BP921305 |
Clone id |
YMU001_000148_B11 |
Library |
YMU01 |
Length |
400 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000148_B11. |
Accession |
BP921305 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2654Contig1 |
Sequence |
CTTCAATAAAAGTGGCTCAATCTTGTTTCGCAATTCATTTGAACTTTCTTTTAACTCTGT GAGTAGCCCCACTAATTCGGGTGCGTCACTCATGACAACATTCATGTGTTCTTCTTTTGA TAAAGCGCTCACATCTTTCTTCACTTCTTCAACAAGTATACTTGCATCTTTGGCCGATAC ATCCAAACGCCCTCTTTTTGATAAGTAACTCTTACTTCGCTGATTCTCTTTTGCTTCTGC CTTTGCAACAACATCCTGCAACGAACTTTCATACTCCTTTGCCGAATTCTCTTCTTCATC TAAGTCCAAATCAAAATGCTCAGGACGTAGCTTTTCTGCCATTTGGCGTTGGAGCCTAAG AGCCTCAGCTTCCTCCTCTGCAGGCACCTCTTCATCACTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9NQZ2 |
Definition |
sp|Q9NQZ2|SAS10_HUMAN Something about silencing protein 10 OS=Homo sapiens |
Align length |
109 |
Score (bit) |
40.0 |
E-value |
0.004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RZ66 |
Definition |
tr|A9RZ66|A9RZ66_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
119 |
Score (bit) |
89.7 |
E-value |
6.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921305|Adiantum capillus-veneris mRNA, clone: YMU001_000148_B11. (400 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RZ66|A9RZ66_PHYPA Predicted protein OS=Physcomitrella paten... 90 6e-17 tr|A7QAR6|A7QAR6_VITVI Chromosome chr5 scaffold_72, whole genome... 77 3e-13 tr|Q8L3P4|Q8L3P4_ARATH Putative uncharacterized protein At2g4365... 74 4e-12 tr|Q0WVP9|Q0WVP9_ARATH Putative uncharacterized protein At2g4365... 74 4e-12 tr|O22838|O22838_ARATH Putative uncharacterized protein At2g4365... 74 4e-12 tr|A8J0A9|A8J0A9_CHLRE Predicted protein (Fragment) OS=Chlamydom... 66 7e-10 tr|Q01DT6|Q01DT6_OSTTA Leucine zipper factor-like (ISS) OS=Ostre... 48 3e-04 tr|Q657Z6|Q657Z6_ORYSJ cDNA clone:J013109E04, full insert sequen... 47 5e-04 tr|B8ACS9|B8ACS9_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|A2ZNB2|A2ZNB2_ORYSJ Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|A4HGB3|A4HGB3_LEIBR Putative uncharacterized protein OS=Leish... 47 5e-04 tr|B0BMD8|B0BMD8_XENTR LOC100145025 protein OS=Xenopus tropicali... 47 6e-04 tr|Q4DMJ7|Q4DMJ7_TRYCR Putative uncharacterized protein OS=Trypa... 47 6e-04 tr|Q66I02|Q66I02_DANRE Zgc:92127 OS=Danio rerio GN=zgc:92127 PE=... 46 8e-04 tr|A4I3E7|A4I3E7_LEIIN Putative uncharacterized protein OS=Leish... 45 0.001 tr|B3S045|B3S045_TRIAD Putative uncharacterized protein OS=Trich... 45 0.002 tr|Q4RX59|Q4RX59_TETNG Chromosome 11 SCAF14979, whole genome sho... 44 0.003 tr|Q23DB4|Q23DB4_TETTH Putative uncharacterized protein OS=Tetra... 44 0.003 tr|Q55CP1|Q55CP1_DICDI U3 snoRNP protein OS=Dictyostelium discoi... 44 0.004 tr|Q4Q8J7|Q4Q8J7_LEIMA Putative uncharacterized protein OS=Leish... 44 0.004 tr|Q384L4|Q384L4_9TRYP Putative uncharacterized protein OS=Trypa... 42 0.020 tr|B7TJ07|B7TJ07_PIG UTP3 small subunit processome component OS=... 41 0.026 tr|A2EXX1|A2EXX1_TRIVA Putative uncharacterized protein OS=Trich... 41 0.026 tr|A9RBW0|A9RBW0_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.034 tr|A2EU36|A2EU36_TRIVA Putative uncharacterized protein OS=Trich... 41 0.034 tr|Q7LZ90|Q7LZ90_TORCA Neurofilament triplet M protein (Fragment... 40 0.044 tr|B6XYD4|B6XYD4_ANATH Chromosome segregation protein SMC OS=Ana... 40 0.044 tr|B6K9X0|B6K9X0_TOXGO Putative uncharacterized protein OS=Toxop... 40 0.044 tr|Q05DV3|Q05DV3_MOUSE Utp3 protein (Fragment) OS=Mus musculus G... 40 0.075 tr|Q05DC6|Q05DC6_MOUSE Utp3 protein (Fragment) OS=Mus musculus G... 40 0.075
>tr|A9RZ66|A9RZ66_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161921 PE=4 SV=1 Length = 625
Score = 89.7 bits (221), Expect = 6e-17 Identities = 55/119 (46%), Positives = 79/119 (66%) Frame = -2
Query: 357 RLQRQMAEKLRPEHFDLDLDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDV 178 +LQ+++A K+RPE ++ D +EE E E S +D AK E++ +++K +D Sbjct: 124 QLQKEIAAKMRPEDYNDDDSDEEGI--EGEESFEDA-AKKESQPKKKNKV-------VDK 173
Query: 177 SAKDASILVEEVKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1 D +I E+KKD++ALSKEE M V+MSDAPELVGL TEL+++ NELR K+ PLL K Sbjct: 174 MVTDGTI---ELKKDIAALSKEEQMEVLMSDAPELVGLTTELQDNLNELRTKVAPLLEK 229
>tr|A7QAR6|A7QAR6_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034656001 PE=4 SV=1 Length = 624
Score = 77.4 bits (189), Expect = 3e-13 Identities = 47/120 (39%), Positives = 72/120 (60%) Frame = -2
Query: 360 LRLQRQMAEKLRPEHFDLDLDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLD 181 +RLQR+ A+ L E F ++ ++ S + E ++++++ K + SKS + + Sbjct: 103 MRLQREKAKFLSMEDFGIEDANQDES--DGEPTMEEIMVKGKTT----SKSLADEEAK-- 154
Query: 180 VSAKDASILVEEVKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1 D EEVKKD++ALSKEE M+VV S APELVGLL+EL ++ +L K+ PLL K Sbjct: 155 ---DDTGTAYEEVKKDLNALSKEEQMDVVYSSAPELVGLLSELNDALEQLEGKVNPLLAK 211
>tr|Q8L3P4|Q8L3P4_ARATH Putative uncharacterized protein At2g43650 OS=Arabidopsis thaliana GN=At2g43650 PE=2 SV=1 Length = 654
Score = 73.9 bits (180), Expect = 4e-12 Identities = 47/120 (39%), Positives = 70/120 (58%) Frame = -2
Query: 360 LRLQRQMAEKLRPEHFDLDLDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLD 181 +RL+ + + LD D EE+S +E + + K Q +KS K+ + D Sbjct: 155 IRLRAEQLGSITAADAGLDDDSEEDSDREL------TMEEISDKGKQATKSITDKKEKGD 208
Query: 180 VSAKDASILVEEVKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1 KD VEE+KKD+++LSKEE M+VV S APE+VGLL+EL ++ EL +KI P++ K Sbjct: 209 ---KDTH--VEEIKKDINSLSKEEQMDVVYSSAPEIVGLLSELNDAVEELESKINPVMNK 263
>tr|Q0WVP9|Q0WVP9_ARATH Putative uncharacterized protein At2g43650 (Fragment) OS=Arabidopsis thaliana GN=At2g43650 PE=2 SV=1 Length = 383
Score = 73.9 bits (180), Expect = 4e-12 Identities = 47/120 (39%), Positives = 70/120 (58%) Frame = -2
Query: 360 LRLQRQMAEKLRPEHFDLDLDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLD 181 +RL+ + + LD D EE+S +E + + K Q +KS K+ + D Sbjct: 155 IRLRAEQLGSITAADAGLDDDSEEDSDREL------TMEEISDKGKQATKSITDKKEKGD 208
Query: 180 VSAKDASILVEEVKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1 KD VEE+KKD+++LSKEE M+VV S APE+VGLL+EL ++ EL +KI P++ K Sbjct: 209 ---KDTH--VEEIKKDINSLSKEEQMDVVYSSAPEIVGLLSELNDAVEELESKINPVMNK 263
>tr|O22838|O22838_ARATH Putative uncharacterized protein At2g43650 OS=Arabidopsis thaliana GN=At2g43650 PE=4 SV=1 Length = 520
Score = 73.9 bits (180), Expect = 4e-12 Identities = 47/120 (39%), Positives = 70/120 (58%) Frame = -2
Query: 360 LRLQRQMAEKLRPEHFDLDLDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLD 181 +RL+ + + LD D EE+S +E + + K Q +KS K+ + D Sbjct: 155 IRLRAEQLGSITAADAGLDDDSEEDSDREL------TMEEISDKGKQATKSITDKKEKGD 208
Query: 180 VSAKDASILVEEVKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNELRNKIEPLLLK 1 KD VEE+KKD+++LSKEE M+VV S APE+VGLL+EL ++ EL +KI P++ K Sbjct: 209 ---KDTH--VEEIKKDINSLSKEEQMDVVYSSAPEIVGLLSELNDAVEELESKINPVMNK 263
>tr|A8J0A9|A8J0A9_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_148919 PE=4 SV=1 Length = 341
Score = 66.2 bits (160), Expect = 7e-10 Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 3/121 (2%) Frame = -2
Query: 360 LRLQRQMAEKLRPEHFDLDLDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLD 181 L LQR+ A KL F LD +++E+ ++ E +D +A +K +K G+ Sbjct: 172 LALQREGAAKLAAADFGLDSEDDEDEDEDEEEEDEDEEGRATMAA--LAKGAGAKGGKKA 229
Query: 180 VSAKDAS---ILVEEVKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNELRNKIEPL 10 K+A + VE V +D+SAL E + +++DAPEL+ LL +L++S E+R+++ PL Sbjct: 230 GRGKEAGAGGVQVEAVARDLSALGDEARLQALLADAPELLSLLRDLQDSLGEVRHRVSPL 289
Query: 9 L 7 L Sbjct: 290 L 290
>tr|Q01DT6|Q01DT6_OSTTA Leucine zipper factor-like (ISS) OS=Ostreococcus tauri GN=Ot02g06420 PE=4 SV=1 Length = 856
Score = 47.8 bits (112), Expect = 3e-04 Identities = 36/117 (30%), Positives = 54/117 (46%) Frame = -2
Query: 357 RLQRQMAEKLRPEHFDLDLDEEENSAKEYESSLQDVVAKAEAKENQRSKSYLSKRGRLDV 178 R+++ MAE++R E D +D E +S E E +L A + R S S R Sbjct: 159 RMRKLMAEEMRAE--DFGVDNESDSESEEEFTLGAKAANLRRGDGARPSSKKSSR----- 211
Query: 177 SAKDASILVEEVKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNELRNKIEPLL 7 A + L E + + +A E +DAPELV L EL + N + +EPL+ Sbjct: 212 -AIEVETLTAEERAERTAAEDEA---AAANDAPELVALANELTSTLNAIEESVEPLV 264
>tr|Q657Z6|Q657Z6_ORYSJ cDNA clone:J013109E04, full insert sequence OS=Oryza sativa subsp. japonica GN=P0005A05.2 PE=2 SV=1 Length = 645
Score = 47.0 bits (110), Expect = 5e-04 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Frame = -2
Query: 306 DLDEEENSAKEYES--SLQDV-VAKAEAKENQRSKSYLSKRGRLDVSAKDASILVE---E 145 D +E KE ES S+QD + E+ E R+ K V D E + Sbjct: 146 DYEEARRIQKEEESKLSMQDFGLEDGESDEEDRA----IKASNHQVKVPDGEHSFETYVK 201
Query: 144 VKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNEL 31 +K++ + LS++E M V+ S APELVGLL+ELK++ EL Sbjct: 202 MKEEFAVLSRDEKMGVLDSSAPELVGLLSELKDAHEEL 239
>tr|B8ACS9|B8ACS9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00043 PE=4 SV=1 Length = 620
Score = 47.0 bits (110), Expect = 5e-04 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Frame = -2
Query: 306 DLDEEENSAKEYES--SLQDV-VAKAEAKENQRSKSYLSKRGRLDVSAKDASILVE---E 145 D +E KE ES S+QD + E+ E R+ K V D E + Sbjct: 146 DYEETRRIQKEEESKLSMQDFGLEDGESDEEDRA----IKASNHQVKVPDGEHSFETYVK 201
Query: 144 VKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNEL 31 +K++ + LS++E M V+ S APELVGLL+ELK++ EL Sbjct: 202 MKEEFAVLSRDEKMGVLDSSAPELVGLLSELKDAHEEL 239
>tr|A2ZNB2|A2ZNB2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000034 PE=4 SV=1 Length = 594
Score = 47.0 bits (110), Expect = 5e-04 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Frame = -2
Query: 306 DLDEEENSAKEYES--SLQDV-VAKAEAKENQRSKSYLSKRGRLDVSAKDASILVE---E 145 D +E KE ES S+QD + E+ E R+ K V D E + Sbjct: 133 DYEEARRIQKEEESKLSMQDFGLEDGESDEEDRA----IKASNHQVKVPDGEHSFETYVK 188
Query: 144 VKKDVSALSKEEHMNVVMSDAPELVGLLTELKESSNEL 31 +K++ + LS++E M V+ S APELVGLL+ELK++ EL Sbjct: 189 MKEEFAVLSRDEKMGVLDSSAPELVGLLSELKDAHEEL 226
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