 60/105 (57%) Frame = -3
Query: 492 FHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQKKRKNLS 313 F L+ ELR IK I W+DF +EEY LED++RVTR+SFM+WV K K+L Sbjct: 92 FELVIVPELREHIKGIIRTHREKWEDFTLQLKEEYSLEDAKRVTRKSFMEWVNKSNKDLV 151
Query: 312 ARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 A EL EFE++ ++ + KVELF+Q+ D LQ+ Sbjct: 152 ATELFREFERQ----CLQLSRVEKLTLENDKVELFLQSADNDLQR 192
Score = 30.8 bits (68), Expect(2) = 3e-16 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T + GLT+DWK V+EAV + Sbjct: 199 EDNTEDNGLTTDWKKVSEAVGI 220
>tr|A9SLX3|A9SLX3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_81170 PE=4 SV=1 Length = 630
Score = 76.6 bits (187), Expect(2) = 4e-16 Identities = 44/112 (39%), Positives = 63/112 (56%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L ELR+ IK I G W+DF +EEY LED++RVTR+SFM+WV Sbjct: 39 EKDMILTFELAVVPELRDHIKGIIKTHGDRWEDFILQLKEEYSLEDAERVTRKSFMEWVN 98
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K L A ELL EFE++ ++ + VELF+Q+ LQ+ Sbjct: 99 KSNKGLVATELLREFERQL----LQLSRVEKLTLENDNVELFLQSAGNDLQR 146
Score = 30.8 bits (68), Expect(2) = 4e-16 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T + GLT+DWK V+EAV + Sbjct: 153 EDNTEDNGLTTDWKKVSEAVGI 174
>tr|A9S3S0|A9S3S0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74183 PE=4 SV=1 Length = 454
Score = 77.8 bits (190), Expect(2) = 4e-16 Identities = 41/112 (36%), Positives = 65/112 (58%) Frame = -3
Query: 513 DQNAVEGFHLIAELELRN*IKEIQAVQGPNWQDFKKAFQEEYFLEDSQRVTRQSFMKWVQ 334 +++ + F L+ ELR IKEI W+DF +EEY LED++++TR+SFM+W+ Sbjct: 42 EKDMILTFELVVVPELREHIKEIIKTHREKWEDFFLQLKEEYSLEDAEKMTRKSFMEWIN 101
Query: 333 KKRKNLSARELLWEFEKKFXXXXXXXXXXXXXSMRDQKVELFIQAVDPRLQK 178 K K+L A EL E+E++F ++ + KVELF+Q+ LQ+ Sbjct: 102 KSNKDLDATELFQEYEREF----LQLSRVEKLTLENNKVELFLQSAGNDLQR 149
Score = 29.6 bits (65), Expect(2) = 4e-16 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1
Query: 170 EDPTRELGLTSDWKVVTEAVSM 105 ED T + GLT+DWK V+EA+ + Sbjct: 156 EDNTEDNGLTTDWKKVSEAMGI 177
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