BP921293
Clone id YMU001_000148_A07
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGTACATCTAGAGTAACTTTTCTTTGAGCAAAACTACTGCTTGTTGGCCACGGTGTATCA
ATTTGTCTTGCCTCAAATGAGAGTTCTTTGTTTGTAAGGTAGGCAGCTAAGCTCGGCATT
AGGAAAGGGAGACAATGCTTGCAGTCAGTTGAGGAAAGGAACCAGTATTATATGTGCACT
ATGTCACAACAAGCAGCCTTCTGCATGGAATTTTTCAATTGGATGCCTTATGCTCACTGA
TACATCAGTTGGATGTAACACCTGCATTAAGAAGCGAAGCTTAAATCTGGTACAAACTAA
CCAAAACTTTTGCCACTGGTTGTGGGATATGAATTAACTAAACTTATTCCGCTGGTTGAC
AATGATCCCAAGAAGGACCCCATTGTAGAGCAGGAAGTATAGACCATAGTCAAGCAATTG
GTGGGTTTAGAGAACTC
■■Homology search results ■■ -
sp_hit_id Q8NZW7
Definition sp|Q8NZW7|SYGB_STRP8 Glycyl-tRNA synthetase beta subunit OS=Streptococcus pyogenes serotype M18
Align length 61
Score (bit) 31.2
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921293|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_A07.
(437 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NZW7|SYGB_STRP8 Glycyl-tRNA synthetase beta subunit OS=Stre... 31 2.0
sp|Q8K663|SYGB_STRP3 Glycyl-tRNA synthetase beta subunit OS=Stre... 31 2.0
sp|Q99YI4|SYGB_STRP1 Glycyl-tRNA synthetase beta subunit OS=Stre... 31 2.0
sp|Q925Q3|NCKX6_MOUSE Sodium/potassium/calcium exchanger 6 OS=Mu... 31 2.6
sp|P52385|PRTP_HHV7J Probable processing and transport protein O... 29 7.5
sp|Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana... 29 9.8

>sp|Q8NZW7|SYGB_STRP8 Glycyl-tRNA synthetase beta subunit
OS=Streptococcus pyogenes serotype M18 GN=glyS PE=3 SV=1
Length = 679

Score = 31.2 bits (69), Expect = 2.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3

Query: 96 KVGS*ARH*ERETMLAVS*GKEPVLYVHYVTTSSLLHGIFQLDALCSLIHQLDVTPALRS 275
K+GS A H +R ++A S KE L VT I++ D L ++ + D +
Sbjct: 353 KIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQGIMG 412

Query: 276 E 278
E
Sbjct: 413 E 413


>sp|Q8K663|SYGB_STRP3 Glycyl-tRNA synthetase beta subunit
OS=Streptococcus pyogenes serotype M3 GN=glyS PE=3 SV=2
Length = 679

Score = 31.2 bits (69), Expect = 2.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3

Query: 96 KVGS*ARH*ERETMLAVS*GKEPVLYVHYVTTSSLLHGIFQLDALCSLIHQLDVTPALRS 275
K+GS A H +R ++A S KE L VT I++ D L ++ + D +
Sbjct: 353 KIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQGIMG 412

Query: 276 E 278
E
Sbjct: 413 E 413


>sp|Q99YI4|SYGB_STRP1 Glycyl-tRNA synthetase beta subunit
OS=Streptococcus pyogenes serotype M1 GN=glyS PE=3 SV=1
Length = 679

Score = 31.2 bits (69), Expect = 2.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3

Query: 96 KVGS*ARH*ERETMLAVS*GKEPVLYVHYVTTSSLLHGIFQLDALCSLIHQLDVTPALRS 275
K+GS A H +R ++A S KE L VT I++ D L ++ + D +
Sbjct: 353 KIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQGIMG 412

Query: 276 E 278
E
Sbjct: 413 E 413


>sp|Q925Q3|NCKX6_MOUSE Sodium/potassium/calcium exchanger 6 OS=Mus
musculus GN=Slc24a6 PE=2 SV=2
Length = 585

Score = 30.8 bits (68), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3

Query: 168 LYVHYVTTSSLLHGIFQLDALCSLIHQLDVTPALRSEA 281
LYV YV T + ++Q SL+H + TP L SE+
Sbjct: 236 LYVFYVVTVIICTWVYQRQRSRSLVHSISETPELLSES 273


>sp|P52385|PRTP_HHV7J Probable processing and transport protein
OS=Human herpesvirus 7 (strain JI) GN=U40 PE=3 SV=1
Length = 721

Score = 29.3 bits (64), Expect = 7.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2

Query: 128 GDNACSQLRKGTSIICALCHNKQPSAWNFSIGCL 229
G NACSQ+ + +I+C +C +P ++ + CL
Sbjct: 157 GINACSQIIEFLTILCGVCVVMKPEVFSETTTCL 190


>sp|Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana
GN=CALS5 PE=1 SV=1
Length = 1923

Score = 28.9 bits (63), Expect = 9.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Frame = -3

Query: 306 FWLV--CTRFKLRFLMQV---LHPTDVSVSIRHPIEKFH 205
FWL+ C +F + +QV + PT+ +SIRH K+H
Sbjct: 667 FWLLLFCCKFAFSYFLQVKLLVKPTNAIMSIRHVKYKWH 705


tr_hit_id A7NN24
Definition tr|A7NN24|A7NN24_ROSCS Cyclic nucleotide-binding protein OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
Align length 45
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921293|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_A07.
(437 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7NN24|A7NN24_ROSCS Cyclic nucleotide-binding protein OS=Rose... 34 4.1

>tr|A7NN24|A7NN24_ROSCS Cyclic nucleotide-binding protein
OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
GN=Rcas_2894 PE=4 SV=1
Length = 482

Score = 33.9 bits (76), Expect = 4.1
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +2

Query: 134 NACSQLRKGTSIICALCHNKQPSAWNFSIGCLMLTDTSVGCNTCI 268
NAC Q R G C + WN S G LM+TD GC C+
Sbjct: 359 NACRQCRVGAE--CVEACPEDAIVWNDS-GALMITDACTGCGECV 400