BP921296 |
Clone id |
YMU001_000148_A12 |
Library |
YMU01 |
Length |
535 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000148_A12. |
Accession |
BP921296 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
AGGTACTCACCGATAACCACCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAAC AAGGGGCAGTACGGGAATATTAACCCGTTGTCCATCAACTACGCCTCTCGGACTGATCTT AGGACCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAACCCTTAGGTGTTCGGGGCA TTGGATTCTCACCAATGTTTTCGTTACTCAAGCCGACATTCTCGCTTCCGTTTCGTCCAC ACCTGCTCGCACTGGTGCTTCCATCTGGGGCGGAACGCTCCCCTACCGATGTTTTTTGAC ATCCCACAGCTTCGGCAGACCGCTTAGTCCCGCTCATCTTCGGCGCAAGAGCGCTTGATC AGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACTTCCTGGCTGTCT TTGCACTCCTACCTCCTTTACCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCTGG GCTGTTCCCCTCTCGACGGTGAAGCTTATCCCTCATCGTCTCACTGGTTGACCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q80WV7 |
Definition |
sp|Q80WV7|SRR2L_MOUSE SRRM2-like protein OS=Mus musculus |
Align length |
123 |
Score (bit) |
32.7 |
E-value |
1.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9RXQ4 |
Definition |
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans |
Align length |
135 |
Score (bit) |
114.0 |
E-value |
4.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921296|Adiantum capillus-veneris mRNA, clone: YMU001_000148_A12. (535 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deino... 114 4e-24 tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deino... 109 1e-22 tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa s... 100 5e-20 tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69 ... 100 6e-20 tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medic... 95 2e-18 tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkh... 80 5e-14 tr|Q6AV58|Q6AV58_ORYSJ Putative uncharacterized protein OSJNBb01... 60 9e-13 tr|A7QEC9|A7QEC9_VITVI Chromosome chr1 scaffold_84, whole genome... 72 2e-11 tr|A7QYC6|A7QYC6_VITVI Chromosome undetermined scaffold_244, who... 67 8e-10 tr|B1N6J8|B1N6J8_9PROT Putative uncharacterized protein OS=uncul... 60 9e-08 tr|B0PCK9|B0PCK9_9FIRM Putative uncharacterized protein OS=Anaer... 49 1e-07 tr|B0P654|B0P654_9FIRM Putative uncharacterized protein OS=Anaer... 49 1e-07 tr|B0PBI2|B0PBI2_9FIRM Putative uncharacterized protein OS=Anaer... 48 2e-07 tr|B0TIE5|B0TIE5_HELMI Putative uncharacterized protein OS=Helio... 57 8e-07 tr|Q0JIM3|Q0JIM3_ORYSJ Photosystem I P700 chlorophyll A apoprote... 55 2e-06 tr|B0MGK2|B0MGK2_9FIRM Putative uncharacterized protein OS=Anaer... 43 1e-05 tr|A8R9P7|A8R9P7_9FIRM Putative uncharacterized protein OS=Eubac... 49 1e-04 tr|A8R9Q0|A8R9Q0_9FIRM Putative uncharacterized protein OS=Eubac... 49 2e-04 tr|A1XNB2|A1XNB2_VICSA Putative cysteine synthase Voas-tl5 OS=Vi... 46 0.001 tr|B7R8W2|B7R8W2_9THEO Putative uncharacterized protein OS=Carbo... 45 0.002 tr|A5KRD2|A5KRD2_9FIRM Putative uncharacterized protein OS=Rumin... 42 0.003 tr|A5KP23|A5KP23_9FIRM Putative uncharacterized protein OS=Rumin... 42 0.003 tr|A5KL04|A5KL04_9FIRM Putative uncharacterized protein OS=Rumin... 42 0.003 tr|A5Z498|A5Z498_9FIRM Putative uncharacterized protein OS=Eubac... 45 0.003 tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea ... 44 0.004 tr|B0MI56|B0MI56_9FIRM Putative uncharacterized protein (Fragmen... 40 0.013 tr|A1HM07|A1HM07_9FIRM Putative uncharacterized protein OS=Therm... 41 0.044 tr|A1SQU2|A1SQU2_NOCSJ Putative uncharacterized protein OS=Nocar... 37 0.85 tr|Q4Q6C1|Q4Q6C1_LEIMA Putative uncharacterized protein OS=Leish... 35 1.9 tr|Q7QGD7|Q7QGD7_ANOGA AGAP009362-PA (Fragment) OS=Anopheles gam... 35 3.2
>tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans GN=DR_0254 PE=4 SV=1 Length = 139
Score = 114 bits (284), Expect = 4e-24 Identities = 70/135 (51%), Positives = 77/135 (57%), Gaps = 3/135 (2%) Frame = +2
Query: 74 GILTRCPSTTPLGLILGPDSPSVDEPCGGTLRCSGHWILTNVFVTQADILASVSSTPART 253 GILT CPS P GL LGPD P D+P GTL + ILT+ VT A I SV ST Sbjct: 5 GILTCCPSAAPFGLTLGPDFPWADDPSPGTLVLTAKKILTSFIVTHAGIRTSVGSTTPSG 64
Query: 254 GASIWGGTLPYRCFLT---SHSFGRPLSPAHLRRKSA*SVSYYALFQGWLLLGKLPGCLC 424 AS P R + S + LSP H RR VSYYALF+GWLLL + PGCLC Sbjct: 65 MASPRTERSPTRQLASRVESIASVDHLSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLC 124
Query: 425 TPTSFTTERSFRGLS 469 TS TTERSFR LS Sbjct: 125 DDTSLTTERSFRDLS 139
>tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans GN=DR_2252 PE=4 SV=1 Length = 133
Score = 109 bits (272), Expect = 1e-22 Identities = 67/133 (50%), Positives = 75/133 (56%), Gaps = 3/133 (2%) Frame = +2
Query: 80 LTRCPSTTPLGLILGPDSPSVDEPCGGTLRCSGHWILTNVFVTQADILASVSSTPARTGA 259 +T CPS P GL LGPD P D+P GTL + ILT+ VT A I SV ST A Sbjct: 1 MTCCPSAAPFGLTLGPDFPWADDPSPGTLVLTAKKILTSFIVTHAGIRTSVGSTTPSGMA 60
Query: 260 SIWGGTLPYRCFLT---SHSFGRPLSPAHLRRKSA*SVSYYALFQGWLLLGKLPGCLCTP 430 S P R + S + LSP H RR VSYYALF+GWLLL + PGCLC Sbjct: 61 SPRTERSPTRQLASRVESIASVDHLSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDD 120
Query: 431 TSFTTERSFRGLS 469 TS TTERSFR LS Sbjct: 121 TSLTTERSFRDLS 133
>tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa subsp. indica PE=4 SV=1 Length = 109
Score = 100 bits (249), Expect = 5e-20 Identities = 48/53 (90%), Positives = 49/53 (92%) Frame = -2
Query: 531 STSETMRDKLHRREGNSPDHQLRPLNDRSVVKEVGVQRQPGSLPRSSHP*KSA 373 S SETM DKLHRREGNSPDHQLRPLNDRSV+KEVGVQRQPG LPRSSHP KSA Sbjct: 57 SASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109
>tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69 (Fragment) OS=Phillyrea latifolia GN=ophh-69 PE=2 SV=1 Length = 166
Score = 100 bits (248), Expect = 6e-20 Identities = 49/67 (73%), Positives = 54/67 (80%) Frame = -1
Query: 334 SGTKRSAEAVGCQKTSVGERSAPDGSTSASRCGRNGSENVGLSNENIGENPMPRTPKGSS 155 +G + AVGC+ TSVGERSA +GS AS GR+GSENVGLSN NIGENPMPR PKGSS Sbjct: 100 AGDVQGCRAVGCKNTSVGERSALEGSPRASSGGRSGSENVGLSNANIGENPMPRKPKGSS 159
Query: 154 ARFVHGG 134 ARFVHGG Sbjct: 160 ARFVHGG 166
Score = 95.9 bits (237), Expect = 1e-18 Identities = 48/63 (76%), Positives = 52/63 (82%) Frame = -1
Query: 310 AVGCQKTSVGERSAPDGSTSASRCGRNGSENVGLSNENIGENPMPRTPKGSSARFVHGG* 131 AVGC+ TSVGERSA +GS S GR+GSENVGLSN NIGENPMPR PKGSSA FVHGG Sbjct: 3 AVGCKNTSVGERSALEGSPRVSSGGRSGSENVGLSNANIGENPMPRKPKGSSAWFVHGGS 62
Query: 130 VRS 122 VR+ Sbjct: 63 VRA 65
>tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 102
Score = 95.1 bits (235), Expect = 2e-18 Identities = 44/49 (89%), Positives = 45/49 (91%) Frame = -2
Query: 531 STSETMRDKLHRREGNSPDHQLRPLNDRSVVKEVGVQRQPGSLPRSSHP 385 S SE M DKLHRREGNSPDHQLRPLNDRSV+KEVGVQRQPG LPRSSHP Sbjct: 54 SASEAMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP 102
>tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=BMULJ_05092 PE=4 SV=1 Length = 123
Score = 80.5 bits (197), Expect = 5e-14 Identities = 51/123 (41%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = +2
Query: 80 LTRCPSTTPLGLILGPDSPSVDEPCGGTLRCSGHWILTNVFVTQADILASVSSTPARTGA 259 +T PS T L LG DSP DE C G L + T T I S +S+ Sbjct: 1 MTCFPSATHFCLALGADSPYADERCVGNLGLTARGPFTPFIATHVSIRTSDTSSTLYKAP 60
Query: 260 SIWGGTLPYR-CFLTSHSFGRPLSPAHLRRKSA*SVSYYALFQGWLLLGKLPGCLCTPTS 436 S GTL Y C S + L+P HL R++ SVSYYA F+GWLLL + P C PTS Sbjct: 61 SQAYGTLSYHACKHASAASVYGLAPLHLPRRTTRSVSYYAFFKGWLLLSQPPDCFSLPTS 120
Query: 437 FTT 445 F T Sbjct: 121 FPT 123
>tr|Q6AV58|Q6AV58_ORYSJ Putative uncharacterized protein OSJNBb0101N11.3 OS=Oryza sativa subsp. japonica GN=OSJNBb0101N11.3 PE=4 SV=1 Length = 245
Score = 60.1 bits (144), Expect(2) = 9e-13 Identities = 28/33 (84%), Positives = 30/33 (90%) Frame = -2
Query: 123 PKISPRGVVDGQRVNIPVLPLVGPEGRRRLG*P 25 PKI P+GVVDGQ+VNIPVLPLVG EGRRRLG P Sbjct: 142 PKIRPKGVVDGQQVNIPVLPLVGTEGRRRLGKP 174
Score = 36.2 bits (82), Expect(2) = 9e-13 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -1
Query: 301 CQKTSVGERSAPDGSTSASRCGRNGSENVGL 209 C+K + GERSA +GS S R+GSENVGL Sbjct: 110 CRKQAEGERSALEGSNRESGGRRSGSENVGL 140
>tr|A7QEC9|A7QEC9_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036955001 PE=4 SV=1 Length = 243
Score = 72.0 bits (175), Expect = 2e-11 Identities = 33/36 (91%), Positives = 35/36 (97%) Frame = -2
Query: 138 EGESGPKISPRGVVDGQRVNIPVLPLVGPEGRRRLG 31 EGESGPKI P+GVVDGQ+VNIPVLPLVGPEGRRRLG Sbjct: 208 EGESGPKIRPKGVVDGQQVNIPVLPLVGPEGRRRLG 243
>tr|A7QYC6|A7QYC6_VITVI Chromosome undetermined scaffold_244, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009678001 PE=4 SV=1 Length = 114
Score = 66.6 bits (161), Expect = 8e-10 Identities = 40/79 (50%), Positives = 46/79 (58%) Frame = -1
Query: 370 IAH*SSALAPKMSGTKRSAEAVGCQKTSVGERSAPDGSTSASRCGRNGSENVGLSNENIG 191 I H ++ PK+ K + SVGERSA +GST ASR + N NIG Sbjct: 46 INHRGFSILPKLWDVKS-------KNASVGERSALEGSTRASRRVDEAEARI---NANIG 95
Query: 190 ENPMPRTPKGSSARFVHGG 134 ENPMPR PKGSSARFVHGG Sbjct: 96 ENPMPRKPKGSSARFVHGG 114
>tr|B1N6J8|B1N6J8_9PROT Putative uncharacterized protein OS=uncultured beta proteobacterium CBNPD1 BAC clone 578 PE=4 SV=1 Length = 109
Score = 59.7 bits (143), Expect = 9e-08 Identities = 42/106 (39%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Frame = +2
Query: 71 TGILTRCPSTTPLGLILGPDSPSVDEPCGGTLRCSGHWILTNVFVTQADILASVSSTPAR 250 TGILT PS T L L LG DSP DE C G L + + T T I S +S+ Sbjct: 4 TGILTCFPSATHLCLALGADSPYADERCVGNLALTARGLFTPFNATHVSIRTSDTSSRLH 63
Query: 251 TGASIWGGTLPYRCF-LTSHSFGRPLSPAHLRRKSA*SVSYYALFQ 385 S TL Y S + L+P HL R++ SVSYYA F+ Sbjct: 64 NPPSQAYRTLSYHAHCCASAASVTGLAPLHLPRRTTRSVSYYAFFK 109
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